prot_H-paniculata_contig14765.2845.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14765.2845.1
Unique Nameprot_H-paniculata_contig14765.2845.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length462
Homology
BLAST of mRNA_H-paniculata_contig14765.2845.1 vs. uniprot
Match: D8LL59_ECTSI (Bromo domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL59_ECTSI)

HSP 1 Score: 203 bits (517), Expect = 1.380e-54
Identity = 106/234 (45.30%), Postives = 140/234 (59.83%), Query Frame = 0
Query:   34 EDRLSHVTICSICETFALEEDVVVLCRNCPRTFCCACAR----SSAIETETPPAVMRIGPSRCGGHLETNRCPSCLHRRDEHFSAPLPGAKPMEHLVEALLKHDLSHAFRAPVDSTEYPDYVYRIGRNHMMDLQTMVEKLREGKYSSRRGRGTFKQDLNKIWRNCRFYADCDEQGVPLDETTVPGIVRCALILEKMANRFYTTHMRD-QTGVVVPDTSWDGWRQARQLENEQAR 262
            EDR SH+  C+ C+    E D +  C  CPR+FC  C         +E E      R   +   G +   RCP C   +D  F+ P PG  PM+HL+  LL+HDLS  FR PVD  ++PDYV  IGRN MMDL TM+ KL+  +Y  RRG G F++DLN+IWRNCR +A CDE G P    TVPGIVRCAL LE M+++F +++M D Q      +++WD  RQ ++ EN +AR
Sbjct:  331 EDRSSHLMDCASCQHSLPEGDPIGRCERCPRSFCSQCLERGLVEQGVELEALGQDCRSLLNGKQGDISIARCPECFRGKDNEFAPPPPGGAPMDHLLSELLRHDLSLCFREPVDIVKHPDYVESIGRNAMMDLGTMLSKLQGKRYPRRRGPGQFQEDLNRIWRNCRRFAGCDELGRPHYGNTVPGIVRCALTLEAMSDKFISSYMSDNQETAAWQESTWDFHRQRQERENAEAR 564          
BLAST of mRNA_H-paniculata_contig14765.2845.1 vs. uniprot
Match: A0A2H3J790_WOLCO (Bromo domain-containing protein n=1 Tax=Wolfiporia cocos (strain MD-104) TaxID=742152 RepID=A0A2H3J790_WOLCO)

HSP 1 Score: 60.5 bits (145), Expect = 4.830e-6
Identity = 39/116 (33.62%), Postives = 58/116 (50.00%), Query Frame = 0
Query:  135 SHAFRAPVDSTEYPDYVYRIGRNHMMDLQTMVEKLREGKYSSRRGRGTFKQDLNKIWRNCRFYADCD-----EQGVPLDETTVPGIVRCALILEKMANRFYT--THMRDQTGVVVP 243
            + AF  PV   E PDY   I   H MDLQTM++K+++ +Y S++    FK DL+ IW NC  Y   +      + +P D T    + +CA  L   A R     T  +++   V+P
Sbjct:    9 AEAFLKPVSRIEVPDYYDVIA--HPMDLQTMLKKVKQKQYKSKK---EFKDDLDLIWNNCYQYNAAEVHPPASRQIPADHTQNHPLRQCATRLRAKAERLLANITDYKERADPVIP 119          
BLAST of mRNA_H-paniculata_contig14765.2845.1 vs. uniprot
Match: A0A4S4N0P3_9APHY (Bromo domain-containing protein n=1 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4N0P3_9APHY)

HSP 1 Score: 57.8 bits (138), Expect = 3.500e-5
Identity = 40/111 (36.04%), Postives = 54/111 (48.65%), Query Frame = 0
Query:  135 SHAFRAPVDSTEYPDYVYRIGRNHMMDLQTMVEKLREGKYSSRRGRGTFKQDLNKIWRNCRFYADCDEQGVPLDETTVPGIVRCALILEKMANRF--YTTHMRDQTGVVVP 243
            + AF  PV  TEYPDY   I     MDLQTM+ K++   Y S+R    F+ DL+ IW NC  Y   +   + L          CA  L+  A R   Y T  +D+T  ++P
Sbjct:   65 AEAFLKPVPKTEYPDYFDVI--TTPMDLQTMLRKVKNKAYKSKR---EFQDDLDLIWSNCFEYNATENHPLRL----------CATRLKDKATRLLKYITDRKDRTDPLIP 160          
BLAST of mRNA_H-paniculata_contig14765.2845.1 vs. uniprot
Match: A0A067NJZ4_PLEOS (Bromo domain-containing protein n=2 Tax=Pleurotus ostreatus TaxID=5322 RepID=A0A067NJZ4_PLEOS)

HSP 1 Score: 57.4 bits (137), Expect = 4.670e-5
Identity = 46/136 (33.82%), Postives = 63/136 (46.32%), Query Frame = 0
Query:  119 AKPMEHLVEALLKHDL---------SHAFRAPVDSTEYPDYVYRIGRNHMMDLQTMVEKLREGKYSSRRGRGTFKQDLNKIWRNCRFYADCDEQGVPLDETTVPGIVRCALILEKMANRFYT--THMRDQTGVVVP 243
            A P    +E LL HDL         + AF  PV+ +E PDY   I     MDLQTM+ K+++  Y S+R    FK DL+ IW NCR Y   +   + L          CA  L+  A R     T  +++T   +P
Sbjct:   41 ADPFYESLEGLL-HDLRTITIDNRDAEAFLRPVNRSEVPDYYDVISTP--MDLQTMLRKVKQKTYKSKR---EFKDDLDLIWSNCRTYNAAENHPLQL----------CARRLQAKAERLLKNITDRKERTDPTIP 160          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14765.2845.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LL59_ECTSI1.380e-5445.30Bromo domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A2H3J790_WOLCO4.830e-633.62Bromo domain-containing protein n=1 Tax=Wolfiporia... [more]
A0A4S4N0P3_9APHY3.500e-536.04Bromo domain-containing protein n=1 Tax=Antrodiell... [more]
A0A067NJZ4_PLEOS4.670e-533.82Bromo domain-containing protein n=2 Tax=Pleurotus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainSMARTSM00297bromo_6coord: 115..235
e-value: 5.4E-6
score: 35.9
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 122..197
e-value: 2.4E-13
score: 50.0
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 130..205
score: 10.387
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 118..239
e-value: 7.1E-17
score: 63.2
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 120..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14765contigH-paniculata_contig14765:1798..3430 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14765.2845.1mRNA_H-paniculata_contig14765.2845.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14765 1688..5364 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14765.2845.1 ID=prot_H-paniculata_contig14765.2845.1|Name=mRNA_H-paniculata_contig14765.2845.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=462bp
MRQCGNITIALAGGIQSPILSASSVAPTEGSCTEDRLSHVTICSICETFA
LEEDVVVLCRNCPRTFCCACARSSAIETETPPAVMRIGPSRCGGHLETNR
CPSCLHRRDEHFSAPLPGAKPMEHLVEALLKHDLSHAFRAPVDSTEYPDY
VYRIGRNHMMDLQTMVEKLREGKYSSRRGRGTFKQDLNKIWRNCRFYADC
DEQGVPLDETTVPGIVRCALILEKMANRFYTTHMRDQTGVVVPDTSWDGW
RQARQLENEQARLQLSELQPRKMEANVDCVSAAAVPCLPLPALVDSEEDA
IPETGILGGEEKNAADKVYNLVLMRTTSRKRSHSEIRDGCSVQNDESSNN
GATVGIQAPEAAQRDDQTATDNRWGWRDGMTEPCYPPSPHDNMPDWSLFE
QLCRVSVEFSSISVLEQATKPPPLRIRASDRETLSRPWSRGTCSSETNTA
IMALRLASSRV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR036427Bromodomain-like_sf