mRNA_H-paniculata_contig14751.2838.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14751.2838.1 vs. uniprot
Match: A0A6H5JK80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK80_9PHAE) HSP 1 Score: 210 bits (534), Expect = 8.310e-61 Identity = 109/217 (50.23%), Postives = 147/217 (67.74%), Query Frame = 1 Query: 16 TPQGTKAKKITAERGQKVVGMKRSNSRGNITVIATVNAAGAAMPPTIIFKGKQMQAACFCTGDNGVPGATYTATNSSYMQGMVFVSLLKEFDHHVGASGFKDGNSHILALDGHASHVNLQVVELAMPLTIELFQFPSHFSHLAQPLDVTTFATYKKAITSVLTTFGEHHGAKMTVKADMVGVIGQAWARGAKVSQMKTSFQGAGLRPVNMQRALDWL 666 TPQGTK K+ AE GQKVVG RSNSR N+TV+ T++AAGA + P II+KG++MQA + G NG P A T+SS+MQG VFV+ +++F + G +G H+L LDGHASHV +VV+LA L I L+Q PSH SH+ QPLDV +F ++K IT VL+ F +G ++ K+DM+G++G AW R Q +SF GAGL PV+ +RA+ L Sbjct: 182 TPQGTKTMKVIAESGQKVVGAMRSNSRDNVTVVVTISAAGATLAPWIIYKGQRMQAD-WVKGRNGPPNARLAVTDSSFMQGTVFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKWEITKVLSAFPARNGGRVPAKSDMLGILGDAWLRSFSEEQNISSFAGAGLWPVDGERAMGRL 397
BLAST of mRNA_H-paniculata_contig14751.2838.1 vs. uniprot
Match: A0A6H5JBS6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS6_9PHAE) HSP 1 Score: 205 bits (522), Expect = 1.100e-60 Identity = 112/217 (51.61%), Postives = 138/217 (63.59%), Query Frame = 1 Query: 16 TPQGTKAKKITAERGQKVVGMKRSNSRGNITVIATVNAAGAAMPPTIIFKGKQMQAACFCTGDNGVPGATYTATNSSYMQGMVFVSLLKEFDHHVGASGFKDGNSHILALDGHASHVNLQVVELAMPLTIELFQFPSHFSHLAQPLDVTTFATYKKAITSVLTTFGEHHGAKMTVKADMVGVIGQAWARGAKVSQMKTSFQGAGLRPVNMQRALDWL 666 TPQGTK K AE GQKVV RSNS N TV+ T++A GA PTIIFKG+++Q F NG A YT T+SS+MQG VF+ LK+F + G DG H L LDGHASHV+ +V++LAM L I LFQ PSH SH+ QPLDV F T+KK +T VL + +G + +K D+ GVI AW R + + SF GAGLRPV+M RAL L Sbjct: 168 TPQGTKTMKAFAEAGQKVVESMRSNSLENTTVVTTISANGATWAPTIIFKGQRLQPDWFAER-NGPKDARYTCTDSSFMQGDVFIKYLKDFHKQLDDRGVLDGKPHTLVLDGHASHVSYEVIKLAMELNIILFQLPSHTSHITQPLDVVAFGTFKKEVTKVLQDYYHANGGLLPLKRDVPGVIAAAWQRSLTLERNNASFGGAGLRPVDMDRALTRL 383
BLAST of mRNA_H-paniculata_contig14751.2838.1 vs. uniprot
Match: A0A6H5JYS0_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYS0_9PHAE) HSP 1 Score: 204 bits (518), Expect = 2.560e-59 Identity = 115/218 (52.75%), Postives = 138/218 (63.30%), Query Frame = 1 Query: 16 TPQGTKAKKITAERGQKVVGMKRSNSRGNIT-VIATVNAAGAAMPPTIIFKGKQMQAACFCTGDNGVPGATYTATNSSYMQGMVFVSLLKEFDHHVGASGFKDGNSHILALDGHASHVNLQVVELAMPLTIELFQFPSHFSHLAQPLDVTTFATYKKAITSVLTTFGEHHGAKMTVKADMVGVIGQAWARGAKVSQMKTSFQGAGLRPVNMQRALDWL 666 TPQGTK K AE GQKVVG RSNSR N T V+ T++A G PTIIFKG ++QA F NG GA YT T+SS+MQG VF++ LK+F G G DG HIL LDGH+SHV ++V LAM L I L Q PSH SH+ QPLDV F +KK++T VL +F + G + +K DM GVI AW K+SF GAGL PVN +RAL L Sbjct: 148 TPQGTKTTKAFAESGQKVVGSMRSNSRENTTTVVVTISADGHTWAPTIIFKGHRLQADWFVER-NGPEGARYTCTDSSFMQGDVFIAYLKDFHKQFGERGLLDGKPHILLLDGHSSHVRVEVTRLAMNLKIILIQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKLSFTPEINKSSFAGAGLWPVNKERALGRL 364
BLAST of mRNA_H-paniculata_contig14751.2838.1 vs. uniprot
Match: A0A6H5L5E2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E2_9PHAE) HSP 1 Score: 200 bits (508), Expect = 1.010e-58 Identity = 103/217 (47.47%), Postives = 144/217 (66.36%), Query Frame = 1 Query: 16 TPQGTKAKKITAERGQKVVGMKRSNSRGNITVIATVNAAGAAMPPTIIFKGKQMQAACFCTGDNGVPGATYTATNSSYMQGMVFVSLLKEFDHHVGASGFKDGNSHILALDGHASHVNLQVVELAMPLTIELFQFPSHFSHLAQPLDVTTFATYKKAITSVLTTFGEHHGAKMTVKADMVGVIGQAWARGAKVSQMKTSFQGAGLRPVNMQRALDWL 666 T QGTK K+ E GQKV G RSNSR N+TV+ T++AAGA + P II+KG+++QA + G NG P A +SS+MQG VFV+ +++F + G +G H+L LDGHASHV +VV+LA L I L+Q PSH SH+ QPLDV +F ++K+ IT VL+ F +G ++ K+DM+G++G AW R + +SF GAGL PV+ +RA+ L Sbjct: 174 TSQGTKTMKVITESGQKVGGAMRSNSRENVTVVVTISAAGATLAPWIIYKGQRLQAD-WVKGRNGPPNARLAVIDSSFMQGTVFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKREITKVLSAFPARNGGRVPAKSDMLGILGDAWLRSFSEERNTSSFAGAGLWPVDGERAMGRL 389
BLAST of mRNA_H-paniculata_contig14751.2838.1 vs. uniprot
Match: B2KWI5_ECTSI (Transposase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI5_ECTSI) HSP 1 Score: 203 bits (516), Expect = 8.750e-58 Identity = 105/217 (48.39%), Postives = 145/217 (66.82%), Query Frame = 1 Query: 16 TPQGTKAKKITAERGQKVVGMKRSNSRGNITVIATVNAAGAAMPPTIIFKGKQMQAACFCTGDNGVPGATYTATNSSYMQGMVFVSLLKEFDHHVGASGFKDGNSHILALDGHASHVNLQVVELAMPLTIELFQFPSHFSHLAQPLDVTTFATYKKAITSVLTTFGEHHGAKMTVKADMVGVIGQAWARGAKVSQMKTSFQGAGLRPVNMQRALDWL 666 T QGTK K AE GQKVVG RSNSR +TV+ T++AAGA + P II+KG+++QA + G NG P A T+SS+MQG VFV+ +++F + G +G H+L LDGHASHV +V++LA L I L+Q PSH SH+ QPLDV +F ++K+ IT VL+ F +G ++ K+DM+G++G AW R Q +SF GAGL PV+ +RA+ L Sbjct: 174 TSQGTKTMKAIAESGQKVVGAMRSNSRETVTVVVTISAAGATLAPWIIYKGQRLQAD-WVKGRNGPPNARLAVTDSSFMQGTVFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVIKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKREITKVLSAFPARNGGRVPAKSDMLGILGDAWLRSFSEQQNISSFAGAGLWPVDGERAMGRL 389
BLAST of mRNA_H-paniculata_contig14751.2838.1 vs. uniprot
Match: A0A6H5K717_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K717_9PHAE) HSP 1 Score: 190 bits (483), Expect = 9.150e-58 Identity = 97/201 (48.26%), Postives = 136/201 (67.66%), Query Frame = 1 Query: 40 KITAERGQKVVGMKRSNSRGNITVIATVNAAGAAMPPTIIFKGKQMQAACFCTGDNGVPGATYTATNSSYMQGMVFVSLLKEFDHHVGASGFKDGNSHILALDGHASHVNLQVVELAMPLTIELFQFPSHFSHLAQPLDVTTFATYKKAITSVLTTFGEHHGAKMTVKADMVGVIGQAWARGAKVSQMKTSFQGAGLRPVN 642 K+ AE GQKVVG RSNSR N+TV+ T++ AGA + P II+KG+++QA + G NG P A T+SS+MQG+ FV+ +++F + +G H+LALDGHASHV +VV+LA L I L+Q PSH SH+ QPLDV +F ++K+ IT VL+ F +G ++ K+DM+G++G AW R Q +SF GAGL PV+ Sbjct: 2 KVIAESGQKVVGAMRSNSRENVTVVVTISTAGATLAPWIIYKGQRLQAD-WVEGRNGPPNARLAVTDSSFMQGIAFVNYVRDFHRQLLDRDLINGTPHVLALDGHASHVTYEVVKLARELNIVLYQIPSHSSHVVQPLDVGSFGSFKREITKVLSAFPARNGGRVPAKSDMLGILGDAWLRSFSEEQNISSFVGAGLWPVD 201
BLAST of mRNA_H-paniculata_contig14751.2838.1 vs. uniprot
Match: A0A6H5KH00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH00_9PHAE) HSP 1 Score: 197 bits (502), Expect = 6.980e-57 Identity = 107/217 (49.31%), Postives = 132/217 (60.83%), Query Frame = 1 Query: 16 TPQGTKAKKITAERGQKVVGMKRSNSRGNITVIATVNAAGAAMPPTIIFKGKQMQAACFCTGDNGVPGATYTATNSSYMQGMVFVSLLKEFDHHVGASGFKDGNSHILALDGHASHVNLQVVELAMPLTIELFQFPSHFSHLAQPLDVTTFATYKKAITSVLTTFGEHHGAKMTVKADMVGVIGQAWARGAKVSQMKTSFQGAGLRPVNMQRALDWL 666 T QG + +++ AERGQ VV RS SR N T+I T+NAAGA + PTIIFKG++ D G PGATYT T SS+M G VF+ + +F + DG H+L LDGHASHV+L+VVELA L I L Q PSH SH+ QPLDV F +KK +T + F HG + K DM VIGQAW+ K SF GAGL PV+ +RAL L Sbjct: 100 TIQGAQGQQVYAERGQPVVPQMRSTSRENCTIITTINAAGAVLAPTIIFKGQRFNGDWIVDQD-GPPGATYTCTESSFMCGDVFIKYIMDFHEQLRKRNLLDGKPHVLVLDGHASHVSLEVVELARSLNIHLVQLPSHMSHITQPLDVAGFGCFKKELTKAIQAFPATHGGALPRKRDMASVIGQAWSTSFTPDINKASFAGAGLWPVDKERALSRL 315
BLAST of mRNA_H-paniculata_contig14751.2838.1 vs. uniprot
Match: A0A6H5JV04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV04_9PHAE) HSP 1 Score: 198 bits (504), Expect = 3.040e-56 Identity = 105/217 (48.39%), Postives = 138/217 (63.59%), Query Frame = 1 Query: 16 TPQGTKAKKITAERGQKVVGMKRSNSRGNITVIATVNAAGAAMPPTIIFKGKQMQAACFCTGDNGVPGATYTATNSSYMQGMVFVSLLKEFDHHVGASGFKDGNSHILALDGHASHVNLQVVELAMPLTIELFQFPSHFSHLAQPLDVTTFATYKKAITSVLTTFGEHHGAKMTVKADMVGVIGQAWARGAKVSQMKTSFQGAGLRPVNMQRALDWL 666 TPQG K K + GQKVV R+NSR N T++ T++A G+ PTIIFKG+++Q F NG P A YT T+SS+MQG VF+ LK+F + G DG HIL LDGHASHV+++V++LAM L I LFQ PSH SH+ QPLDV F +K+ +T VL+ + G + K D+ GVI AW + ++SF GAGL PVNM+RA+ L Sbjct: 172 TPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQPDWFAE-KNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRL 387
BLAST of mRNA_H-paniculata_contig14751.2838.1 vs. uniprot
Match: A0A6H5JGP6_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGP6_9PHAE) HSP 1 Score: 196 bits (499), Expect = 5.000e-56 Identity = 102/217 (47.00%), Postives = 142/217 (65.44%), Query Frame = 1 Query: 16 TPQGTKAKKITAERGQKVVGMKRSNSRGNITVIATVNAAGAAMPPTIIFKGKQMQAACFCTGDNGVPGATYTATNSSYMQGMVFVSLLKEFDHHVGASGFKDGNSHILALDGHASHVNLQVVELAMPLTIELFQFPSHFSHLAQPLDVTTFATYKKAITSVLTTFGEHHGAKMTVKADMVGVIGQAWARGAKVSQMKTSFQGAGLRPVNMQRALDWL 666 TPQGTK K+ AE GQKVVG S SR N+TV+ T++ GA + P II+KG+++QA + G N P A TNSS+MQG+VFV+ +++F + G +G H+L LDGHASHV +VV+LA L I L+Q PSH SH+ QPLDV +F ++K+ I VL+ F +G ++ K+DM+G++G AW R Q +SF GAGL V+ +RA+ L Sbjct: 133 TPQGTKTMKVIAESGQKVVGAIHSKSRENVTVVVTISTVGATLAPWIIYKGQRLQAD-WAKGRNAPPNARLAVTNSSFMQGIVFVNYIRDFHRQLLDRGLINGTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKREIPKVLSAFQARNGGRVPAKSDMLGLLGDAWLRSFSEEQNISSFAGAGLWLVDGERAMGQL 348
BLAST of mRNA_H-paniculata_contig14751.2838.1 vs. uniprot
Match: A0A6H5JYX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX7_9PHAE) HSP 1 Score: 194 bits (493), Expect = 6.740e-56 Identity = 105/222 (47.30%), Postives = 132/222 (59.46%), Query Frame = 1 Query: 16 TPQGTKAKKITAERGQKVVGMKRSNSRGNITVIATVNAAGAAMPPTIIFKGKQMQAACFCTGD-----NGVPGATYTATNSSYMQGMVFVSLLKEFDHHVGASGFKDGNSHILALDGHASHVNLQVVELAMPLTIELFQFPSHFSHLAQPLDVTTFATYKKAITSVLTTFGEHHGAKMTVKADMVGVIGQAWARGAKVSQMKTSFQGAGLRPVNMQRALDWL 666 T QGT+ +++ AERGQ VV RS SR N T++ T+NAAGA + PTIIFKG++ GD NG PGA Y T SS+M G VF+ +K F +G DG H+L LDGHASHV L V++LA+ L I L Q PSH SH+ QPLDV F +KK + V+ F +G + K DM G+IG AW K SF GAGL PV+ +RAL L Sbjct: 188 TVQGTQGQRVMAERGQPVVAQMRSTSRENCTIVTTINAAGAVLAPTIIFKGQRFN------GDWVADLNGPPGAYYDCTESSFMCGEVFIKYIKNFHKQLGDRNLLDGKPHVLVLDGHASHVTLDVIKLAISLNIHLVQLPSHMSHITQPLDVAGFGCFKKELAKVIQAFPARNGGALPRKRDMAGMIGLAWGSSFTPEINKASFAGAGLWPVDRERALSRL 403 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14751.2838.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14751.2838.1 >prot_H-paniculata_contig14751.2838.1 ID=prot_H-paniculata_contig14751.2838.1|Name=mRNA_H-paniculata_contig14751.2838.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=223bp MVSDVTPQGTKAKKITAERGQKVVGMKRSNSRGNITVIATVNAAGAAMPPback to top mRNA from alignment at H-paniculata_contig14751:1540..2208+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14751.2838.1 ID=mRNA_H-paniculata_contig14751.2838.1|Name=mRNA_H-paniculata_contig14751.2838.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=669bp|location=Sequence derived from alignment at H-paniculata_contig14751:1540..2208+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14751:1540..2208+ >mRNA_H-paniculata_contig14751.2838.1 ID=mRNA_H-paniculata_contig14751.2838.1|Name=mRNA_H-paniculata_contig14751.2838.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1338bp|location=Sequence derived from alignment at H-paniculata_contig14751:1540..2208+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |