mRNA_H-paniculata_contig1471.2814.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1471.2814.1
Unique NamemRNA_H-paniculata_contig1471.2814.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig1471.2814.1 vs. uniprot
Match: D8LJ59_ECTSI (Metacaspase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ59_ECTSI)

HSP 1 Score: 437 bits (1124), Expect = 1.320e-142
Identity = 215/303 (70.96%), Postives = 252/303 (83.17%), Query Frame = 2 
Query:  467 KCSAHRAAAIPDHEFSAEVEGAIKADVRMFSGCQDEQTSADVHDVAKFGLPDASGAGGACTNAVLVNLKDHKPDSWMSLLKGMRATLKQKKFKQVPQLSTSRELDISQPFALSGGTE-GNHKALLIGINYKGMGAGELKGCHNDVESMKGFIPEHGYPTEEGPNLRIITDDGVHEDPTRENITNGMEWLIAGAKAGDSLFMHYSGHGGSVRDLSGDEEDSKDETMVPLDYAKKGQIKDDEILETLVMPLDAGVTLTVVMDCCHSGSILDLPYSFNANDNELQAVSSGRGVTKTHKKGNFNMRK 1372
            K   HRA  IPD EF AE+ G I+ADVRMFSGC+D QTSADVHDVAKFGLPDA+GAGGACTNAVL N+KD KPDSWMSLLKGMR+TLK+KKFKQ+PQL+TS+++DI  PF LSGG E GNHKALLIGINY G G GELKGCHNDV+ M+ +I  HGYP + G NL+I++DDG HE+P++ENI   ++WL+ GAKAGDSLFMHYSGHGGSV+D +GDEED+KDETM+P+DY K GQIKDDEIL+ LVMPL  GV L+VVMDCCHSGSILDLPYSF+A D  L+ V +G G     KK NFN++K
Sbjct:   46 KKRGHRAKDIPDEEFDAEIAGGIRADVRMFSGCEDVQTSADVHDVAKFGLPDATGAGGACTNAVLANVKDSKPDSWMSLLKGMRSTLKEKKFKQIPQLATSKKMDIHSPFDLSGGDESGNHKALLIGINYTG-GKGELKGCHNDVKQMREYITTHGYPAD-GANLKIVSDDGEHEEPSKENILKAIKWLVHGAKAGDSLFMHYSGHGGSVKDNTGDEEDNKDETMIPVDYMKSGQIKDDEILKELVMPLPEGVVLSVVMDCCHSGSILDLPYSFDAKDGALELVEAG-GSGVMQKKKNFNVKK 345
[Close]
BLAST of mRNA_H-paniculata_contig1471.2814.1 vs. uniprot
Match: D7G061_ECTSI (Metacaspase n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G061_ECTSI)

HSP 1 Score: 390 bits (1002), Expect = 8.170e-112
Identity = 190/299 (63.55%), Postives = 229/299 (76.59%), Query Frame = 2 
Query:  482 RAAAIPDHEFSAEVEGAIKADVRMFSGCQDEQTSADVHDVAKFGLPDASG-AGGACTNAVLVNLKDHKPDSWMSLLKGMRATLKQKKFKQVPQLSTSRELDISQPFALSGGTEGNHKALLIGINYKGMGAGELKGCHNDVESMKGFIPEHGYPTEEGPNLRIITDDGVHEDPTRENITNGMEWLIAGAKAGDSLFMHYSGHGGSVRDLSGDEEDSKDETMVPLDYAKKGQIKDDEILETLVMPLDAGVTLTVVMDCCHSGSILDLPYSFNANDNELQAVSSGRGVTKTHKKGNFNMRKM 1375
            RA  + D +F  E+   IKADVRMFSGCQD+QTSADVHDV KFG+P++ G AGGACTNA+LVN+KD +PDSWMSLLKGMR TL  KKFKQ+PQ++TS++LDI  PF+L+GG  G H+ALLIGINY G  + ELKGCHNDV  MK +I EHGYP EEG +L+I+ DDG H  PTR NI   +EWL+ GA  GDSLFMHYSGHGGSV D   +E+D +DETM+P DY+  G IKDDE+L  LV+PL  GV L+VV+DCCHSGSILDLPY+F+A++  LQ V  G G     KK  FNM K+
Sbjct:   34 RAEDMSDDDFDTEIADEIKADVRMFSGCQDKQTSADVHDVTKFGVPNSDGGAGGACTNALLVNVKDDEPDSWMSLLKGMRTTLSTKKFKQIPQMATSKKLDIHSPFSLAGGEGGKHRALLIGINYVGDPSVELKGCHNDVAQMKDYIVEHGYPAEEGEDLKIVMDDGEHTAPTRANIIEAIEWLVEGAAPGDSLFMHYSGHGGSVEDTDNNEKDKRDETMIPTDYSMSGHIKDDELLSELVLPLPEGVVLSVVVDCCHSGSILDLPYTFDADEGALQLVDDG-GSGVVLKKAKFNMTKI 331
[Close]
BLAST of mRNA_H-paniculata_contig1471.2814.1 vs. uniprot
Match: D8LTK1_ECTSI (Metacapase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTK1_ECTSI)

HSP 1 Score: 387 bits (993), Expect = 1.280e-110
Identity = 190/299 (63.55%), Postives = 227/299 (75.92%), Query Frame = 2 
Query:  482 RAAAIPDHEFSAEVEGAIKADVRMFSGCQDEQTSADVHDVAKFGLPDASG-AGGACTNAVLVNLKDHKPDSWMSLLKGMRATLKQKKFKQVPQLSTSRELDISQPFALSGGTEGNHKALLIGINYKGMGAGELKGCHNDVESMKGFIPEHGYPTEEGPNLRIITDDGVHEDPTRENITNGMEWLIAGAKAGDSLFMHYSGHGGSVRDLSGDEEDSKDETMVPLDYAKKGQIKDDEILETLVMPLDAGVTLTVVMDCCHSGSILDLPYSFNANDNELQAVSSGRGVTKTHKKGNFNMRKM 1375
            RA  + D +F  E+   IKADVRMFSGCQD+QTSADVHDV KFG+P + G AGGACTNA+LVN+KD +PDSWMSLLKGMR TL  KKFKQ+PQ++TS++LDI  PF+L+GG  G H+ALLIGINY G  + ELKGCHNDV  MK +I EHGY + EG +L+I+ DDG H  PTR NI   +EW + GA  GDSLFMHYSGHGGSV D   +E+D +DETM+P+DY   G IKDDE+L  LV+PL  GV L+VVMDCCHSGSILDLPY+F+A++  LQ V  G G    HKK  FNM KM
Sbjct:   30 RAEDMSDDDFDTEIADGIKADVRMFSGCQDQQTSADVHDVTKFGVPKSDGGAGGACTNALLVNVKDDEPDSWMSLLKGMRTTLSTKKFKQIPQMATSKKLDIHSPFSLAGGEGGKHRALLIGINYVGDKSAELKGCHNDVAQMKDYIVEHGY-SGEGEDLKIVMDDGEHTAPTRANIIEAIEWFVEGAAPGDSLFMHYSGHGGSVEDNDNNEKDKRDETMIPVDYRVSGHIKDDELLAELVLPLPEGVVLSVVMDCCHSGSILDLPYTFDADEGALQLVDDG-GSAVVHKKAKFNMSKM 326
[Close]
BLAST of mRNA_H-paniculata_contig1471.2814.1 vs. uniprot
Match: D7G0P1_ECTSI (Metacapase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0P1_ECTSI)

HSP 1 Score: 337 bits (864), Expect = 5.170e-104
Identity = 176/292 (60.27%), Postives = 212/292 (72.60%), Query Frame = 2 
Query:  461 GGKCSAHRAAAIPDHE-FSAEVEGAIKADVRMFSGCQDEQTSADVHDVAKFGLPDASGAGGACTNAVLVNLKDHKPDSWMSLLKGMRATLKQKKFKQVPQLSTSRELDISQPFAL---SGGTEGNHKALLIGINYKGMGAGELKGCHNDVESMKGFIPEHGYPTEEGPNLRIITDDGVHEDPTRENITNGMEWLIAGAKAGDSLFMHYSGHGGSVRDLSGDEEDSKDETMVPLDYAKKGQIKDDEILETLVMPLDAGVTLTVVMDCCHSGSILDLPYSFNANDNELQAVSSG 1324
            GG  +A    A  D E ++ +V  AIKADVRMFSGC D QTSADV DV+KFGLPDA GAGGACTNA+L+ L D   DSW+ LLKGM++ LK K+F QVPQLSTSRE+D++  F+L   +GG  G+ K LLIGINY G   GEL GCHNDV+ MK +I  HGY  +   + +++ DD VH  P  + +  G  WL A AKAGDSLFMHYSGHGGSV+D SGDE D+ DET+VP+DY   GQI DDEIL+ LVM L  GVTLTVVMDCCHSGSILDLPY+  A++  + AV +G
Sbjct:   34 GGGSAATGTRAPEDAEAYAKKVAEAIKADVRMFSGCMDSQTSADVKDVSKFGLPDADGAGGACTNAMLLTLSDEHSDSWLGLLKGMQSVLKTKRFSQVPQLSTSREIDVNDKFSLRNTAGG--GSTKCLLIGINYIGQ-QGELAGCHNDVDMMKKYITTHGYSMDPA-DCKVLMDDNVHGMPDHKGVIEGFRWLTADAKAGDSLFMHYSGHGGSVKDTSGDEADNMDETLVPVDYKSSGQITDDEILKELVMVLPEGVTLTVVMDCCHSGSILDLPYALKADEGTISAVEAG 321
[Close]
BLAST of mRNA_H-paniculata_contig1471.2814.1 vs. uniprot
Match: A0A836C803_9STRA (Metacapase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C803_9STRA)

HSP 1 Score: 315 bits (806), Expect = 2.250e-95
Identity = 157/275 (57.09%), Postives = 199/275 (72.36%), Query Frame = 2 
Query:  500 DHEFSAEVEGAIKADVRMFSGCQDEQTSADVHDVAKFGLPDASGAGGACTNAVLVNLKDHKPDSWMSLLKGMRATLKQKKFKQVPQLSTSRELDISQPFALSGGTEGNHKALLIGINYKGMGAGELKGCHNDVESMKGFIPEHGYPTEEGPNLRIITDDGVHEDPTRENITNGMEWLIAGAKAGDSLFMHYSGHGGSVRDLSGDEEDSKDETMVPLDYAKKGQIKDDEILETLVMPLDAGVTLTVVMDCCHSGSILDLPYSFNANDNELQAVSSG 1324
            D E++ + E A+ A+VRM SGCQD QTSADV DV+ FGLPD+ GAGGACTNA+L++      ++W SLL+ M+A LK KK+ Q+PQLSTSR+LD+S PF +      NHKALLIGINY G   GELKGCHNDVE+MK +I E GY T+    + ++ DDG H+DPT  N+     WL+ GA+ GDSLFMHYSGHGGS+ D   +E D+KDETMVPLDY   GQI+DD++ + LV PL  GV +T+VMDCCHSGSI DLPY+     + + AV +G
Sbjct:   56 DPEYAKKAEAAVCANVRMISGCQDAQTSADVQDVSSFGLPDSEGAGGACTNALLLSAAQGS-NTWTSLLQKMQAVLKTKKYTQIPQLSTSRDLDLSAPFDIMLPDSKNHKALLIGINYVGQ-QGELKGCHNDVEAMKEYIIEQGY-TDSPDTMMVLMDDGKHKDPTAANLAKAFAWLVDGAQEGDSLFMHYSGHGGSMPDDESEEADAKDETMVPLDYQTVGQIRDDDLYKMLVAPLPVGVEMTIVMDCCHSGSIFDLPYNIAMTGDLVAAVEAG 327
[Close]
BLAST of mRNA_H-paniculata_contig1471.2814.1 vs. uniprot
Match: A0A7S0YNU0_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YNU0_9CRYP)

HSP 1 Score: 304 bits (778), Expect = 4.340e-91
Identity = 156/277 (56.32%), Postives = 194/277 (70.04%), Query Frame = 2 
Query:  506 EFSAEVEGAIKADVRMFSGCQDEQTSADVHDVAKFGLP---DASGAGGACTNAVLVNLKDHKPDSWMSLLKGMRATLKQKKFKQVPQLSTSRELDISQPFALSGGT-EGNHKALLIGINYKGMGAGELKGCHNDVESMKGFIPEHGYPTEEGPNLRIITDDGVHEDPTRENITNGMEWLIAGAKAGDSLFMHYSGHGGSVRDLSGDEEDSKDETMVPLDYAKKGQIKDDEILETLVMPLDAGVTLTVVMDCCHSGSILDLPYSFNANDNELQAVSSG 1324
            EF++    A+ ADVRMFSGC+DEQTSADV+DV+ FGLP      GAGGACTN+++++L      +W  LL+ MR  L++K F Q+PQLS+SR L ++  F +      G  KAL IGINY G   GEL+GCHNDVE MK +I   G    +  N +++ DDG HE P+  NI  G +WL+ GA++GDSLFMHYSGHGGS+ D +GDE D +DETM P+DYA  GQI+DD I E LV  L  G  LTVVMDCCHSGSILDLPY+F A+DN LQA SSG
Sbjct:   71 EFASRAAQAVAADVRMFSGCKDEQTSADVYDVSSFGLPANTGPGGAGGACTNSIVLSLHKQPECTWTQLLQNMRQVLREKNFTQIPQLSSSRSLSLNSQFTVKNPAGNGRTKALYIGINYVGQ-QGELRGCHNDVEMMKTYI--EGKQGFDPSNAKVLMDDGRHESPSHLNILQGFQWLVNGAQSGDSLFMHYSGHGGSMPDDNGDESDGRDETMCPVDYASAGQIRDDVIYEQLVAMLPDGCQLTVVMDCCHSGSILDLPYNFEASDNNLQAASSG 344
[Close]
BLAST of mRNA_H-paniculata_contig1471.2814.1 vs. uniprot
Match: L1I610_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1I610_GUITC)

HSP 1 Score: 300 bits (768), Expect = 1.510e-89
Identity = 154/293 (52.56%), Postives = 205/293 (69.97%), Query Frame = 2 
Query:  506 EFSAEVEGAIKADVRMFSGCQDEQTSADVHDVAKFGLPDASG---AGGACTNAVLVNLKDHKPDSWMSLLKGMRATLKQKKFKQVPQLSTSRELDISQPFALSGGTEGNHKALLIGINYKGMGAGELKGCHNDVESMKGFIPEHGYPTEEGPNLRIITDDGVHEDPTRENITNGMEWLIAGAKAGDSLFMHYSGHGGSVRDLSGDEEDSKDETMVPLDYAKKGQIKDDEILETLVMPLDAGVTLTVVMDCCHSGSILDLPYSFNANDNELQAVSSGRGVTKTHKKGNFNMRKM 1375
            +F  +   A+ A+V MFSGC+DEQTSADV+D + FGLP  SG   AGGACTN++++ L ++   +W+ LL  MR  LK+K F QVPQLS+S+E+ +   F L+  +    KALLIGINY G   GEL+GCHNDV  MK +I ++GY   +  ++R++ DDG + +PTR NI + ++WL+  AK+GD LFMHYSGHGGS++D +GDE D  DETMVP+DY   GQI+DD I + LV PL  GV LTV+MDCCHSG+ILDLP+SF AND   Q  +SG  +      GNFN +K+
Sbjct:   86 DFKQKAAQALPAEVHMFSGCRDEQTSADVYDTSSFGLPADSGPGGAGGACTNSIMLALSENPNPTWIDLLNRMRTILKEKGFTQVPQLSSSKEISLDGNFQLAAASSST-KALLIGINYVGQ-KGELRGCHNDVLQMKDYILKNGY---DPASMRVLMDDGSNMNPTRANILDSIKWLVKDAKSGDCLFMHYSGHGGSMKDDNGDEADGMDETMVPVDYTSTGQIRDDIIFQELVAPLPQGVKLTVIMDCCHSGTILDLPFSFTANDQNTQNYTSGMTLPMN---GNFNWKKI 370
[Close]
BLAST of mRNA_H-paniculata_contig1471.2814.1 vs. uniprot
Match: A0A7S0MFT1_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MFT1_9CRYP)

HSP 1 Score: 295 bits (755), Expect = 2.390e-88
Identity = 150/272 (55.15%), Postives = 189/272 (69.49%), Query Frame = 2 
Query:  506 EFSAEVEGAIKADVRMFSGCQDEQTSADVHDVAKFGLP-DAS--GAGGACTNAVLVNLKDHKPDSWMSLLKGMRATLKQKKFKQVPQLSTSRELDISQPFALSGGTEGNHKALLIGINYKGMGAGELKGCHNDVESMKGFIPEHGYPTEEGPNLRIITDDGVHEDPTRENITNGMEWLIAGAKAGDSLFMHYSGHGGSVRDLSGDEEDSKDETMVPLDYAKKGQIKDDEILETLVMPLDAGVTLTVVMDCCHSGSILDLPYSFNANDNELQA 1312
            E+ + V   I A+VRMFSGC+D QTSADV   A F LP DA   GAGGACTNA+L  +  +   +W  LL  MR  L  K+F+QVPQLS S+E+ +S PFAL    +G  +AL IGINY G   GEL+GCHNDVE MK F+ + G+   +  N++ + DDG +  P +  +   ++WL+ GAK GDSLFMHYSGHGG +RD +GDE D  DET+VPLDY  KGQI+DD++L+ LV+PL  GV LTVVMDCCHSGSILDLPY F A +  +QA
Sbjct:   32 EYRSRVAQVIPAEVRMFSGCKDAQTSADVSSSAGFSLPADAGPGGAGGACTNAMLEVINRNPSTTWKDLLADMRVVLATKRFEQVPQLSASKEMSLSTPFALKKSGQGRTRALFIGINYVGHSPGELRGCHNDVEKMKRFVLKQGF---DEANMKFLLDDGKNIVPNKVEVLTALKWLVQGAKEGDSLFMHYSGHGGQLRDDTGDEADGFDETLVPLDYQTKGQIRDDDLLKELVLPLPEGVLLTVVMDCCHSGSILDLPYEFTATEANMQA 300
[Close]
BLAST of mRNA_H-paniculata_contig1471.2814.1 vs. uniprot
Match: A0A7S1H0Z8_HEMAN (Hypothetical protein n=3 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H0Z8_HEMAN)

HSP 1 Score: 295 bits (754), Expect = 5.200e-88
Identity = 158/309 (51.13%), Postives = 208/309 (67.31%), Query Frame = 2 
Query:  461 GGKCSAHRAAAIPDHEFSAEVEGAIKADVRMFSGCQDEQTSADVHDVAKFGLPDASG---AGGACTNAVLVNLKDHKPDSWMSLLKGMRATLKQKKFKQVPQLSTSRELDISQPFALSGGT-EGNHKALLIGINYKGMGAGELKGCHNDVESMKGFIPE-HGYPTEEGPNLRIITDDGVHEDPTRENITNGMEWLIAGAKAGDSLFMHYSGHGGSVRDLSGDEEDSKDETMVPLDYAKKGQIKDDEILETLVMPLDAGVTLTVVMDCCHSGSILDLPYSFNANDNELQAVSSGRGVTKTHKKGNFNMRK 1372
            GGK S  +       EF++    A+ ADVRMFSGC+DEQTSADV+DV+ FGLP  SG   AGGACTN+++++L      +W  LL+ MR  L +K F Q+PQLS+SR + ++  F++   +  G  KAL IGINY G   GEL+GCHNDVE M+ +I E  G+   +  N +++ D+G  E+PT  NI  G +WL   A++GDSLFMHYSGHGGS+RD +GDE D  DETM P+DYA+ GQI+DD I E LV     G  LTVVMDCCHSGSILDLPY+F A+D+ L A +SG  + ++   G+F+  K
Sbjct:   27 GGKPSMPKPDVNNPEEFASRAAQAVAADVRMFSGCKDEQTSADVYDVSSFGLPADSGPGGAGGACTNSMVLSLHKQPECNWTQLLQNMRGVLSEKGFSQIPQLSSSRSMALNSQFSVMNPSGNGRSKALYIGINYVGQ-QGELRGCHNDVEMMRQYIEEKQGF---DPSNAKVLMDNGSDEEPTAANILQGFQWLTEDAESGDSLFMHYSGHGGSMRDDNGDESDGMDETMCPVDYARAGQIRDDIIYEQLVSMCPEGCQLTVVMDCCHSGSILDLPYNFEASDSNLAAAASG-SMPQSLPNGSFDFNK 330
[Close]
BLAST of mRNA_H-paniculata_contig1471.2814.1 vs. uniprot
Match: A0A7S0EWY7_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EWY7_9CRYP)

HSP 1 Score: 294 bits (753), Expect = 1.850e-87
Identity = 152/293 (51.88%), Postives = 203/293 (69.28%), Query Frame = 2 
Query:  506 EFSAEVEGAIKADVRMFSGCQDEQTSADVHDVAKFGLPDASG---AGGACTNAVLVNLKDHKPDSWMSLLKGMRATLKQKKFKQVPQLSTSRELDISQPFALSGGTEGNHKALLIGINYKGMGAGELKGCHNDVESMKGFIPEHGYPTEEGPNLRIITDDGVHEDPTRENITNGMEWLIAGAKAGDSLFMHYSGHGGSVRDLSGDEEDSKDETMVPLDYAKKGQIKDDEILETLVMPLDAGVTLTVVMDCCHSGSILDLPYSFNANDNELQAVSSGRGVTKTHKKGNFNMRKM 1375
            EF  +   A+ ++V MFSGC+DEQTSADV+D + FGLP  SG   AGGACTN++++ L ++   +W+ LL  MR  LK+K F QVPQLS+S+E+ +   F L+  +    KALLIGINY G   GEL+GCHNDV  MK +I ++GY   +  ++R++ DDG +  P R NI + ++WL+  AK+GD LFMHYSGHGGS++D +GDE D  DETMVP+DYA  GQI+DD I + LV PL  GV L V+MDCCHSG+ILDLP+SF AND   Q  ++G  +      GNFN +K+
Sbjct:   86 EFKQKAAQALPSEVHMFSGCRDEQTSADVYDTSSFGLPADSGPGGAGGACTNSIMLALTENPNPTWIELLNRMRTILKEKGFTQVPQLSSSKEVAMDSTFQLAAASSST-KALLIGINYVGQ-QGELRGCHNDVLQMKDYIAKNGY---DPASMRVLMDDGSNMVPNRANILDSIKWLVKDAKSGDCLFMHYSGHGGSMKDDNGDEADGMDETMVPVDYASAGQIRDDLIFQELVAPLPQGVKLIVIMDCCHSGTILDLPFSFKANDQNTQNYTNGMTLPMN---GNFNWQKI 370
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1471.2814.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ59_ECTSI1.320e-14270.96Metacaspase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
D7G061_ECTSI8.170e-11263.55Metacaspase n=3 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
D8LTK1_ECTSI1.280e-11063.55Metacapase n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
D7G0P1_ECTSI5.170e-10460.27Metacapase n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A836C803_9STRA2.250e-9557.09Metacapase n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A7S0YNU0_9CRYP4.340e-9156.32Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
L1I610_GUITC1.510e-8952.56Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
A0A7S0MFT1_9CRYP2.390e-8855.15Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A7S1H0Z8_HEMAN5.200e-8851.13Hypothetical protein n=3 Tax=Hemiselmis andersenii... [more]
A0A7S0EWY7_9CRYP1.850e-8751.88Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1471contigH-paniculata_contig1471:401..11706 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score438.7
Seed ortholog evalue3e-120
Seed eggNOG ortholog2880.D8LJ59
Preferred nameMCA5
Hectar predicted targeting categoryother localisation
EggNOG free text desc.cysteine-type peptidase activity
EggNOG OGsKOG1546@1,KOG1546@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons11
Model size2822
Cds size1263
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929171.009008-UTR-H-paniculata_contig1471:400..17871622929171.009008-UTR-H-paniculata_contig1471:400..1787Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1471 401..1787 -
1691480759.065697-UTR-H-paniculata_contig1471:400..17871691480759.065697-UTR-H-paniculata_contig1471:400..1787Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1471 401..1787 -
1622929171.2010808-UTR-H-paniculata_contig1471:11534..117061622929171.2010808-UTR-H-paniculata_contig1471:11534..11706Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1471 11535..11706 -
1691480759.1745443-UTR-H-paniculata_contig1471:11534..117061691480759.1745443-UTR-H-paniculata_contig1471:11534..11706Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1471 11535..11706 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929171.0277104-CDS-H-paniculata_contig1471:1787..18501622929171.0277104-CDS-H-paniculata_contig1471:1787..1850Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1471 1788..1850 -
1691480759.0755897-CDS-H-paniculata_contig1471:1787..18501691480759.0755897-CDS-H-paniculata_contig1471:1787..1850Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1471 1788..1850 -
1622929171.0454173-CDS-H-paniculata_contig1471:2359..25361622929171.0454173-CDS-H-paniculata_contig1471:2359..2536Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1471 2360..2536 -
1691480759.0835245-CDS-H-paniculata_contig1471:2359..25361691480759.0835245-CDS-H-paniculata_contig1471:2359..2536Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1471 2360..2536 -
1622929171.0569391-CDS-H-paniculata_contig1471:3195..33141622929171.0569391-CDS-H-paniculata_contig1471:3195..3314Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1471 3196..3314 -
1691480759.091763-CDS-H-paniculata_contig1471:3195..33141691480759.091763-CDS-H-paniculata_contig1471:3195..3314Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1471 3196..3314 -
1622929171.0733159-CDS-H-paniculata_contig1471:3661..37141622929171.0733159-CDS-H-paniculata_contig1471:3661..3714Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1471 3662..3714 -
1691480759.0998967-CDS-H-paniculata_contig1471:3661..37141691480759.0998967-CDS-H-paniculata_contig1471:3661..3714Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1471 3662..3714 -
1622929171.085427-CDS-H-paniculata_contig1471:4146..42411622929171.085427-CDS-H-paniculata_contig1471:4146..4241Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1471 4147..4241 -
1691480759.1088276-CDS-H-paniculata_contig1471:4146..42411691480759.1088276-CDS-H-paniculata_contig1471:4146..4241Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1471 4147..4241 -
1622929171.0972972-CDS-H-paniculata_contig1471:4743..48631622929171.0972972-CDS-H-paniculata_contig1471:4743..4863Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1471 4744..4863 -
1691480759.1175966-CDS-H-paniculata_contig1471:4743..48631691480759.1175966-CDS-H-paniculata_contig1471:4743..4863Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1471 4744..4863 -
1622929171.114507-CDS-H-paniculata_contig1471:5280..54181622929171.114507-CDS-H-paniculata_contig1471:5280..5418Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1471 5281..5418 -
1691480759.1300719-CDS-H-paniculata_contig1471:5280..54181691480759.1300719-CDS-H-paniculata_contig1471:5280..5418Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1471 5281..5418 -
1622929171.1292133-CDS-H-paniculata_contig1471:6384..65051622929171.1292133-CDS-H-paniculata_contig1471:6384..6505Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1471 6385..6505 -
1691480759.1386464-CDS-H-paniculata_contig1471:6384..65051691480759.1386464-CDS-H-paniculata_contig1471:6384..6505Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1471 6385..6505 -
1622929171.1463645-CDS-H-paniculata_contig1471:7017..72171622929171.1463645-CDS-H-paniculata_contig1471:7017..7217Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1471 7018..7217 -
1691480759.1469433-CDS-H-paniculata_contig1471:7017..72171691480759.1469433-CDS-H-paniculata_contig1471:7017..7217Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1471 7018..7217 -
1622929171.1626308-CDS-H-paniculata_contig1471:7927..80561622929171.1626308-CDS-H-paniculata_contig1471:7927..8056Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1471 7928..8056 -
1691480759.15548-CDS-H-paniculata_contig1471:7927..80561691480759.15548-CDS-H-paniculata_contig1471:7927..8056Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1471 7928..8056 -
1622929171.1879454-CDS-H-paniculata_contig1471:11486..115341622929171.1879454-CDS-H-paniculata_contig1471:11486..11534Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1471 11487..11534 -
1691480759.1640596-CDS-H-paniculata_contig1471:11486..115341691480759.1640596-CDS-H-paniculata_contig1471:11486..11534Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1471 11487..11534 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1471.2814.1prot_H-paniculata_contig1471.2814.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1471 1788..11534 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1471.2814.1

>prot_H-paniculata_contig1471.2814.1 ID=prot_H-paniculata_contig1471.2814.1|Name=mRNA_H-paniculata_contig1471.2814.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=421bp
MSMFGNIKEQAQDAVEENADAVKVQVETHISEAMGSLGVGGGEGGASAEG
DMAGQVTEKVNETIEAGMRAVGVNPTHGARAGGHGHGKHHPHGKRAGGKC
SAHRAAAIPDHEFSAEVEGAIKADVRMFSGCQDEQTSADVHDVAKFGLPD
ASGAGGACTNAVLVNLKDHKPDSWMSLLKGMRATLKQKKFKQVPQLSTSR
ELDISQPFALSGGTEGNHKALLIGINYKGMGAGELKGCHNDVESMKGFIP
EHGYPTEEGPNLRIITDDGVHEDPTRENITNGMEWLIAGAKAGDSLFMHY
SGHGGSVRDLSGDEEDSKDETMVPLDYAKKGQIKDDEILETLVMPLDAGV
TLTVVMDCCHSGSILDLPYSFNANDNELQAVSSGRGVTKTHKKGNFNMRK
MKKAQQARRARRAAQQAKEH*
back to top

mRNA from alignment at H-paniculata_contig1471:401..11706-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1471.2814.1 ID=mRNA_H-paniculata_contig1471.2814.1|Name=mRNA_H-paniculata_contig1471.2814.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11306bp|location=Sequence derived from alignment at H-paniculata_contig1471:401..11706- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTGCCATTGCCCTCTAGTTCTGAAACTCTGATTGGTCATACTGGATTTTC
TGTAGTTACATTTTTTTTCAACATGCAGCATATCACTCCGTGTTGAAGAA
CCACCCTCTCATTCCCACCACACAAGAAGTGTTTCACCTGTATCCCTACA
CCCACCAACTGTCAACGAAACGATGAGCATGTTCGGCAACATAAAGGAGC
AGGCGCAGGACGCCGTCGAGGTACGAGACCGAAAAGTGCAGTTCTTGTTG
ATAAGTTCATCTCATGATCATGTTGAGGTGTTATTAGTGATGATTTTCGA
ACACCATGAATCGAGTTAGCTGGATATAAAAAGATGTTTGATGGGAGAGC
GAATTGGACAGCATAGTCGTGAGGCTTTATTTTTCTTTTACGTTGAGTAC
ATGCGCGGTCAGCTGGTGCTGCGGTTGCCTTTTGGCTCCTCCATGTCAAC
TCCCTTACGCAGGTGCAGTTCGCGTGCTACGCTTGGGAGTCCGGAAGTTG
CTGTCCTCTACACAAAAACTGCTCCAAGCGGGCAGCATACCCGTTTTTGA
TTAGCTGACTATTAGACTTCGCTCAAAATGTTTTTTGTCGAATCTTTGGC
GATCGACCAGAGCAAGGAGCTATATTTTGGTAAGGATTTCAAGTGAGTGT
CCATGACAACTGAGTGTGAAAGACCTCATAACAAAAGGCCGAGTCTGGAG
AACTACTATTGGGAGCCACTGTAGCATGATGCCACAATGACGAGACCTAC
CACGCGACATGTTGGCAAGCTTGACCAGGCTGCACGGCGCATTTTCGGGC
GGAGAGAAGTAGAACCCCTACCAATTTGTTCGTTGCCTCTTGTTTGATGT
TCATCCGCTCTTCTTTTTCGCACATCATATTTTGTGGAGCCTGTCGCGGC
TGTCGTTCCGATTCGAAGTACACATTGCCCGTTATTTGTACATATGTTTG
TCGAAGAGCACCCACAAGGATTCACAGTCACTGTTCATGTGCAAGCGTTA
TATTCTCGAGGAAAAATTCTTCGACCCACGTCTGGTTCGCCCCAGTTCGT
GTTCCAAAAAGTAGCCCAAATGCTTTTTGGTCAGTTGTTCCACGAGGCCC
TTACCTGTCATGGGGCTGATCACACAGGGCGGGGGGATAGTATCTGCCGA
GCCTTATAAACAACAAATGCATCGCTTGGATCCACCGAAAAACGAAGCGA
GGGCACCCTCCCTGGCATGCGCTCTTGGACGAGCTGCCCCTAGTATCATT
TCCTTTCTCGCTGTAGAACAAAGCTGTTTCATGACTAAATTTTTTTCTCA
GTTTTTGTCCGCAAACTAGTTCACTATGAAAACCACGTGGTCAATGTAGA
GTACTATGTGGGAAATATGAAAGCTACAAGCTGACGAAATACCCTGCAGT
CCTTTTTTATACAGGACCGTGCCTCGGAGCCGCGGCACGCTCATCACCGC
GCCGCTGTACACTCGGACAGTCATGCCATGTCCTCGTCCGACGGTATTGT
GTAGGTGATGTTTTGCCTGCAAGGTTATATTTTCCACACTCCTGTGCACG
GCAGGCAGCCTGTGCCGATACTGTAGTCTCTTCGAAAAGCTCAGAGTGAT
GAATGTGTTGCTGTTTTTCAGCACCCGTGGTTTCCCAATGAACGTCAAGT
GTACCCACGTGTTCAGGAGGGGCGTCAAGATGTATGCACCCCCACCAGAT
TCTATTGATTGTAGAAATCGTTGTTCCCCCGCCTCCCACCTCATGAAGTA
TGTGTTTTATTGTAACTTTCAGTGAAGAATTGAGGAAAGAACAGGTCACC
GCCTTTCTTTGAAGACTCAATCATACATCTTGCGTCATGTTTCAAGTCGA
TGTCAACATGCTTGTTGGTGCGAGGGCTTGATCCTCCACAGTGCTGATAT
TCGGGTAAAATGCTAATATGTGGCTTATTGATCGTGGGCGTTGCAGCACA
ACATGATGTACTGGACTGAAAAACCTACTTTCCACTTTTTGCATATGGTC
GGATGGAAACTTCACACGAAGGTGAAGGGGAAATATGGATGAAGAACGCA
GCTGATGCAAACAAATGGTGCGCCGGCTTGTGACGACTTCAACGTCATGT
ATCAATGCTGAATAAAATGTTGATGTTGGCCTTCATGTTTTGTATGTTAC
TTGGGGCATTGGCCCCGACGTGTTCCCTCTTGGCGAGAGATGAAGTACCG
TCAGTAGCCAATCTCTCCTCCGTACGCTACTGTACTCTTGTTCCATGTGT
ACTTGGTCTAGTTCATCTCATGTTTCGCGGTGGGCTGGTGTAAATAAGTA
GTATGCTAAGCTCGAAACATTCGAGATTCGCAGTGGAATTTTATCCATCG
TACCAAGCCTTCACCTCTTGAGTATTGCCACTTTGTCTGAGGTGACCACG
TTTTTTCCCGGCACCTGATGGAATTTCAAGACCGGTCTCTGTGATCAAAG
TGCATCTTCTAAAGGGTCGTAGGTTGTGAAGGGATGACTATCTCGCGTGA
AGATATCTTTTGGGCTCGATTCGAAGTTGATCATGGTGTCAACGAGCTTT
CATCTCGCGTTGCACGCACAATTTCTATTATCGCCTGTCGGACCGGAAAT
CTCCATCTGTGAAATCGTTGGCATCTCCACGGATTTCAACTTCCAGTGGC
CCCACAAAAAATGGTGTAAAGATCAGCGACATGGAGCGTTCAATCCTTCC
ACACCAAGGTGACGATATATTTGGGTTACTCGTATTTACAATGTCTGCGT
TTATCAAATAAATTGTAACCACGGACTCCTCTGTACTGCCAGAGCCCGAA
GAAGGGCAATATAGGTACTTGACAGTCGGGCCACGAAACCGTCACGACAG
TGGGGGGAGAACATTTGATGAGGGCTGGAAGTTGTCGTAGGGTTGGAAGT
ATTCGCGTTTCGTAACCGAAATACCTAGTCCCAAACGCGAGAGAATTTAT
ACTGTAATGGTGAACATACTGAGCGTTGAACTAAATATTTGGGAATAAGA
CGTGAAGGAAATATCGTGTGCTATATGGATCGAATAAGTTCACGAGTGGA
CCTTCAGAAATCGAAGATTGATTTCCTGAGAGTCGGTCATGAAAAATGAC
CATGTCTTGAGAGTGCCCAACAACCGATGGAACAGTCGGGTTGGCGTGTA
GAGGGTGACATTACTTTCCAATGCTGACGTCGCCTGCTGGTCTGTCTTTT
GGAATGGACAGGTAAAACCCCTTCGAGAGTTTTTTTCTCCGTGACACTTA
AAACCTCAACACGTTTCATATCCGAAAGCACATAAAGATCCCGTGTTCTG
GCTGGATTCGAACTCGCGATTAATTTTTGTACAGGAAGAATTTCACAGAG
CTACCGTGTTGCAAATTCCCAACTGCGGCATGCGGAACACGAGGATGCCT
TCTCTTACTGAACTAACCAGATGATGAGTGTACATGACGGGGGTTTTAGG
TCAGTTGCGTATGTTGAGTATAACCAGAACTTGGTTCTACTGTAACTGGC
AATAGGGTGGGTAGAAATGGGAAATATAGTTTAAGGGGGCGGGTATTATT
TGGGCCTCTTCCCCCCTGAGCGAAGCGCAACAACGATCGACTACAGTGCA
TGACGTTAATATAAAAGTTTTGAAATTTAATGGCGGTTTTGATCGAGCAG
GAAAACGCCGACGCCGTTAAGGTCCAGGTGGAAACTCACATTAGCGAGGC
CATGGGCAGCCTAGGAGTTGGCGGCGGGGAGGGGGGTGCAAGTGCCGAAG
GAGACATGGCCGGTCAGGTGACGGAAAAGGTGAGCGTACACGACGGTTTC
ACAAAAACCCATTCAAGAGGCGCCTATTGTGATGATATTCCGAGACTGTG
ATGGAGTGAACAATCATAGAGAAGACCCAATGTATACCATGTGGCTAACG
TCGCTTTCTTGACTTTTGACCAGAGTGCTCATCAAAAGACAAGAGAGCTT
GAAAAACGTTCCCATCGATTAATAACCAAAGCATGGGACCTGCACGAGGC
AGGGGCCTCTCCGAACTGCTTCAAAAGTGGTCGTCCAATTTTTAACTGTG
TACGCAACCATCGACTCCCGCTTGTGTAATGATCATTTAAGTAAGATGTG
ACAGAAGTCTTGGACTGTACCTTTCACGAGATCAGTGAGATGGTCCAGCT
ATGGTACCAAAAATGGATACGACGGTGGTTCAACAACGACCGAAAATCAA
CCAGTCAGCCACACCACCTCCAATGAAGGTAACTATTTCCTCACCTACTC
CGCAGCGGAAATCCCCACATATCATAGGATGAGAAAAGCTTTCCCTTGAA
TTGCATTGAAGGTCACATCTTTTGATGCCAGTGTAGCTGTTTGGCGGTTT
GGTAATGTCACTCGATGGGCACTTGTGTGGAATAAAGAATGTCCTTCTCA
TCATGACTAGACTTTCCCCTTTCCGCAACCTGGTTGATCTGAATCCTGTG
GCCCCTCTCGTTTCGTGTCCGATACAATAACTTCGAAAGGTCAACGAAAC
CATTGAGGCAGGCATGAGGGCAGTTGGTGTCAACCCCACGCATGGGGCAC
GCGCAGGTGGACATGGCCACGGGAAACATCACCCACACGGAAAAAGGGCG
GGAGGTAAATGCAGCGCGCACAGAGCCGCCGCGATCCCCGACCATGAGTT
CAGCGCGGAGGTTGAGGGGGCTATCAAGGCCGATGTAAGGTGACCTCTTT
CAGCCTCCGGAAGGCGAAGGCAAAAACCTTTATCCCGCTGCTTCCATACT
ATGATATTTCTACCGAGGTATTTCTACATTTCCTTCAAAAGAGTAGTTAT
TTATTACTCTGCGGAATAGGCACCACCCCGGTTCGGCCGAACCAAGTAGG
CAGTGTGAAGGTTGCACCCACTACGAGACCTCTGACTAGACTTCAAGTCG
TGCTAAGTTCACACGCTACCCTACCTGTTCGGGCGTAGGTCGGGTGACGT
AAGGTTATGATATCAAACCTTGAGCACGAATTCTCGAAGCAATTGATTGA
TTCATTTCGCGTGCTCGTGCACTGTTTTTTCAGAAATTTTTCTATTGCAT
CAACAAATCAACCCAAATGTCCTGGGGGATAAGGCCACGATTTACTGGGT
TATGAGTAAGAGGGAAATGGTGTGAAATGCATCTTCGAAGAGTATCATGT
GACACAGCCTGTCGGATTTTTGTTCTGACATTTCCGTGGTGTATAAAACA
GGATGTTCTCCGGATGCCAGGATGAGCAGACCTCGGCGGATGTGCACGAT
GTGGCCAAATTTGGACTCCCCGACGCTTCTGGTGCCGGAGGCGCTTGCAC
CAACGCTGTCCTTGTTAACCTGGTGCGTTTCGAATCGTCGATGTGGTCAT
CCTCGGCAGGGGTTAAATTAATGTGGCTGGTAAAGTCATCATCCAACTTT
GAGTACCATTGTGAACATCCCTTCTAAATTTTTTAATGGGTTTAGTCTCT
AGCTTTACACACCAACATGCGCATCGCTTTCATGTACACTAGGGGGTGTT
GTCCTAACACTGACAACTGGAAGCGGAATAGTATCATAGCAAAGGGACAC
AGTTGGCTCGGAATGCCCTGTCACGAAATCAGGGTTTTGCCTCGTCCAGG
GTAATCCTTAAAGAGACGAAGGTAGTTATTGTGTTGAATTGTACATGAGC
ACATGCAGAAGAGAAACATAATACAAGAACATGGGGAGAGATCATGATTT
ATTGCTGGTGTGGTTCGATTTGATTATATTGTGTAATTTTGCATAAATGA
GTTTGGCAAGACCAACCAAAGACACCGGCAAACAAATTAAAGGAAAAGAT
ATAACGGATGCAACGAGTAAAGCATCGCATTTTGGCTTTAATTAATACAC
TTCCAACACGTATCACCCACATTAAAGGAAGAACATATTTGATCGTTACC
AAAATGGAAGTTTTGCTATTGTAAATCACAGACAGGACAGTCTAATGGGG
TGATAGATTCGATGGAATATATATATTTTAATATCTTGAGCTCCTATTGT
GCGCAGATTTGTAACTCTGACTAACACGCCCTCATTTTCCTCATGTAATC
CGTTCTTGATTGGGAATGTGTGTAGTCCATATTCATGATCTGTTTTCTTT
GTTTCGGTGGTCTTGCCAACTTTCCCCCCTCATGGATGACGGGCGGTTTC
TGTGGATCTGTGGGTTTCTTCATCAAGTGCCTCCTTGAAACTTGAATATT
TTCGTGTATTTTTTTCACTTTTGTTTTGTGTCTTTTCCTTCCCCGTATCA
TGGAAAACATACGGCTCTTGGATTTCTCTCTGGAGCAGAAGGACCATAAA
CCTGACTCATGGATGAGCCTCCTGAAGGGCATGCGTGCCACCCTGAAGCA
GAAGAAATTCAAGCAGGTCCCACAGCTGTCCACCTCTCGCGAGCTGGACA
TCTCTCAGCCGTTCGCCCTCAGCGGGGTAAGGTGGCAGTCATATGTCGTT
TTTTTTCGGTACTGACGAAGTTGGGTGAGTGTGCACCCAGCATTAGCAAA
AGTCGAGAGATAGGAGCAACCGTACATGTTGACGTGAAAATAGTGTTACT
ACCAAGGTGATCAGTGGAAAATGACCAAATGACGTCCCTTTAACCCTGAA
AGGGTTCAATTGCCTCATGGCGCCGTCACATGGGTTGTGCAGCATACGTA
CTAGAGTATATCCGAGGAAATAAAAGCGTCCAGATATTGAATATCAACTC
AGTTTATGTTGAGGTTCTACCCAGGTGGACATTATATTTTTGAAGATTAC
TCAATCAAGGTGAAAATCTTGGAGCGCAAGATTGTGGAGTGTATTTGAAA
GGATTTTTCCGTGTGGAACGCGTTGGTTTGCGTCCGGGTGCAGGGCACCG
AGGGCAACCACAAGGCACTATTGATCGGTATCAACTACAAGGGCATGGGC
GCCGGCGAGCTGAAGGGCTGCCACAATGACGTAGAGTCGATGAAGGGGTT
CATCCCTGAGCACGTGAGTTGTGTGAAAAAGATGAGAATGGACTCCTACG
TTTAGGTTGGTGCCTGATGCTTTTCCTGCCTTCATCTGTGTTGATGGCTG
CTTTAAAGGTTTTGTGCAGCGTAGTTTCAAGTCTGGTTCCCAAGTGTAAA
GAAACTGGTTTAGATGATGGATGTGAGCGGCTGTGCGTTTTTATAGCACA
GGAACTACTTGAAGCCGTGGTTGTTGCAGTGAGGGTGAGACAGGTCTTGC
GAAGCCTATAGTGGGAACTCTCGCTATTAGGGGGCCGTTGCTTTTCGGAA
AGAGTGTACATGGAGCACACATCGGGGTGTAGCTGGCGTGGCTTCGCACA
ACACTGTAGCGCTCAGTAATCATGTTCTTCACATTAACCTTTCGTTACAA
AAGGTCCACGTCACCCCCAAAAGCTGAAATAACTAATTGAACGCCATTGT
TACCTCATCCATACCGTGTAAATGCTCCAATATCTGCTTATCTGACCTGA
CTAATCTGGAATCAGGGATACCCTACGGAGGAGGGCCCGAACCTGAGGAT
CATCACCGACGATGGCGTCCACGAGGACCCCACCCGTGAGAACATCACCA
ATGGCATGGAGTGAGTTATTTTAAACTGTACATGAGTATATCGTTTCTCA
ACTAATATTCCACCATTTGGAATGGTAGGATGGATATCTTGGGTCATTTG
ACAGTTGGAGCTATTTGTAAACTTTTTTTTTACCTGGGAATTTTGAGGAA
ACTCGAACGTACGCCACCCCCACTTGAGCTTCTATTGTAACGAGTATACT
TCGAACTCGTTGGAACAGGCTAGAACGAAAGTTGCGGAACAGTATGTTGA
ATCGCTAAAATTGATGAGTTGAAAGTTGACTGGTTCAATTCATGATTCCA
TCTAATGACGGGATACAGAGTAAAAAAATGTCAATGAACTGGAAACATTC
CTGGTGTGATGAGAATGTCAGTCAGGGTTTCAATTGATTCTTCTATCAAT
TTCCTCTCATACCAACACTGCTCCTGCTAACTTGTCCACTAGATGGCTCA
TTGCCGGAGCAAAGGCGGGAGACTCCCTCTTCATGCACTACTCGGGTAAG
CGCTGATATCTACTCCTGGGGTTCGCGGAGAGAACGGAGGGCTGGGGTGT
ATATATGTCATATAGCACATGTGGAACCCTTGACCACCCATCAGCTAAGG
ACGGGGGGCGCGTGGCGGTACAATCGAGTTGTTCATGTTCTCGTGAGATT
TCGCAAAAGATGGATTGCAGTCGTCGAATGTGTGCACGTTGAGCGCTCAC
TGATGGCGCGTGGAGTGAAGGAGTTGATATGCAGTGTTGTGACTTCGGTA
TATTTTGAAATATTTACTCGAGAGGTGTGTTTTTGGTTGGTGTAAAGAGT
GCTTGTACCTCGTTGCTTCTTTTTTGTGCCCTGGATCGGCAGGTCACGGG
GGGTCTGTACGCGACCTCAGTGGTGACGAGGAGGACTCCAAGGACGAGAC
AATGGTGCCCTTGGACTACGCCAAGAAGGGCCAGATCAAAGATGACGAGA
TCCTCGAAACGGTAAGCCGACTTTCTCAACGCCAAGCGGAGGGAGTTTAC
CGCAGAGTTAGATACAGCGTTCAAGATAATGTTTCCACTCACCGCAGCTA
TCAGCTCTTGAAAACTCACTGAAGTACTCAACAAATAGGTTGTCATATTG
TCATCTTGGGTTTGAAGCTTGGTCGCGGCTACATGGGCTTTTGAGCATAT
TTGAAAATGTTGGAGGCGAATGGCCGCGCCAAAGACTGAATGAACAAAGC
CTGTCGCCGTTTTAGCGTTGTAGCTGCAGAATCTATGAGTGTGTCGCCGT
CATAACAGCGTCGGAAAAGGCATGTACAATGTTCGACGTCCAACAGTACA
GGCATGATCGGTGTAGGTTGTTCAAGACAGAGACAAATAGCACGTTCCCC
ATCTCAATGAGCTGAGACCACATTTATATTGCTTCCACATAATTGCTCCA
ACAAAACCCTTGAACCCCCTTACTCGAAAAAGTTTGTATCGTTAAAGTGC
GTTCTTGGAGTTATACCCGTCATGATCTGCGTCAAGTCGTGACAAGCAAA
AGCATTACCAAGACTTTAACAGTTCAGGTGATCCGACGAAATGCTCCTCC
AATGTCCTTCCTGCCCCCGCCACCCCTTCTCTCTAACGTTTCCCTGTATG
TGACGGTCGTTTACCTACAGCTCGTGATGCCGCTGGATGCGGGCGTCACC
CTCACCGTGGTGATGGACTGCTGCCACAGCGGATCCATCCTTGACCTGCC
GTACTCGTTCAACGCGAACGACAACGAACTGCAGGCTGTATCCAGCGGCA
GAGGCGTCACAAAGACTCACAAGAAGGGCAACTTCAACATGAGAAAGGTG
TGCATGAGTAATTGTCTGTACTGTTTGGCGTTGGCTATGATTGTAGACGA
ACGTGTAATATTTTGGGGGTCGGGTATACATTCGATTTTGTGGACATTTT
TTGCCAGCAATATGTGGTACCAGTGTGGGTGGGGTATTGTGTGCAAGAGA
TGACTAGGTGTTTTCGGTTGCGTTTTTGTTTCTCGTCGAAACCATATTCT
CCGTCTTCATCCTGTGGAACATGTGTTTGACACATTGGGAGGTCCTGTTC
CTCATGGCCAGCTCAACCACACACCCAGAATCATCCTTGGAAATATCAGA
TGACGGTTCATCAGATGATGGCATTGTCATATGTTGCTATGCCATCCCCC
TTGGCCATGCCGCCGTTGTCGGGTGTTTTTTTTGTAATATTGAGAATCGC
AGCAGACGAAGAATTGGGTGTTCATTATATTTCCAGTAGTTTCTGACGGA
ATCCCCCCCCTCCCTCCCCTTTTTGAAATGTGCTCTTCGTGTTTTGATAA
TTTCAGATGAAAAAGGCGCAGCAGGCGAGGAGGGCGAGGAGGGCAGCGCA
GCAGGCGAAGGAGCACTGAAAGAAGCCATATTTTCCATGTAGCATACGCT
GGGGCACAAATGTGTCCCGAAGCAAAATATTGAAAAGTAGCGGAAATGGT
TACACGGCAGGTCGTGTCGGAAGAGTTTGTTGGTGACGGGCGGTTATAAG
GATAACCTCGGGAGTGTTGGGAGTTTTCGCGGGTCGGTGGTTGAAAGGTA
GATGTATGGTTGACAGACATGGGATTACCCCCCGAACAGCACTTGTCTTG
TCCTGATGGAGGGTGCGATCTACGTGCTTCATCCTTTCTACGTATTGCGT
CCTTGTTCGTAGACTTCTCTGATAAGGTACGGGTCATATTATGTGTTATG
CACTTTCTTAGGCTTGTGTTGGTTTTATTGTTGGGTGATGTGGTTCTTGA
TACTCACCCATTATGGACGGCGATTAAGATGCCATGTCTTTCGGTATACT
GTAACGGCGGTTGTAGCGCTCGTAAATTAAGGCTCCCTTGAACTTTTGTC
ATGTGCGTGCCATTGGGTCGTCGGTACGACACCCTGCAACAGACACAGCA
AGAGTTCTTTTTCATCCGAGGACTGAAGAGATTGCATCAAGCAGGAGTTT
AAACTATTCCTCGGAAAAAATGGAAATTGAGCCCTGTAGGTATATTCCCC
TCGTAAGGGGAGATTGTCTGCTTAGTGCATTAGAGAGCGATGCAGAAACG
ACTTCTTGTGTTACATTGGACACTCAATACACTCGCACGTCCCCCGAAGT
GTGTAATCGATGTTCACGTGGGGGAACCTTTCGACGTTCTCACATCTGCG
TCATGGCTGGCGGTAGTATCTAGAGTAATTATTCAAGACTTGACAAGCCG
TACTTGAGCGTGTCGAATGTGTAACACATGACGCTTTTGTCACGTCCACC
ATCCACACACAGGATTCAAGATGGATCGATAATAGTAACATGTCTGATGG
TATCATTTCGTCTTCTAGTAAAGGTCGAGCAGAAAATCCAGTTCGACCGT
GCAGATTGTGATGACCGAGTTAGACTATTCCTTTCATGGCCGTTCTACTG
CGTTCTATATGTCGGGAAAAGGATAGATATAGAATATTTCAAGCTGGAAT
TTGATCGCGAAATTGCGGCCACATGACAGTGGAAGTATCTCCAATTTGTA
GTACATACGACCGAAGGGTATGGGGTTCTCTCTGCAAGGATATTGAAAGT
TAGGTTAAGGAAAATAATCTTTAAAGTGTTACGTATCATGTGGAAGATAC
ATTTTCACGTGTCATGTTACGTTCTGTCAAGGGGACTCACCACAGGCCCA
CCGGGAAGGAGCGAATTAAAATGGCGTCTCCACCCATCCGAATGGTTACC
GCCTCTTAGTGGCGGATTAGATCAACTCAAGCTGGGTTAACCCCCTAACC
CTAGAC
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig1471:401..11706-

>mRNA_H-paniculata_contig1471.2814.1 ID=mRNA_H-paniculata_contig1471.2814.1|Name=mRNA_H-paniculata_contig1471.2814.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2526bp|location=Sequence derived from alignment at H-paniculata_contig1471:401..11706- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGCATGTTCGGCAACATAAAGGAGCAGGCGCAGGACGCCGTCGAGAT
GAGCATGTTCGGCAACATAAAGGAGCAGGCGCAGGACGCCGTCGAGGAAA
ACGCCGACGCCGTTAAGGTCCAGGTGGAAACTCACATTAGCGAGGCCATG
GGCAGCCTAGGAGTTGGCGGCGGGGAGGGGGGTGCAAGTGCCGAAGGAGA
CATGGCCGGTCAGGTGACGGAAAAGGAAAACGCCGACGCCGTTAAGGTCC
AGGTGGAAACTCACATTAGCGAGGCCATGGGCAGCCTAGGAGTTGGCGGC
GGGGAGGGGGGTGCAAGTGCCGAAGGAGACATGGCCGGTCAGGTGACGGA
AAAGGTCAACGAAACCATTGAGGCAGGCATGAGGGCAGTTGGTGTCAACC
CCACGCATGGGGCACGCGCAGGTGGACATGGCCACGGGAAACATCACCCA
CACGGAAAAAGGGCGGGAGGTAAATGCAGCGCGCACAGAGCCGCCGCGAT
CCCCGACCATGAGTTCAGCGCGGAGGTTGAGGGGGCTATCAAGGCCGATG
TAAGGTCAACGAAACCATTGAGGCAGGCATGAGGGCAGTTGGTGTCAACC
CCACGCATGGGGCACGCGCAGGTGGACATGGCCACGGGAAACATCACCCA
CACGGAAAAAGGGCGGGAGGTAAATGCAGCGCGCACAGAGCCGCCGCGAT
CCCCGACCATGAGTTCAGCGCGGAGGTTGAGGGGGCTATCAAGGCCGATG
TAAGGATGTTCTCCGGATGCCAGGATGAGCAGACCTCGGCGGATGTGCAC
GATGTGGCCAAATTTGGACTCCCCGACGCTTCTGGTGCCGGAGGCGCTTG
CACCAACGCTGTCCTTGTTAACCTGGATGTTCTCCGGATGCCAGGATGAG
CAGACCTCGGCGGATGTGCACGATGTGGCCAAATTTGGACTCCCCGACGC
TTCTGGTGCCGGAGGCGCTTGCACCAACGCTGTCCTTGTTAACCTGAAGG
ACCATAAACCTGACTCATGGATGAGCCTCCTGAAGGGCATGCGTGCCACC
CTGAAGCAGAAGAAATTCAAGCAGGTCCCACAGCTGTCCACCTCTCGCGA
GCTGGACATCTCTCAGCCGTTCGCCCTCAGCGGGAAGGACCATAAACCTG
ACTCATGGATGAGCCTCCTGAAGGGCATGCGTGCCACCCTGAAGCAGAAG
AAATTCAAGCAGGTCCCACAGCTGTCCACCTCTCGCGAGCTGGACATCTC
TCAGCCGTTCGCCCTCAGCGGGGGCACCGAGGGCAACCACAAGGCACTAT
TGATCGGTATCAACTACAAGGGCATGGGCGCCGGCGAGCTGAAGGGCTGC
CACAATGACGTAGAGTCGATGAAGGGGTTCATCCCTGAGCACGGCACCGA
GGGCAACCACAAGGCACTATTGATCGGTATCAACTACAAGGGCATGGGCG
CCGGCGAGCTGAAGGGCTGCCACAATGACGTAGAGTCGATGAAGGGGTTC
ATCCCTGAGCACGGATACCCTACGGAGGAGGGCCCGAACCTGAGGATCAT
CACCGACGATGGCGTCCACGAGGACCCCACCCGTGAGAACATCACCAATG
GCATGGAGGATACCCTACGGAGGAGGGCCCGAACCTGAGGATCATCACCG
ACGATGGCGTCCACGAGGACCCCACCCGTGAGAACATCACCAATGGCATG
GAATGGCTCATTGCCGGAGCAAAGGCGGGAGACTCCCTCTTCATGCACTA
CTCGGATGGCTCATTGCCGGAGCAAAGGCGGGAGACTCCCTCTTCATGCA
CTACTCGGGTCACGGGGGGTCTGTACGCGACCTCAGTGGTGACGAGGAGG
ACTCCAAGGACGAGACAATGGTGCCCTTGGACTACGCCAAGAAGGGCCAG
ATCAAAGATGACGAGATCCTCGAAACGGTCACGGGGGGTCTGTACGCGAC
CTCAGTGGTGACGAGGAGGACTCCAAGGACGAGACAATGGTGCCCTTGGA
CTACGCCAAGAAGGGCCAGATCAAAGATGACGAGATCCTCGAAACGCTCG
TGATGCCGCTGGATGCGGGCGTCACCCTCACCGTGGTGATGGACTGCTGC
CACAGCGGATCCATCCTTGACCTGCCGTACTCGTTCAACGCGAACGACAA
CGAACTGCAGGCTGTATCCAGCGGCAGAGGCGTCACAAAGACTCACAAGA
AGGGCAACTTCAACATGAGAAAGCTCGTGATGCCGCTGGATGCGGGCGTC
ACCCTCACCGTGGTGATGGACTGCTGCCACAGCGGATCCATCCTTGACCT
GCCGTACTCGTTCAACGCGAACGACAACGAACTGCAGGCTGTATCCAGCG
GCAGAGGCGTCACAAAGACTCACAAGAAGGGCAACTTCAACATGAGAAAG
ATGAAAAAGGCGCAGCAGGCGAGGAGGGCGAGGAGGGCAGCGCAGCAGGC
GAAGGAGCACTGAATGAAAAAGGCGCAGCAGGCGAGGAGGGCGAGGAGGG
CAGCGCAGCAGGCGAAGGAGCACTGA
back to top