prot_H-paniculata_contig14720.2821.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14720.2821.1
Unique Nameprot_H-paniculata_contig14720.2821.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length47
Homology
BLAST of mRNA_H-paniculata_contig14720.2821.1 vs. uniprot
Match: D7G2K8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K8_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 3.560e-17
Identity = 39/47 (82.98%), Postives = 40/47 (85.11%), Query Frame = 0
Query:    1 QVWPFSLQNDGFWEKKIDEPFLEKDRNALELLRALIRVTMMRHSKSQ 47
            QVWPFSLQNDGFWEKK+ EPF  KD  ALELLRALI V MMRHSKSQ
Sbjct:  595 QVWPFSLQNDGFWEKKVGEPFEAKDYGALELLRALIGVVMMRHSKSQ 641          
BLAST of mRNA_H-paniculata_contig14720.2821.1 vs. uniprot
Match: A0A835Z4V2_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4V2_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 2.400e-11
Identity = 27/45 (60.00%), Postives = 36/45 (80.00%), Query Frame = 0
Query:    1 QVWPFSLQNDGFWEKKIDEPFLEKDRNALELLRALIRVTMMRHSK 45
            +VWPF+LQNDGFWE+K+  PF  + R+AL L+ AL+ +T MRHSK
Sbjct:  368 RVWPFTLQNDGFWERKVQAPFEGRRRDALPLVHALVEITSMRHSK 412          
BLAST of mRNA_H-paniculata_contig14720.2821.1 vs. uniprot
Match: A0A2V3IIE0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIE0_9FLOR)

HSP 1 Score: 52.4 bits (124), Expect = 1.370e-6
Identity = 23/47 (48.94%), Postives = 34/47 (72.34%), Query Frame = 0
Query:    1 QVWPFSLQNDGFWEKKIDEPFLEKDRNALELLRALIRVTMMRHSKSQ 47
            ++WPF+L+NDGFWEK +  P   + R    LL +L+ VTM+RH+K+Q
Sbjct:  576 RIWPFTLENDGFWEKHVLGP--RRSRVGSSLLSSLLDVTMIRHTKAQ 620          
BLAST of mRNA_H-paniculata_contig14720.2821.1 vs. uniprot
Match: R7QAQ4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAQ4_CHOCR)

HSP 1 Score: 50.1 bits (118), Expect = 8.960e-6
Identity = 24/47 (51.06%), Postives = 33/47 (70.21%), Query Frame = 0
Query:    1 QVWPFSLQNDGFWEKKIDEPFLEKDRNALELLRALIRVTMMRHSKSQ 47
            +VWPF+L +DGFWE+ I  PF  ++  A   +  L+ VTMMRHSK+Q
Sbjct:  273 RVWPFTLFDDGFWERLIYCPFAAQESTAF--IDHLLNVTMMRHSKAQ 317          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14720.2821.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G2K8_ECTSI3.560e-1782.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z4V2_9STRA2.400e-1160.00SNF2 family N-terminal domain-containing protein n... [more]
A0A2V3IIE0_9FLOR1.370e-648.94Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QAQ4_CHOCR8.960e-651.06Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14720contigH-paniculata_contig14720:6088..6228 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14720.2821.1mRNA_H-paniculata_contig14720.2821.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14720 6088..6228 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14720.2821.1 ID=prot_H-paniculata_contig14720.2821.1|Name=mRNA_H-paniculata_contig14720.2821.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=47bp
QVWPFSLQNDGFWEKKIDEPFLEKDRNALELLRALIRVTMMRHSKSQ
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