mRNA_H-paniculata_contig1472.2819.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1472.2819.1 vs. uniprot
Match: D7FI10_ECTSI (DNA polymerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI10_ECTSI) HSP 1 Score: 795 bits (2053), Expect = 1.320e-272 Identity = 384/451 (85.14%), Postives = 412/451 (91.35%), Query Frame = 1 Query: 1 EIGNQVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVENANGSITYEKEMKGLDLVRREWCVLSKDTGKFVLDRILSGEAREAVVTSIHEHLEGLAVSMRRGEVAVPQYVITKGLNKAPHEYPDAKSQPHVQVALAMLKAGKSVNVGHHIPYVMCKIAGAASPAERARHPDDVLRTDGKLEVDVEWYLSQQIVPPVSRLCEPIEGTSMAVLAEKMGLDASKFKSHTPGDGGDDQDDWGFTPTSRLPDKERFRDVELLKMTCRACRQEAEFRGVFSWDRTKPVNGPGDVQPGLMCPNAACGAFYWGAGSEAGCISTLYQRLTLNVRKHLRVYYQTQLQCDDSSCGLRTRSAGVMGVACPGRGCQGRLVREYSDKALYDQLKFYETLFDVDRAQTRVSEQFNLKPTDLPVSAEHRQILGLVGRRIQDDVQSSGYNWIRPTLWSSVFIS 1353 +IGNQVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVE+ +GSITY+KEMKGLDLVRREWC LSKDTGKFVLDR+LSGEARE VVT IH+HLE LA SMR GEV VP+YVITKGLNKAPHEYPDAKSQPHVQVALAM+KAGKSVNVGHHIPYVMCKI GA SPAERARHPDDVLR+ GKLEVDVEWYL+QQIVPPVSRLCEPIEGTSMAVLAEKMGLDASKF SH GGDD DDW FTPTS+LPD ERFR VE LKMTCRAC ++AEF+GVFSWDR K VNGP D++PGLMCPN+ACGA+YWGAGSEA C+STLYQRLTL VR+HL+VYYQT L+CDDSSCGL TRS GVMGVACP +GCQGRLV+EY DK LYDQLK++ETLFDVDRAQT+VSE FN K TDLPVS EHRQIL LVGRRIQDDVQSSGYNWIRP+LWSSVF S Sbjct: 1152 DIGNQVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVEHPDGSITYDKEMKGLDLVRREWCTLSKDTGKFVLDRVLSGEARETVVTGIHDHLEALAASMRAGEVEVPRYVITKGLNKAPHEYPDAKSQPHVQVALAMMKAGKSVNVGHHIPYVMCKIEGATSPAERARHPDDVLRSGGKLEVDVEWYLNQQIVPPVSRLCEPIEGTSMAVLAEKMGLDASKFTSHANAAGGDDGDDWAFTPTSKLPDAERFRGVEPLKMTCRACHEQAEFQGVFSWDRKKAVNGPADLRPGLMCPNSACGAYYWGAGSEAACVSTLYQRLTLAVRRHLKVYYQTHLRCDDSSCGLLTRSTGVMGVACPAKGCQGRLVQEYPDKTLYDQLKYFETLFDVDRAQTKVSELFNFKETDLPVSPEHRQILSLVGRRIQDDVQSSGYNWIRPSLWSSVFTS 1602
BLAST of mRNA_H-paniculata_contig1472.2819.1 vs. uniprot
Match: A0A4D9CVK1_9STRA (DNA polymerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVK1_9STRA) HSP 1 Score: 511 bits (1317), Expect = 1.310e-163 Identity = 258/458 (56.33%), Postives = 325/458 (70.96%), Query Frame = 1 Query: 7 GNQVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVENANGSITYEKEMKGLDLVRREWCVLSKDTGKFVLDRILSGEAREAVVTSIHEHLEGLAVSMRRGEVAVPQYVITKGLNKAPHEYPDAKSQPHVQVALAMLKAGKSVNVGHHIPYVMCKIAGAASPAERARHPDDVLRTDGKLEVDVEWYLSQQIVPPVSRLCEPIEGTSMAVLAEKMGLDASKF-KSHTPGDGGDDQDDWGFTPTSRLPDKERFRDVELLKMTCRACRQEAEFRGVFSWDRTKPV-----------NGPGDVQPGLMCPNAACGAFYWGAGSEAGCISTLYQRLTLNVRKHLRVYYQTQLQCDDSSCGLRTRSAGVMGVACPGRGCQGRLVREYSDKALYDQLKFYETLFDVDRAQTRVSEQFNLKPTDLPVSAEHRQILGLVGRRIQDDVQSSGYNWIRPTLWSSV 1344 GN VK+ VNKLYKSLEL+LDG+FK MLLLKKKKYAAL V E A G++TY KE+KGLDLVRR+WCVLSK+TG+FV+D+ILSGE R+AVV +IH +LE LA MR GEV V QY ITKGLNKAPHEYPDAKSQPH+QVAL+M+KAGK VNVG HI YV+C+ GA + AERA PDDV ++G+L+VDVEWYL+QQI+PPV+RLCEPIEGTS+A LAE++GLD S+F + G G++ + WGFTP R+ D ERF E LK+ C C QEA+F GV+ G ++ GL+CPN +C A YWGA + A C + L+ R+TL VR H++ YY L CDD+ C R+R V+ AC RGC G + EYS+KAL+ QLKF ETLFDV RA+ + E + LP+ H ++L L+ + + V S+ YNWIRP+LWS + Sbjct: 1185 GNLVKQAVNKLYKSLELELDGIFKCMLLLKKKKYAALTVSETAEGTLTYAKELKGLDLVRRDWCVLSKETGRFVIDQILSGENRDAVVATIHSYLEELAKRMRAGEVDVRQYAITKGLNKAPHEYPDAKSQPHLQVALSMMKAGKPVNVGDHIEYVICEKEGAKAAAERAFLPDDVKHSEGELKVDVEWYLTQQILPPVARLCEPIEGTSVATLAERLGLDKSRFGQGGNGGSAGNEDEAWGFTPMCRMEDSERFAACEALKVRCSHCNQEADFPGVYCEALVAVAAAGESKGGVASTASGGLRSGLLCPNMSCQALYWGAPNAASCFARLFNRVTLTVRLHVKKYYDCWLLCDDTGCNRRSRQQSVVATACLARGCHGHMGMEYSEKALHTQLKFLETLFDVRRAKAKKMEAGTVP---LPLPDGHVRVLDLLHEQTRQIVSSTAYNWIRPSLWSMI 1639
BLAST of mRNA_H-paniculata_contig1472.2819.1 vs. uniprot
Match: A0A836C9W2_9STRA (DNA-directed DNA polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9W2_9STRA) HSP 1 Score: 450 bits (1157), Expect = 9.090e-152 Identity = 237/459 (51.63%), Postives = 307/459 (66.88%), Query Frame = 1 Query: 7 GNQVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVENANGSITYEKEMKGLDLVRREWCVLSKDTGKFVLDRILSGEAREAVVTSIHEHLEGLAVSMRRGEVAVPQYVITKGLNKAPHEYPDAKSQPHVQVALAMLKAGKSVNVGHHIPYVMCKIAGAASPAERARHPDDVLRTDGKLEVDVEWYLSQQIVPPVSRLCEPIEGTSMAVLAEKMGLDASKFKS----HTPGDGGDDQDDWGFTPTSRLPDKERFRDVELLKMTCRACRQEAEFRGVFSWDRTKPVNGPGDVQPGLMCPNAACGAFYWGAGSEAGCISTLYQRLTLNVRKHLRVYYQTQLQCDDSSCGLRTRSAGVMGVACPGRGC-QGRLVREYSDKALYDQLKFYETLFDVDRAQTRVSEQFNLKPTDLPVSAEHRQILGLVGRRIQDDVQSSGYNWIRPTLWSSVF-ISRTAH 1365 GN +KREVNKLY SLELDLDG+F++MLLLKKKKYAALVVVENA+G+I ++E+KGLDLVRR+WC LSK+ G+ VLDRILSG+ARE VV SIHEHL LA +MR G V + QYVITKGL+K P +YP+AK++PH+QVA+AM +AGK VNVG+HIPY++C+ +PAERARHP+DV+R+ G L DVEWYL+QQ+VPP++RLCEPIEGTS A++A++MGLD ++F + +D +DW FTP S + D+ERF+D L+ C G + P WG +E C S L Q L L +R + CDD+ CG RTR GV G ACP GC QGRL EYS+K LY+QLK +E LFD+ RAQ R ++ L L V H ++L L+ + + +V SS YNW++PTLW++VF +R AH Sbjct: 73 GNLIKREVNKLYSSLELDLDGIFQAMLLLKKKKYAALVVVENADGTIGVQREVKGLDLVRRDWCGLSKEAGQHVLDRILSGDARETVVESIHEHLRALADAMRAGAVPIGQYVITKGLSKPPQDYPNAKNEPHLQVAMAMQRAGKPVNVGNHIPYIICR--QTQTPAERARHPEDVMRSGGALVPDVEWYLAQQMVPPIARLCEPIEGTSAAIIAQQMGLDPARFSKGGXXXXXXNRDNDAEDWAFTPVSLMSDEERFKDCMPLRARCA---------------------GSSALTPAXXXXXXXX--XLWGHRNEVACFSALVQALVLAIRAAQARAAEGWYVCDDTCCGARTRDVGVRGSACPAPGCRQGRLSPEYSEKDLYEQLKSFEALFDLKRAQKRCHDRTKLPTGQLAVPKTHERVLELLLVKAKAEVDSSDYNWVKPTLWATVFGTARAAH 506
BLAST of mRNA_H-paniculata_contig1472.2819.1 vs. uniprot
Match: B8LEG9_THAPS (DNA polymerase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LEG9_THAPS) HSP 1 Score: 433 bits (1114), Expect = 6.210e-138 Identity = 222/462 (48.05%), Postives = 305/462 (66.02%), Query Frame = 1 Query: 1 EIGNQVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVENANGSITYEKEMKGLDLVRREWCVLSKDTGKFVLDRILSGEAREAVVTSIHEHLEGLAVSMRRGEVAVPQYVITKGLNKAPHEYPDAKSQPHVQVALAMLKAGKSVNVGHHIPYVMCKIAGAASP-------AERARHPDDVLRTDGKLEVDVEWYLSQQIVPPVSRLCEPIEGTSMAVLAEKMGLDASKFKSHTPGDGGDDQDDWGFTPTSRLPDKERFRDVELLKMTCRACRQEAEFRGVFSWDRTKPVNGPGDVQPGLMCPNAACGAFYWGAGSEAGCISTLYQRLTLNVRKHLRVYYQTQLQCDDSSCGLRTRSAGVMGVACPGRGCQGRLVREYSDKALYDQLKFYETLFDVDRA-------QTRVSEQFNLKPTDLPVSAEHRQILGLVGRRIQDDVQSSGYNWIRPTLWSSV 1344 E+GNQVKREVNKLY +LEL++DGVF+SMLLLKKKKYAA+ + E G + ++KEMKGLDLVRR+WC+ SK++GKFVLD+ILSGE +E VV++IH+HLE +A MR GE+ + +Y+ITKGLNK P+EYPDAKS PHV VA MLK K+V++G HIPYV+ ++ P AERARHPD++ R++G ++ DVEWYL+QQI+PP+SRLCEPIEGTS +LAEK+GLD+SK+ + + D+ D +TP S LPD+ERF+DVE L +TC C + AEF GVF R NG G+ CPN CG WG CI+ + R+ L ++ ++YY ++CDD C L TR V C GC GR+ Y++ +L QLK++++LFD+D A Q+ ++E+ LK ++ + L+ + SGYNW+ + S+ Sbjct: 688 ELGNQVKREVNKLYNTLELEIDGVFRSMLLLKKKKYAAVTMAEGPGGKMIFDKEMKGLDLVRRDWCIQSKESGKFVLDQILSGEEKEVVVSNIHDHLEKVAQQMRSGELPLDKYIITKGLNKHPNEYPDAKSLPHVYVAKMMLKDHKAVSIGDHIPYVITELEKEEEPSNKKTLAAERARHPDEIERSNGAMKPDVEWYLTQQILPPISRLCEPIEGTSPGILAEKLGLDSSKYNNIVSANI-DEDDIVDYTPASCLPDEERFKDVEKLVVTCSGCNESAEFPGVF---RLVKENGVSYCASGMSCPNPVCGRPNWGDADLESCIAKILNRMNLMKKEQQKLYYDGLVRCDDPMCNLETRQLSVYEGCCLKAGCNGRMKTVYTESSLQTQLKYFDSLFDIDHACKQLKKSQSSLTEKEMLKS----LNGADKDAFQLLHGVSSCSLSKSGYNWVAADFFQSL 1141
BLAST of mRNA_H-paniculata_contig1472.2819.1 vs. uniprot
Match: A0A8J9S0I2_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S0I2_PHATR) HSP 1 Score: 410 bits (1054), Expect = 1.140e-135 Identity = 203/460 (44.13%), Postives = 298/460 (64.78%), Query Frame = 1 Query: 1 EIGNQVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVENANGSITYEKEMKGLDLVRREWCVLSKDTGKFVLDRILSGEAREAVVTSIHEHLEGLAVSMRRGEVAVPQYVITKGLNKAPHEYPDAKSQPHVQVALAMLKAGKSVNVGHHIPYVMC---------KIAGAASPAERARHPDDVLRTDGKLEVDVEWYLSQQIVPPVSRLCEPIEGTSMAVLAEKMGLDASKFKSHTPGDGGDDQDDW-GFTPTSRLPDKERFRDVELLKMTCRACRQEAEFRGVFSWDRTKPVNGPGDVQPGLMCPNAAC-GAFYWGAGSEAGCISTLYQRLTLNVRKHLRVYYQTQLQCDDSSCGLRTRSAGVMGVACPGRGCQGRLVREYSDKALYDQLKFYETLFDVDRAQTRVSEQFNLKPTDLPVSAEHRQILGLVGRRIQDDVQSSGYNWIRPTLWSSVF 1347 E+G +VK+EVN+LY++LEL++DG+F+SMLLLKKKKYAA V E NG + Y +E+KGLDLVRR+WC+ SKDTG++V ++ILSG+ + V+ +IH HLE LA MR G + + +Y ITKGL+K P+EYPD KSQPHVQVA+ MLK + VN G HIPY++ K ++S AERARHP+++LR++G L+ DVEWYL+QQI+PPV+RLCEPIEG S VLAEK+GLDAS++ G D D+ +TP S L D ERF++VE + C C E++F GV+ T G + GL C N C +WG ++ C + + +++ + +R YY + ++CD+ C L TR V+G C RGC G++ +S++++Y LK+ E+LF++D A T+ +++ + + I + + ++S+G+NWI P W+ +F Sbjct: 83 ELGERVKKEVNRLYRTLELEIDGIFRSMLLLKKKKYAAKTVEEGPNGEVKYGQELKGLDLVRRDWCIQSKDTGRYVTEQILSGQESDIVIENIHSHLEELATKMRAGNLPLEKYTITKGLSKHPNEYPDGKSQPHVQVAMVMLKNNRPVNTGDHIPYIITVSEEAEAEDKKPKSSSSAERARHPEEILRSNGALKPDVEWYLTQQILPPVARLCEPIEGMSQQVLAEKLGLDASRYNHAVRTSGDIDADELIDYTPASSLSDTERFKEVEKFYLHCYGCGVESQFPGVYHVV-TNSQTGNQNTVSGLHCTNPDCLRPMFWGHATQFECFARISNNISIWTQDVMRRYYSSAIRCDEPGCSLETRQLSVVGGVCLRRGCNGKMCSVFSERSVYTHLKYMESLFNIDHASTQWNKKKKKQDDSYALVKNDETIFKELHKVAMRGLESNGFNWISPAFWNGMF 541
BLAST of mRNA_H-paniculata_contig1472.2819.1 vs. uniprot
Match: A0A7S1BTL0_9STRA (DNA polymerase (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BTL0_9STRA) HSP 1 Score: 426 bits (1096), Expect = 3.490e-135 Identity = 217/451 (48.12%), Postives = 303/451 (67.18%), Query Frame = 1 Query: 1 EIGNQVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVENANGSITYEKEMKGLDLVRREWCVLSKDTGKFVLDRILSGEAREAVVTSIHEHLEGLAVSMRRGEVAVPQYVITKGLNKAPHEYPDAKSQPHVQVALAMLKAGKSVNVGHHIPYVMCKIAGAASPAERARHPDDVLRTDGKLEVDVEWYLSQQIVPPVSRLCEPIEGTSMAVLAEKMGLDASKFKSHTPGDGGDDQDDWGFTPTSRLPDKERFRDVELLKMTCRACRQEAEFRGVFSWDRTKPVNGPGDVQP--GLMCPNAACGAFYWGAGSEAGCISTLYQRLTLNVRKHLRVYYQTQLQCDDSSCGLRTRSAGVMGVACPGRGCQGRLVREYSDKALYDQLKFYETLFDVDRAQTRVSEQFNLKPTDLPVSAEHRQILGLVGRRIQDDVQSSGYNWIRPTLWSSVF 1347 E+G +VKREVNKLY++LEL++DG+++SMLLLKKKKYAALV+ N T KE+KGLDLVRR+WC+ SKD+G+FV+D+ILSG+ RE V+ +IH HLE LA MR E+A+ +YVITK L+K P EYPDAKSQPHV VAL MLK + ++ G HIPYV+C + + AERARHP+++ R+ G L+VD+EWYL+ QI+PP+SRL EPIEGTS A +AEK+GLD+SKF H P ++ +TP S PD+ERF+D L++TC C + EF GVF GD P GL C N AC A WG S ++ + ++ +R+H++ YY + L CDDSSCGL+T G C +GC G LV E +K L+ ++K+ E+LF D ++ E+FN K + +S E R++ + +++ ++ + YNW+ P L+S++F Sbjct: 709 ELGERVKREVNKLYRTLELEIDGIYRSMLLLKKKKYAALVM----NDDGTESKELKGLDLVRRDWCIQSKDSGRFVIDQILSGQEREQVIDNIHRHLEELAKKMRENELALDKYVITKSLSKHPKEYPDAKSQPHVLVALDMLKNNRPISTGDHIPYVICLENESKNFAERARHPEEIERSAGALKVDIEWYLNHQILPPLSRLIEPIEGTSQATIAEKLGLDSSKFIKHVPTTY-TEETLVDYTPESSRPDRERFKDATKLQITCLKCGETNEFPGVF-------YTPAGDTTPISGLACTNPACSAPLWGDASHWNILTRVSNATSMLLREHVQKYYGSALVCDDSSCGLKTHQLSNFGSMCLQQGCNGHLVEECDEKFLFTEMKYAESLFSFDHGCKQLEEKFNKKELERYISKEDREVFSSLHELMKNILKLNAYNWVSPKLFSALF 1147
BLAST of mRNA_H-paniculata_contig1472.2819.1 vs. uniprot
Match: B7S420_PHATC (DNA polymerase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7S420_PHATC) HSP 1 Score: 410 bits (1054), Expect = 4.420e-129 Identity = 203/460 (44.13%), Postives = 298/460 (64.78%), Query Frame = 1 Query: 1 EIGNQVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVENANGSITYEKEMKGLDLVRREWCVLSKDTGKFVLDRILSGEAREAVVTSIHEHLEGLAVSMRRGEVAVPQYVITKGLNKAPHEYPDAKSQPHVQVALAMLKAGKSVNVGHHIPYVMC---------KIAGAASPAERARHPDDVLRTDGKLEVDVEWYLSQQIVPPVSRLCEPIEGTSMAVLAEKMGLDASKFKSHTPGDGGDDQDDW-GFTPTSRLPDKERFRDVELLKMTCRACRQEAEFRGVFSWDRTKPVNGPGDVQPGLMCPNAAC-GAFYWGAGSEAGCISTLYQRLTLNVRKHLRVYYQTQLQCDDSSCGLRTRSAGVMGVACPGRGCQGRLVREYSDKALYDQLKFYETLFDVDRAQTRVSEQFNLKPTDLPVSAEHRQILGLVGRRIQDDVQSSGYNWIRPTLWSSVF 1347 E+G +VK+EVN+LY++LEL++DG+F+SMLLLKKKKYAA V E NG + Y +E+KGLDLVRR+WC+ SKDTG++V ++ILSG+ + V+ +IH HLE LA MR G + + +Y ITKGL+K P+EYPD KSQPHVQVA+ MLK + VN G HIPY++ K ++S AERARHP+++LR++G L+ DVEWYL+QQI+PPV+RLCEPIEG S VLAEK+GLDAS++ G D D+ +TP S L D ERF++VE + C C E++F GV+ T G + GL C N C +WG ++ C + + +++ + +R YY + ++CD+ C L TR V+G C RGC G++ +S++++Y LK+ E+LF++D A T+ +++ + + I + + ++S+G+NWI P W+ +F Sbjct: 683 ELGERVKKEVNRLYRTLELEIDGIFRSMLLLKKKKYAAKTVEEGPNGEVKYGQELKGLDLVRRDWCIQSKDTGRYVTEQILSGQESDIVIENIHSHLEELATKMRAGNLPLEKYTITKGLSKHPNEYPDGKSQPHVQVAMVMLKNNRPVNTGDHIPYIITVSEEAEAEDKKPKSSSSAERARHPEEILRSNGALKPDVEWYLTQQILPPVARLCEPIEGMSQQVLAEKLGLDASRYNHAVRTSGDIDADELIDYTPASSLSDTERFKEVEKFYLHCYGCGVESQFPGVYHVV-TNSQTGNQNTVSGLHCTNPDCLRPMFWGHATQFECFARISNNISIWTQDVMRRYYSSTIRCDEPGCSLETRQLSVVGGVCLRRGCNGKMCSVFSERSVYTHLKYMESLFNIDHASTQWNKKKKKQDDSYALVKNDETIFKELHKVAMRGLESNGFNWISPAFWNGMF 1141
BLAST of mRNA_H-paniculata_contig1472.2819.1 vs. uniprot
Match: A0A7S2L169_9STRA (DNA polymerase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L169_9STRA) HSP 1 Score: 417 bits (1072), Expect = 5.730e-129 Identity = 220/461 (47.72%), Postives = 299/461 (64.86%), Query Frame = 1 Query: 1 EIGNQVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVENANGSITYEKEMKGLDLVRREWCVLSKDTGKFVLDRILSGEAREAVVTSIHEHLEGLAVSMRRGEVAVPQYVITKGLNKAPHEYPDAKSQPHVQVALAMLKAGKSVNVGHHIPYVMCKIAGAASP-------AERARHPDDVLRTDGKLEVDVEWYLSQQIVPPVSRLCEPIEGTSMAVLAEKMGLDASKFKSHTPGDGGDDQDDWGFTPTSRLPDKERFRDVELLKMTCRACRQEAEFRGVFSWDRTKPV-NGPGDVQPGLMCPNAACGA-FYWGAGSEAGCISTLYQRLTLNVRKHLRVYYQTQLQCDDSSCGLRTRSAGVMGVACPGRGCQGRLVREYSDKALYDQLKFYETLFDVDRAQTRVSEQ---FNLKPTDLPVSAEHRQILGLVGRRIQDDVQSSGYNWIRPTLWSSVF 1347 E+GN+VKREVN+LYK+LEL++DGVF+SMLLLKKKKYAA+ + + G IT++KEMKGLDLVRR+WC+ SKD+GK++LD+ILSG+ +E VV +IH+HLE +A MR G++ + +Y ITKGLNK P++YPDAK Q HV VA ML SV +G HIPY++ + P AERARHPD++ R+ G L+ DVEWYL+QQI+PP+SRLCEPIEGTS +LAEK+GLD+SK+ S + DD D +TP S LPD+ERF+DVE MTC AC + AEF GVF TK V NG VQ G CPN C WG A C + + ++ + ++ + YY ++CDD CGL TR V C GC GR+ YS+ L QLK++++LFD++ A ++S+ K + + + L+ D + SGYNW+ + ++F Sbjct: 1100 ELGNRVKREVNRLYKTLELEIDGVFRSMLLLKKKKYAAVTMAKGPGGKITFDKEMKGLDLVRRDWCIQSKDSGKYILDQILSGDEKEVVVNNIHDHLEKVAEKMRSGDLPLDKYTITKGLNKHPNDYPDAKGQAHVFVAKRMLAKNISVTIGAHIPYIITESEKEDGPSSKKTLAAERARHPDEIARSKGALKPDVEWYLAQQILPPISRLCEPIEGTSPGILAEKLGLDSSKYNSISVDINEDDIVD--YTPASCLPDEERFKDVEKFVMTCAACDESAEFPGVFRL--TKDVENGMTFVQSGFRCPNPNCARPDNWGEEDVAFCGAKVLNKINMMKKEMQKKYYDGLVRCDDPMCGLETRQLSVCEGCCLKAGCNGRMKLVYSESTLQTQLKYFDSLFDIEHACKQLSKAKATITEKEVLKNLRKDDKSTFKLLHGFTSDSLNKSGYNWVTNQFFQTLF 1556
BLAST of mRNA_H-paniculata_contig1472.2819.1 vs. uniprot
Match: A0A7S3P4R5_9STRA (DNA-directed DNA polymerase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P4R5_9STRA) HSP 1 Score: 392 bits (1008), Expect = 1.100e-127 Identity = 211/463 (45.57%), Postives = 288/463 (62.20%), Query Frame = 1 Query: 4 IGNQVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVENANGS-ITYEKEMKGLDLVRREWCVLSKDTGKFVLDRILSGEAREAVVTSIHEHLEGLAVSMRRGEVAVPQYVITKGLNKAPHEYPDAKSQPHVQVALAMLKAGKSVNVGHHIPYVMCKIAG---------AASPAERARHPDDVLRTDGKLEVDVEWYLSQQIVPPVSRLCEPIEGTSMAVLAEKMGLDASKFKSHT-PGDGGDDQDDWGFTPTSRLPDKERFRDVELLKMTCRACRQEAEFRGVFSWDRTKPVNGPGDVQPGLMCPNAACG-AFYWGAGSEAGCISTLYQRLTLNVRKHLRVYYQTQLQCDDSSCGLRTRSAGVMGVACPGRGCQGRLVREYSDKALYDQLKFYETLFDVDRAQTRVS---EQFNLKPTDLPVSAEHRQILGLVGRRIQDDVQSSGYNWIRPTLWSSVF 1347 +G QVKREVNKLYK+LEL++DG+F+SMLLLKKKKYAA V E +G I Y +E+KGLDLVRR+WCV SKDTG++V ++ILSG+ E V+ +IH HLE LA MR GE+A+ +YVITKGL+K P +YPD KS PHVQVA ML+ + VN G HIPY++ + S ERARHP+++ R++G L+ D+EWYL+QQI+PP++RLCEPIEGTS LA ++GLD++++ + + PG D D + P S LPD+ERF+DVE L++ C +CR E EF GVFS VN G V G++CPN C +WG + C + + + + YYQ CD+ SC L TR V G C RGC G L ++A++ LK+ E L ++D A +V+ + L ++ + ++SS YNWI PT W S+F Sbjct: 166 LGEQVKREVNKLYKTLELEIDGIFRSMLLLKKKKYAAKTVEEQKDGKVIKYGQELKGLDLVRRDWCVQSKDTGRYVTEQILSGQENEVVLHNIHSHLEELAKKMRSGELALDKYVITKGLSKHPKDYPDGKSLPHVQVAKQMLQNNRPVNTGDHIPYIITEHVPPEHLPEGYKVPSATERARHPEEITRSNGALKPDIEWYLTQQILPPIARLCEPIEGTSQQELANRLGLDSTRYSNGSGPGANLDADQDIDYKPASSLPDEERFKDVEKLRLYCLSCRTENEFPGVFS------VNKEGAVVSGMVCPNPECQHPAFWGHTTYFDCYARITNSMAIWTYGLTCRYYQGTYCCDEPSCALVTRQLSVTGPRCLRRGCPGTLQPSTFERAVHTHLKYLERLVNIDHAAEQVAAKGKHGTLADVKRLLNKHEKTAFQGFHEMACKSLESSAYNWITPTFWRSLF 622
BLAST of mRNA_H-paniculata_contig1472.2819.1 vs. uniprot
Match: K0T5T4_THAOC (DNA polymerase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T5T4_THAOC) HSP 1 Score: 401 bits (1031), Expect = 8.660e-127 Identity = 209/465 (44.95%), Postives = 297/465 (63.87%), Query Frame = 1 Query: 1 EIGNQVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVV-ENANGSITYEKEMKGLDLVRREWCVLSKDTGKFVLDRILSGEAREAVVTSIHEHLEGLAVSMRRGEVAVPQYVITKGLNKAPHEYPDAKSQPHVQVALAMLKAGKSVNVGHHIPYVMCKIAGAA-----------SPAERARHPDDVLRTDGKLEVDVEWYLSQQIVPPVSRLCEPIEGTSMAVLAEKMGLDASKFKSHTPGDGGDDQDDWGFTPTSRLPDKERFRDVELLKMTCRACRQEAEFRGVFSWDRTKPVNGPGDVQPGLMCPNAACGA-FYWGAGSEAGCISTLYQRLTLNVRKHLRVYYQTQLQCDDSSCGLRTRSAGVMGVACPGRGCQGRLVREYSDKALYDQLKFYETLFDVDRAQTRVS---EQFNLKPTDLPVSAEHRQILGLVGRRIQDDVQSSGYNWIRPTLWSSVF 1347 E+GN+VKREVN+LYK+LEL++DG+F+SMLLLKKKKYAAL + + G ++KE+KGLDLVRR+WC+ SKD+GK+V+D+ILSGE RE +V++IH+HLE +A MR GE+++ +YVITKGLNK P+EYPD KS PHV VA MLK K+V++G HIPYV+ + A + +ERARHPD++ R+ G+L+ D++WYL+ QI+P +SRLCEPIEGTS +LAEK+GLD+SK+K+ + DD D +TP S LPD+ERF+DVE + C +C E+EF GVF + +G Q G CPN +C + WG C + + + L + R YY +CDD C L TR V C GC GR+ Y++ +L QLK+ ++LFD+ A+ ++ K D +S E + ++ + SGYNW+ + + ++F Sbjct: 552 ELGNKVKREVNRLYKTLELEIDGIFRSMLLLKKKKYAALTITTDGPGGKFKFDKELKGLDLVRRDWCLQSKDSGKYVIDQILSGEDRELIVSNIHDHLENVAKKMRSGELSLDKYVITKGLNKHPNEYPDGKSLPHVHVAKTMLKNHKAVSIGDHIPYVITESKDAEEGGNSAANSKKNSSERARHPDEIERSSGELKPDIDWYLNNQILPTISRLCEPIEGTSPGILAEKLGLDSSKYKAISVNIDEDDIVD--YTPASCLPDEERFKDVEKFNVLCSSCGTESEFPGVFRLVKDSD-SGMTFCQSGFRCPNPSCHSPNNWGEADLFSCTAKILNGMNLLKQNVQRKYYDGLTRCDDPMCDLETRQVSVYEGCCLKAGCNGRMRTVYTESSLQTQLKYLDSLFDMAHAKKKLEGSGSTITEKEVDKSISKEDKDAFAMLHGFSGHSLNKSGYNWVSGSFFQTLF 1013 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1472.2819.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1472.2819.1 >prot_H-paniculata_contig1472.2819.1 ID=prot_H-paniculata_contig1472.2819.1|Name=mRNA_H-paniculata_contig1472.2819.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=457bp EIGNQVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVENANGSITback to top mRNA from alignment at H-paniculata_contig1472:15175..21603- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1472.2819.1 ID=mRNA_H-paniculata_contig1472.2819.1|Name=mRNA_H-paniculata_contig1472.2819.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6429bp|location=Sequence derived from alignment at H-paniculata_contig1472:15175..21603- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1472:15175..21603- >mRNA_H-paniculata_contig1472.2819.1 ID=mRNA_H-paniculata_contig1472.2819.1|Name=mRNA_H-paniculata_contig1472.2819.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2742bp|location=Sequence derived from alignment at H-paniculata_contig1472:15175..21603- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |