mRNA_H-paniculata_contig14752.2839.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig14752.2839.1 vs. uniprot
Match: D7FQW2_ECTSI (Sterol or diacylglycerol O-acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW2_ECTSI) HSP 1 Score: 261 bits (668), Expect = 1.520e-70 Identity = 185/548 (33.76%), Postives = 238/548 (43.43%), Query Frame = 1
Query: 256 DGSSSRNPLLTFREFCFFLLLAPSLVLVPEWVKQASATTFTVEVKRPGACCRRRRIGRAACEFFHAALTYLAVHAMASGMYAPVMRVLATLFCDD--------------ASSF-----------------------WLDAEAWSS---YRTDGTLEGWLVAL-------------------SGGAQGSRLQYWLAFTIAFSLGML-FSSMVHFLMFYAFWHCVCLGSAQLWNYPDRNFYGPWWLVTDDLKLLFRMWSAPVHRWLAACVHRPIV--------ELGRRSNSHESGAASSISVKTD---------------------GPNKSKGENKWLSLVALTSAFALSGAIHEAVTFVAMRHTCWPFNTFALVLSGTHIALWDVVCPVRSVLR--------------------------------VATLSDPMAQKVAVD--------------------------------GRSHAAESLSDSRKSRDKLDKDAG---------ASTALMGSEWRGWGAVVYFMGTSCPFGLMIDYLGWQWWRHTLL 1413
DG + PLLTF EF FF+L APSLV PE++++ + R C GRA EF HA L ++A+HA S +APVMRV+A AS F W+D W+ T G GW +L GGA G+ L W A +L ML FS MVHF+ FY FWHCVCLG A+LW YPDRNFYGPWWL+ ++ ++R+WS PVHRW+++C++RP+V + GR G A ++ K++ +++ W L+ALTSAF S +HEAVTFVAMR TCWP +TF+LVLS I+ WD + PVRS++ AT S P A A D G HA S + S D G ++T G EWRGWGAV +F G S GL +D+L WQWWRHTLL
Sbjct: 253 DGDLAGPPLLTFGEFLFFILAAPSLVCEPEFLRKHA---------RRAPCP-----GRAFSEFSHAVLVFVALHAACSAFFAPVMRVVAAAVFSTPSPSLVGESAQAALASDFRGCGSGDGEHTCGGSPFNGATIGWVDCVGWAGAEGIHTAGGSGGWFFSLLLDGGGPETAAISYFESLFCGGAGGAGLAGWWGIAAASALAMLVFSPMVHFMAFYGFWHCVCLGCAELWGYPDRNFYGPWWLLAEEPDTMYRLWSTPVHRWVSSCIYRPVVGHKNAAFSQPGRSGGGVRRGLAGTLCRKSEEXXXXXXXXXXXXXXXXXXXXXXXQTQRRWTWRRLLALTSAFLFSSLVHEAVTFVAMRRTCWPVSTFSLVLSIFVISGWDAMYPVRSIISESAAVSGASGEDSGDRHGTGPPAEQAVLPSSSAATRSQPGATATAADVSCGSTVVETSDGTLEDHSEKSYVVVDQARDLGEQHAITSKNGS----DSCGTGGGGGVDGAGRVSNTKKAGREWRGWGAVAFFEGASLVMGLAVDFLMWQWWRHTLL 782
BLAST of mRNA_H-paniculata_contig14752.2839.1 vs. uniprot
Match: D7FQV8_ECTSI (Diacylglycerol O-acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV8_ECTSI) HSP 1 Score: 238 bits (608), Expect = 7.560e-63 Identity = 175/498 (35.14%), Postives = 228/498 (45.78%), Query Frame = 1
Query: 274 NPLLTFREFCFFLLLAPSLVLVPEWVKQASATTFTVEVKRPGACCRRRRIGRAACEFFHAALTYLAVHAMASGMYAPVMRVLATLFCDDASSFWLDAEAWSSYR-TDGTLEGW-----------LVALSGG---------------AQGSRLQYWLAFTIAFSLGM-LFSSMVHFLMFYAFWHCVCLGSAQLWNYPDRNFYGPWWLVTDDLKLLFRMWSAPVHRWLAACVHRPIVELGRR-------------------SNSHESGAASSISVKTDGPNKSKGEN-----------KWLSLVALTSAFALSGAIHEAVTFVAMRHTCWPFNTFALVLSGTHIALWDVVCPV---------RSVLRVATLSDPMA--QKVAVDGRSHAAESLSDSRK-----------------------------------SRDKLDKDAGASTALMGSEW----------------RGWGAVVYFMGTSCPFGLMIDYLGWQWWRHT 1407
NP LTFREF FFL+LAPSLV P+++K + +RP R+ AA EF HA LTY+AVH S ++AP +RVLA + W D E W+ R TDG+ GW L A GG A L IA LG+ +FS M+HFLMFYAF+H VCLG A+L+ YPDRN YGPWWLV DD++ FR+WSAPVHRWL+ V RP++E+G+R +N + G+ + G + + G +W L ++ +F +SG +HEAV FVAMR T WPF+TF L ++ + WD + PV R R A S A V + AA S + R S+D +K+ G T GSE RGW AVV + G P L++DY WQWWRHT
Sbjct: 256 NPALTFREFAFFLVLAPSLVCRPQYLKSGA--------RRPP------RVAAAASEFLHAGLTYVAVHVACSALFAPALRVLAEALHSGGVAGWADEEDWAELRRTDGS--GWWLHDSSRSIGSLFASGGGSCVGGGVGCVPGWTFADDGTGHPGLTVAIAACLGVFVFSPMMHFLMFYAFFHSVCLGCAELYGYPDRNTYGPWWLVVDDVRDYFRLWSAPVHRWLSESVQRPMIEVGQREALRHRRRRVAREEDKPPATNGNSGGSNGVHDYRPKGTSSTTGGKARHGADAGIVTRWW-LASVVCSFLVSGVVHEAVGFVAMRRTVWPFSTFFLAVTASMAPFWDTLFPVVADTSTPGTRPTGRRAFTSIAAAGGDGVGFSAETEAANSAAVPRTAXXXXXXXXXXXXXXXXXXXXXXXXAADGQHAGHPSKDVANKN-GVVTGQQGSEAPRLGRKEPLRPKIGRRRGWAAVVVYGGMYMPLTLVVDYCVWQWWRHT 735
BLAST of mRNA_H-paniculata_contig14752.2839.1 vs. uniprot
Match: A0A6H5J9L7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9L7_9PHAE) HSP 1 Score: 223 bits (567), Expect = 4.110e-57 Identity = 147/398 (36.93%), Postives = 188/398 (47.24%), Query Frame = 1
Query: 277 PLLTFREFCFFLLLAPSLVLVPEWVKQASATTFTVEVKRPGACCRRRRIGRAACEFFHAALTYLAVHAMASGMYAPVMRVLAT------------------LFCD----------------------DASSFWLDAEAWSS---YRTDGTLEGWLVAL-------------------SGGAQGSRLQYWLAFTIAFSLGML-FSSMVHFLMFYAFWHCVCLGSAQLWNYPDRNFYGPWWLVTDDLKLLFRMWSAPVHRWLAACVHRPIVELGRRSNSHESGAASSISVKTDGPNKSKGENK---------------------------------------WLSLVALTSAFALSGAIHEAVTFVAMRHTCWPFNTFALVLSGTHIALWDVVCPVRSVL 1164
PLLT EF FF+L APSLV E++++ + R R GRA EF HA L ++A+HA S +APVMRVLA+ L CD A W+D W+ T G GW +L GGA G+ L W A A +L ML FS MVHF+ FY FWHCVCLG A+LW YPDRNFYGPWWL+ ++ ++R+WS PVHRW+++C++RPIV G +S + SS V+ S E + W L+ALTSAF S +HEAVTFVAMR TCWP +TF+LVLS I+ WD + PVRS++
Sbjct: 256 PLLTLGEFLFFILAAPSLVCEQEFLRERAR--------------RAPRPGRAFSEFSHAVLVFVALHAACSAFFAPVMRVLASAVFSPPSPSLAAESAHEALACDFRGGSSGGSGGGEYTCGGLPSIGAMIGWVDCVGWAGAEGIHTAGRSGGWFFSLLLDGGGSETAVASYFESLFCGGAGGAGLAGWWAIAAASALAMLVFSPMVHFMAFYGFWHCVCLGCAELWGYPDRNFYGPWWLLAEEPDTMYRLWSTPVHRWVSSCIYRPIV--GHKSAAIPQPGCSSGGVRRGLAGTSCREPEEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRWTWRRLMALTSAFLFSSLVHEAVTFVAMRRTCWPVSTFSLVLSIFVISGWDAMYPVRSII 637
BLAST of mRNA_H-paniculata_contig14752.2839.1 vs. uniprot
Match: D7FUK9_ECTSI (Sterol or diacylglycerol O-acyltransferase, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUK9_ECTSI) HSP 1 Score: 214 bits (545), Expect = 3.810e-56 Identity = 138/390 (35.38%), Postives = 193/390 (49.49%), Query Frame = 1
Query: 283 LTFREFCFFLLLAPSLVLVPEWVKQASATTFTVEVKRPGACCRRRRIGRAACEFFHAALTYLAVHAMASGMYAPVMRVLATL----FCDDASSFWLDAEA-----WSSYRTDGTLEGWLVALSGGAQ---GSRLQYWLAFTIAFSLGMLF--SSMVHFLMFYAFWHCVCLGSAQLWNYPDRNFYGPWWLVTDDLKLLFRMWSAPVHRWLAACVHRPIVELGRRSNSHESGAAS--SISVKTDGPNKSKGENKWLSLVALTSAFALSGAIHEAVTFVAMRHTCWPFNTFALVLSGTHIALWDVVCPVRSVLRVATLSDPMAQKVAVDGRSHAAESLSDSRKSRDKLDKDAGASTALMGSEWRGWGAVVYFMGTSCPFGLMIDYLGWQWWRH 1404
LTF E+ FFL L+PSLV +K ++ RR R RAA EFFHA LT+L H + + AP +R+ + + + A++ W + EA W S+ L L+GG + G+RL +A + L MLF SS +HF++FYAFWHC+CLG A+LW +PDRN YG WWL+ D+ + RMWS PVHRWL+ CVH P++EL S+ G S S + T + +KW + A+ + F +SG HEAV ++AMR TCWPFNTF L + G + WD+V P L D + G +LS ++ + RG + F + + D W WWRH
Sbjct: 179 LTFGEYLFFLFLSPSLVCEVRLMKVSAR--------------RRSRPLRAASEFFHAVLTFLCAHCVVGSILAPSLRLFFSAVSPGWVEGAAAGWAELEAAGGAGWPSWTAGSAL------LAGGDKEDSGTRLGQLVA--LGCFLWMLFVVSSALHFMVFYAFWHCICLGMAELWGFPDRNLYGCWWLLFDEPRDFLRMWSTPVHRWLSTCVHWPMLELCSTSDEGVDGTKSPPSAELSTATAEVAGDPSKWTWVPAVLATFVVSGVFHEAVVYIAMRGTCWPFNTFLLCVGGVLVIFWDIVFP---------LPDLKPSSESEGGSPPQTATLS-------PRNEGGAGKKVVRAYGHRGRMSAAAFCVSVQLSAFIADCAAWLWWRH 530
BLAST of mRNA_H-paniculata_contig14752.2839.1 vs. uniprot
Match: A0A6H5KXI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXI3_9PHAE) HSP 1 Score: 172 bits (437), Expect = 7.300e-42 Identity = 110/273 (40.29%), Postives = 142/273 (52.01%), Query Frame = 1
Query: 259 GSSSRNPLLTFREFCFFLLLAPSLVLVPEWVKQASATTFTVEVKRPGACCRRRRIGRAACEFFHAALTYLAVHAMASGMYAPVMRVLATLFCDDASSFWLDAEAWSSYR-TDGTLEGWLVALSGGAQGSRLQY---------------W-----------LAFTIAFSLGM-LFSSMVHFLMFYAFWHCVCLGSAQLWNYPDRNFYG----------------------------PWWLVTDDLKLLFRMWSAPVHRWLAACVHRPIVELGRR 909
G+ + NP LTFREF FFL LAPSLV P+++ + +RP R+ AA EF HA LTY+AVH S ++AP +RVLA + + W D E W+ R TDG+ GW + S G+ GS W L IA LG+ +FS M+HFLMFYAF+H VCLG A+L+ YPDRN YG PWWLV DD++ FR+WSAPVHRWL+ V RP++E+G+R
Sbjct: 250 GARAANPALTFREFAFFLALAPSLVCQPQYLASGA--------RRPP------RVAAAASEFLHAGLTYIAVHVACSALFAPALRVLAGVLHSGGVAGWADEEDWAELRRTDGS--GWWLYDSSGSLGSLFASGGGGCVHGGVGCGPGWTFSDDGTGHPGLTVAIAACLGVFVFSPMMHFLMFYAFFHSVCLGCAELYGYPDRNTYGELSFSLVGDRFTPSAGLEGQALRHDSAGPWWLVVDDVRDYFRLWSAPVHRWLSESVQRPMIEVGQR 506 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14752.2839.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14752.2839.1 >prot_H-paniculata_contig14752.2839.1 ID=prot_H-paniculata_contig14752.2839.1|Name=mRNA_H-paniculata_contig14752.2839.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=422bp MDSHKADIDPHSSTSPASSCSSGQGSHGRLVDGSSSRNPLLTFREFCFFLback to top mRNA from alignment at H-paniculata_contig14752:1047..5540+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14752.2839.1 ID=mRNA_H-paniculata_contig14752.2839.1|Name=mRNA_H-paniculata_contig14752.2839.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4494bp|location=Sequence derived from alignment at H-paniculata_contig14752:1047..5540+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14752:1047..5540+ >mRNA_H-paniculata_contig14752.2839.1 ID=mRNA_H-paniculata_contig14752.2839.1|Name=mRNA_H-paniculata_contig14752.2839.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2532bp|location=Sequence derived from alignment at H-paniculata_contig14752:1047..5540+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |