mRNA_H-paniculata_contig1470.2811.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1470.2811.1
Unique NamemRNA_H-paniculata_contig1470.2811.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig1470.2811.1 vs. uniprot
Match: D7FPV1_ECTSI (Similar to U3 small nucleolar RNA interacting protein 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPV1_ECTSI)

HSP 1 Score: 479 bits (1234), Expect = 2.500e-159
Identity = 390/524 (74.43%), Postives = 428/524 (81.68%), Query Frame = 3
Query:   48 MRPKRSLP-----GPNSGKGSLKKRPHRSGSQQELTSAKRPRQ-VPSALAWGD----AGGAGXXXXXXXXXXXXALSKERKEIEEAREAAELEARETVEEKRLRLARDVLLRLDAEQQGHKEDGTDEEDAEVLEDYIGDRLARARLEATGQLYREVASGLEGKKIPESSVRRMRGHKLTPTCIALSADDTTVYSGSKDNSVVRWDVETGKRVVMLPYWRKLPGGKVPKVKAHKNEVLSLAASSDGRYLVSGGRDRLIKVWDCRTDTVVETFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINAVDSWRKERAVTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKPTVVIPAAHGYSSAGTPRWISAISCMKQSDLVVSGSNDGLVRLWRADVEARSMEQVASVPLEGFINGLAVSSTGKFLVAAVGQEHRLGRWEHLKKARNEICIVQLPS--DNDTVVEMDTDDIGGHEQGDIDGEE 1583
            M PKRS+      G +S  GS + R     S+QE  +AKRPRQ   SALAWGD         XXXXXXXXXXXX                    RET EEKRLRLARDVL++LDAEQ+ ++E+GTDEED +   DYIGDRLA ARLEATGQLYREVA GL+G++I  ++VR MRGHKL+PTC+ LS DDTT +SGSKDNS++RWDVETGKRV MLP+WRKLPGGKVP VKAH  EVL+LA S DGRYL SGGRDRLI VWDCRTDTVVETFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX INA+DSWRKER VT  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  KKKP +++PAAHGYS+ G PRWISAI C+KQSDLVVSGSNDG VRLWRADVEARS+EQVASVPLEGF+NGLAVSSTGKFLVAAVGQEHRLGRWEH KKARNEIC+V LPS  +++  V MDT+     +QGDIDGEE
Sbjct:    1 MPPKRSIGAAGSRGMSSRTGSSRGR----SSRQEPRTAKRPRQQAQSALAWGDDDPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRETAEEKRLRLARDVLMKLDAEQRENREEGTDEEDDDAPGDYIGDRLAHARLEATGQLYREVAKGLQGQQISPTAVRHMRGHKLSPTCVVLSPDDTTAFSGSKDNSIIRWDVETGKRVTMLPHWRKLPGGKVPSVKAHSKEVLTLAVSGDGRYLASGGRDRLINVWDCRTDTVVETFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEINAIDSWRKERLVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMKKKPAMLVPAAHGYSAVGIPRWISAIGCLKQSDLVVSGSNDGSVRLWRADVEARSLEQVASVPLEGFVNGLAVSSTGKFLVAAVGQEHRLGRWEHQKKARNEICVVPLPSGAEDEVAVAMDTESAE-EDQGDIDGEE 519          
BLAST of mRNA_H-paniculata_contig1470.2811.1 vs. uniprot
Match: A0A835Z4V0_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4V0_9STRA)

HSP 1 Score: 273 bits (697), Expect = 3.890e-80
Identity = 212/434 (48.85%), Postives = 269/434 (61.98%), Query Frame = 3
Query:  285 AELEARETVEEKRLRLARDVLLRLDAEQQGHKEDGTDEEDAE-------------------VLEDYIGDRLARARLEATGQLYREVASGLEGKKIPESS-VRRMRGHKLTPTCIALSADDTTVYSGSKDNSVVRWDVETGKRVVMLPYWRKLPGGK--------VPKVKAHKNEVLSLAASSDGRYLVSGGRDRLIKVWDCRTDTVVETFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINAVDSWRKERAVTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKPTVVIPAAHGYSSAGTPRWISAISCMKQSDLVVSGSNDGLVRLWRADVEARSMEQVASVPLEGFINGLAVSSTGKFLVAAVGQEHRLGRWEHLKKARNEICIVQL 1502
            AE E  ET EEKRLRLA++ L +L  E       G+DE+ A                    V ED +  RL R RL A+GQL R +A+ L G  + +++ +R + GH+L  TC+ALS DD T +SGSKDN+V+RWDVETG R V+   W+K P  +            + H  EVL++AAS+DGRY+ +GGRD+L++VWDCRTD VV +F                                                +NA+D++R+ERAV+  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   KKKP  V  AAHG    G   W+ A + ++ SDL V+GS+DG +RLW  D +AR++EQV ++PL GF+NGL+V+STG+F VAAVGQ+HRLGRWE  K ARN +CIV L
Sbjct:   28 AERERAETAEEKRLRLAQEYLAKLGGEL------GSDEDAAAGDXXXXXXXXGEDGVINRGVSEDRLARRLERERLAASGQLQRRLAAALRGADLSDATRIRALSGHRLAVTCVALSGDDATAFSGSKDNAVLRWDVETGARKVLCARWKKRPAAERAAXXXXXXXXEQEHCAEVLAIAASTDGRYVAAGGRDKLVRVWDCRTDEVVASFSGHRDAVTALAFRHGSYSLYSGSADRSIKHWGLSEMAYVETLFGHQGEVNALDAFRRERAVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNLKKKPVAVAAAAHGVGRNGVAPWVCAAAAVRSSDLAVTGSSDGYIRLWHCDTDARTLEQVNAIPLAGFVNGLSVASTGRFAVAAVGQDHRLGRWERQKDARNRVCIVPL 455          
BLAST of mRNA_H-paniculata_contig1470.2811.1 vs. uniprot
Match: A0A6H5KZR0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZR0_9PHAE)

HSP 1 Score: 238 bits (606), Expect = 1.190e-69
Identity = 143/292 (48.97%), Postives = 161/292 (55.14%), Query Frame = 3
Query:  720 EVLSLAASSDGRYLVSGGRDRLIKVWDCRTDTVVETFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--INAVDSWRKERAVTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKPTVVIPAAHGYSSAGTPRWISAISCMKQSDLVVSGSNDGLVRLWRADVEARSMEQVASVPLEGFINGLAVSSTGKFLVAAVGQEHRLGRWEHLKKARNEICIVQLPS--DNDTVVEMDTDDIGGHEQGDIDGEE 1583
            +VL+LA S DGRYL SGGRDRLI VWDCRTDT+VETF                                                  I+ V    ++   TGG                                                    KKKP V++PAAHGYS+ G PRWISAI C+KQSDLVVSGSNDG VRLWRADVEARS+EQVASVPLEGF+NGLAVSSTGKFLVAAVGQEHRLGRWEH KKARNEIC+V LPS  +++  V MDT+     +QGDIDGEE
Sbjct:    6 KVLTLAVSGDGRYLASGGRDRLINVWDCRTDTLVETFRGHQDTVSSLAFRANSLALFSGSHDRCVKVRLWKVLEDSHLVFRPVGGGSIDCVRMLNEDWFTTGGEDGSLALWFAM-----------------------------------------KKKPAVLVPAAHGYSAVGIPRWISAIGCLKQSDLVVSGSNDGSVRLWRADVEARSLEQVASVPLEGFVNGLAVSSTGKFLVAAVGQEHRLGRWEHQKKARNEICVVPLPSGVEDEGAVAMDTESAE-EDQGDIDGEE 255          
BLAST of mRNA_H-paniculata_contig1470.2811.1 vs. uniprot
Match: A0A8K1FMR6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMR6_PYTOL)

HSP 1 Score: 226 bits (575), Expect = 3.150e-62
Identity = 192/420 (45.71%), Postives = 255/420 (60.71%), Query Frame = 3
Query:  291 LEARETVEEKRLRLARDVLLRLDAEQQGHKEDGTDEEDAEVLEDYIGDRLARARLEATGQLYREVASGLEGKKIPESSVRRMRGHKLTPTCIALSADDTTVYSGSKDNSVVRWDVETGKRVVMLPYWRKLPGGKVPKV-KAHKNEVLSLAASSDGRYLVSGGRDRLIKVWDCRTDTVVETFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINAVDSWRKERAVTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKPTVVIPAAHGYSSAGTPRWISAISCMKQSDLVVSGSNDGLVRLWRADVEARSMEQVASVPLEGFINGLAVSSTGKFLVAAVGQEHRLGRWEHLKKARNEICIVQLPSDNDTVVEMDTDDI 1547
            +EARET +EKRLRLA++ L ++  ++    ED T       +E+ +  RL +  LEA G+L+++VAS  E  +    S R ++GHKL  T + LS D  T +S +KD +++RWD+ T  +  +L     LP   + K  K H+  VL+LA +SDG+YL SGG D+L++VWD   + V+ETF XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+N +D+  KER V+ G                                                    +KKP  V+P AHG   AG  RWIS+++ M ++DLV SGS DG +RLWRAD+ AR++E V  +PLEGF+NGL     G+FL+A VGQEHRLGRWE +K  +N + I+ LPS     +E   DD+
Sbjct:   76 MEARETAQEKRLRLAKEYLSKITEQEDDXXEDTTG------VEERVTARLHQDALEAMGKLFKQVASKYEEFEFDTDSTRFLKGHKLPVTALCLSEDGKTAFSAAKDGTILRWDLATQTKTKLL-----LPKDDISKATKDHERCVLALALNSDGKYLASGGYDKLLRVWDAEKNEVIETFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNGLDALYKERVVSCGRDRSVRMWKIPEETQLVFYGNTGSMDCVKMINDEYYVTGGDDGSLSLWFNG-RKKPAYVVPNAHG---AG--RWISSVTVMPRTDLVASGSCDGSIRLWRADLGARTLEPVGEIPLEGFVNGLCFDQKGRFLLAGVGQEHRLGRWERIKHVKNGLAIIALPS-----IEEANDDV 473          
BLAST of mRNA_H-paniculata_contig1470.2811.1 vs. uniprot
Match: D0MYR8_PHYIT (U3 small nucleolar RNA-interacting protein, putative n=9 Tax=Phytophthora TaxID=4783 RepID=D0MYR8_PHYIT)

HSP 1 Score: 202 bits (515), Expect = 5.210e-54
Identity = 166/406 (40.89%), Postives = 228/406 (56.16%), Query Frame = 3
Query:  306 TVEEKRLRLARDVLLRLDAEQQGHKEDGTDEEDAEV--LEDYIGDRLARARLEATGQLYREVASGLEGKKIPESSVRRMRGHKLTPTCIALSADDTTVYSGSKDNSVVRWDVETGKRVVMLPYWRKLPGGKVPKVKAHKNE---VLSLAASSDGRYLVSGGRDRLIKVWDCRTDTVVETFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINAVDSWRKERAVTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKPTVVIPAAHGYSSAGTPRWISAISCMKQSDLVVSGSNDGLVRLWRADVEARSMEQVASVPLEGFINGLAVSSTGKFLVAAVGQEHRLGRWEHLKKARNEICIVQLPS 1508
            T +EKRLRLA++ L ++ A+     E GTD+ED E   +E+ +G RL +  LEA G+L+++VA+     +    S + ++GH+L  T + L  D  T +S +KD S++RWD+   K+  +      LP   V   KA  ++   VL+LAASSDG++L SGGRD+L++VWD     + E+F                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXX+N +DS  KER V+ G                                                    +KKP  VIP AH        +WIS+++ M ++DLV SGS+DG +RLW+AD++ RS+  VAS+PLEGF+N L   +  +FL+A VGQEHRLGRWE LK  +N I I+ LPS
Sbjct:   63 TAQEKRLRLAKEYLGKITAQ-----EAGTDDEDDEGDGVEERVGARLQQDALEAMGKLFKKVAADYSEFEFDADSTKFLKGHRLPVTSLCLLEDGKTAFSAAKDGSLLRWDLAQQKKTKLT-----LPKDDVAAEKATTDKGRCVLALAASSDGKFLASGGRDKLVRVWDVEKGELQESFAGHRDAVSALAFRLRSHSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNGLDSLYKERVVSCGRDRSVRMWKIPEETQLVFYGNSGSMDCVKMVTDEYYVTGGDDGSLSLWFNG-RKKPVCVIPNAHD------GKWISSVAVMPRTDLVASGSSDGQIRLWQADLQGRSLTPVASMPLEGFVNALCFDAKARFLLAGVGQEHRLGRWEKLK-VKNGIAIIALPS 450          
BLAST of mRNA_H-paniculata_contig1470.2811.1 vs. uniprot
Match: A0A662XPF7_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XPF7_9STRA)

HSP 1 Score: 202 bits (515), Expect = 7.450e-54
Identity = 155/404 (38.37%), Postives = 221/404 (54.70%), Query Frame = 3
Query:  312 EEKRLRLARDVLLRLDAEQQGHKEDGTDEE--DAEVLEDYIGDRLARARLEATGQLYREVASGLEGKKIPESSVRRMRGHKLTPTCIALSADDTTVYSGSKDNSVVRWDVETGKRVVMLPYWRKLPGGKVPKVKAHKNE---VLSLAASSDGRYLVSGGRDRLIKVWDCRTDTVVETFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINAVDSWRKERAVTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKPTVVIPAAHGYSSAGTPRWISAISCMKQSDLVVSGSNDGLVRLWRADVEARSMEQVASVPLEGFINGLAVSSTGKFLVAAVGQEHRLGRWEHLKKARNEICIVQLPS 1508
            +EKR+RLA++ L ++ A++ G  +D  +E+  DA  +E+ +G RL +  LEA G+L+++VA+     +    S + ++GH+L  T + L  D  T +S +KD S++RWD+   K+  +      LP   +    A  ++   VL+LA SSDG+YL SGGRD+L+ VWD   + + E+F                    XXXXXXXXXXXXXXXXXXXXXXXXX   +N +DS  KER V+ G                                                    +KKP  VI  AHG       +WIS+++ + ++DLV SGS+DG +RLW+AD+  RS+  VA++PLEG++N L      +FL+A VGQEHRLGRWE LKK +N I IV LPS
Sbjct:   71 QEKRMRLAKEYLTKITAQEAGGTDDEEEEDAADATGVEERVGARLQQDALEAMGKLFKKVAADYAAFEFDTDSTKFLKGHRLPVTSLCLLEDGKTAFSAAKDGSLLRWDLAAQKKTRL-----SLPKDDIAAETATTDKQRCVLALAVSSDGKYLASGGRDKLVHVWDVEKNELQESFSGHRDAISALAFRLRSHSLFXXXXXXXXXXXXXXXXXXXXXXXXXQGEVNGLDSLYKERVVSCGRDRSVRMWKIPEETQLVFYGNSGSMDCVKMVTDEYYVTGGDDGSLSLWFNG-RKKPVCVIANAHG------GKWISSVAVLPRTDLVASGSSDGFIRLWQADLHERSLTPVATIPLEGYVNALCFDLKARFLLAGVGQEHRLGRWEKLKKVKNGIAIVALPS 462          
BLAST of mRNA_H-paniculata_contig1470.2811.1 vs. uniprot
Match: A0A7S3YCM4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YCM4_HETAK)

HSP 1 Score: 199 bits (505), Expect = 1.220e-53
Identity = 136/325 (41.85%), Postives = 192/325 (59.08%), Query Frame = 3
Query:  531 RMRGHKLTPTCIALSADDTTVYSGSKDNSVVRWDVETGKRVVMLPYWRKLPGGKVPKVKAHKNEVLSLAASSDGRYLVSGGRDRLIKVWDCRTDTVVETFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINAVDSWRKERAVTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKPTVVIPAAHGYSSAGTPRWISAISCMKQSDLVVSGSNDGLVRLWRADVEARSMEQVASVPLEGFINGLAVSSTGKFLVAAVGQEHRLGRWEHLKKARNEICIVQLP 1505
            R   H+L+PTC+AL+ DD   ++G KDN++V+W++ETG+R  + P W+   GG     K+H+ E+L++A SSDG+++ +GGRD+L++V+D R+      F                                                I A+D+ R+ER  T G                     XXXXXXXXXXXXXXXXXXXXXXXXXXXX   +K+P   +PA   +   G   W++A+   + SDLV SGS+ GLV+LWRA +E R++E+VA+VPL G+INGLAV+STG+ LVAAVGQEHRLGRW+ ++ A+N + +V+LP
Sbjct:    1 RRGAHRLSPTCVALAEDDRRCWTGGKDNALVQWELETGQRQFLKPMWKHTKGGP----KSHQGEILAVAVSSDGKFVAAGGRDKLVRVYDVRSGREEAAFPGHKDAVSALAFRRGAHALYSGGLDRCLNHWNVDEMGFVETLFGHQSGITALDALRRERCATVGEDATLRLWKLADESQLVFKDHXXXXXXXXXXXXXXXXXXXXXXXXXXXXFALRKRPAAWVPAGQAH---GEGAWVTALGGARDSDLVASGSSTGLVKLWRAGLEDRALEEVAAVPLTGYINGLAVTSTGRVLVAAVGQEHRLGRWDRIQSAKNGLAVVELP 318          
BLAST of mRNA_H-paniculata_contig1470.2811.1 vs. uniprot
Match: A0A5D6XNE3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XNE3_9STRA)

HSP 1 Score: 201 bits (511), Expect = 3.020e-53
Identity = 172/417 (41.25%), Postives = 242/417 (58.03%), Query Frame = 3
Query:  285 AELEARETVEEKRLRLARDVLLRLDAEQQGHKEDGTDEEDAEV--------LEDYIGDRLARARLEATGQLYREVASGLEGKKIPESSVRRMRGHKLTPTCIALSADDTTVYSGSKDNSVVRWDVETGKRVVMLPYWRKLPGGKVPKVKA-HKNEVLSLAASSDGRYLVSGGRDRLIKVWDCRTDTVVETFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINAVDSWRKERAVTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKPTVVIPAAHGYSSAGTPRWISAISCMKQSDLVVSGSNDGLVRLWRADVEARSMEQVASVPLEGFINGLAVSSTGKFLVAAVGQEHRLGRWEHLKKARNEICIVQLPS 1508
            ++ E +ET +EKR+RLA++ L ++ A Q+G   D T +ED +         +E+ +  RL R  LEA G+L+R  A      +    S R + GH+L  T + L+ D  T +S SKD +++RWD+    +  +      LP   V   K  H+  VL+LA SSDG++L SGG D+L++VWD     ++E+F    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ++ +DS  KER V+ G                                                    +KKP  V+P AHG   AG  +W+++++ M ++DLV SGS+DGL+RLW+AD++ R +  VA++P+ G++N L   S  +FL+A VGQEHRLGRWE LK+ +N I I+ LP+
Sbjct:   69 SDAELQETAQEKRVRLAKEYLDKVRA-QEGGANDATSDEDEDADATVFKDGVEEKVSARLQRDALEAMGKLFRAAADSFAEFEFDTDSTRFLPGHRLPVTSVCLADDGKTAFSASKDGAILRWDLAAQTKTRLA-----LPSDDVATAKMDHEKSVLALALSSDGKFLASGGCDKLVRVWDAEKSELLESFKGHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVHGLDSLYKERVVSCGRDRSVRMWKIPEETQLVFYGNSGSMDCVKMVTDEYYVTGGDDGSLSLWFNG-RKKPVHVVPHAHG---AG--KWVASVAVMPRTDLVASGSSDGLIRLWKADLKERKLAPVATIPVPGYVNALVFDSKARFLLAGVGQEHRLGRWERLKRVKNGIAIIALPN 473          
BLAST of mRNA_H-paniculata_contig1470.2811.1 vs. uniprot
Match: W7U1Y2_9STRA (U3 small nucleolar rna-interacting protein 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1Y2_9STRA)

HSP 1 Score: 202 bits (514), Expect = 3.810e-53
Identity = 180/462 (38.96%), Postives = 246/462 (53.25%), Query Frame = 3
Query:  282 AAELEARETVEEKRLRLARDVLLRLDAEQQGHK-EDGTDEEDAEVLEDYIGDRLARARLEATGQLYREVASGLEGKKIPESSVRRMRGHKLTPTCIALSADDTTVYSGSKDNSVVRWDVETGKRVVMLP-YWRKLPGGKVPKVKAHKNEVLSLAASSDGRYLVSGGRDRLIKVWDCRTD--------TVVETFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINAVDSWRKERAVTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------KKKPTVVIPAAHGYSSAGTPRWISAISCMKQSDLVVSGSNDGLVRLWRADV----EARSMEQVASVPL-EGFINGLAVSSTGKFLVAAVGQEHRLGRWEHLKKARNEICIVQLPSDNDTVVEMDTDDIGGHEQGDIDGEE 1583
            A E E  ET  E R+RLA+  L +++A       E+ + +ED +  +D +G  L R RL+A+G L R +A  L            ++GHKL PTC+ ++AD+ T ++G KDN+++R+D+E+G+R   L  +WR   GG+    ++H+ EVL+LA SSDGRYL +GGRD+ I++WD R            V+TF  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             IN +D+WR+ER VT G                                                                 KKKP  V+PAAHG    G  RWIS+++ +K +DLV SGSNDG VRLWRA      +  S+E   +  L  G++NGLA   +G  LVAA G+EHRLGRW   K A N + +++LP +    +  D  D G + + + D +E
Sbjct:   80 AMEEEDDETAAEMRVRLAKQYLAQMEAALGSENDEEESHDEDTDRGKDSMGALLERERLKASGSLRRALAGRLSNFSAATVPTHILKGHKLAPTCVTITADERTAFTGGKDNAILRYDLESGRRTATLSSFWR---GGQ--GYQSHEKEVLALAVSSDGRYLAAGGRDKEIRIWDLRGRGHREGLVLKPVKTFAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMMYVETLFGHQAEINGIDAWRRERPVTCGRDRSVRVWKLADESHMLLQCPQGVGGGGASKGLVMGGSLDCLSMLSEECFVTGGEDGMLAMWNVNKKKPVAVVPAAHG----GNSRWISSVAAIKGTDLVASGSNDGYVRLWRASTTPQGQGSSLESTGAALLCPGYVNGLAFGHSGSVLVAACGKEHRLGRWAPEKGAVNGLYVMRLPDER---MGEDAVDGGANPESESDEDE 529          
BLAST of mRNA_H-paniculata_contig1470.2811.1 vs. uniprot
Match: A0A3M6VTF5_9STRA (ANAPC4_WD40 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VTF5_9STRA)

HSP 1 Score: 200 bits (508), Expect = 5.980e-53
Identity = 163/427 (38.17%), Postives = 234/427 (54.80%), Query Frame = 3
Query:  294 EARETVEEKRLRLARDVLLRLDAEQQGHKEDGTDEEDAEVLEDYIGDRLARARLEATGQLYREVASGLEGKKIPESSVRRMRGHKLTPTCIALSADDTTVYSGSKDNSVVRWDVETGKRVVMLPYWRKLPGGKVPKVKAHKNE---VLSLAASSDGRYLVSGGRDRLIKVWDCRTDTVVETFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINAVDSWRKERAVTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKPTVVIPAAHGYSSAGTPRWISAISCMKQSDLVVSGSNDGLVRLWRADVEARSMEQVASVPLEGFINGLAVSSTGKFLVAAVGQEHRLGRWEHLKKARNEICIVQLP-------SDNDTVVEMDTDD 1544
            E +ET +EKRLRLA+  L ++  ++ G  +D T + D + + + +G RL +  LEA G+L+++VA+     +   +S + ++GH+L  T + L  D  T +S +KD S++RWD+   K+  +      LP   V   KA  ++   VL+LAASSDG++L SGGRD L++VWD   + ++E+F                    XXXXXXXXXXXXXXXXXXXXXXXXXXXX NA+DS  KER V+ G                                                    +KKP  VI  AH        +WIS+++ M ++DLV SGS+DG +RLW+AD++ R++  VAS+P+EGF+N L      +FL+A +GQEHRLGRWE LK  +N I I+ LP        DND   E+++ D
Sbjct:   64 EQKETPQEKRLRLAKVYLDKITTQESGGMDDETADNDDDGVAELVGARLQQDALEAMGKLFKKVAADYVAFEFDTNSTKFLKGHRLPVTSLCLLEDGKTAFSAAKDGSMLRWDLAQQKKTKLT-----LPKNDVGAEKAKTDKDRCVLALAASSDGKFLASGGRDELVRVWDVEKNELLESFSGHRDAVSSLAFRLRSHSLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNALDSLYKERVVSCGRDRSVRVWKIPEETQLVFYGNSGSMDCVKMITDEYYVTGGDDGSLSLWFNG-RKKPVCVISNAHN------GKWISSVAVMPRTDLVASGSSDGQIRLWQADLQGRTLIPVASIPMEGFVNALCFDLKARFLLAGIGQEHRLGRWEKLK-VKNGIAIIALPCVDGEQDKDNDEEEEVNSGD 477          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1470.2811.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPV1_ECTSI2.500e-15974.43Similar to U3 small nucleolar RNA interacting prot... [more]
A0A835Z4V0_9STRA3.890e-8048.85WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A6H5KZR0_9PHAE1.190e-6948.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8K1FMR6_PYTOL3.150e-6245.71Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
D0MYR8_PHYIT5.210e-5440.89U3 small nucleolar RNA-interacting protein, putati... [more]
A0A662XPF7_9STRA7.450e-5438.37Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A7S3YCM4_HETAK1.220e-5341.85Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A5D6XNE3_9STRA3.020e-5341.25Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
W7U1Y2_9STRA3.810e-5338.96U3 small nucleolar rna-interacting protein 2 n=2 T... [more]
A0A3M6VTF5_9STRA5.980e-5338.17ANAPC4_WD40 domain-containing protein n=1 Tax=Pero... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1470contigH-paniculata_contig1470:12919..20371 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score479.2
Seed ortholog evalue2.5e-132
Seed eggNOG ortholog2880.D7FPV1
KEGG koko:K14793
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000151,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005732,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0007154,GO:0007275,GO:0008037,GO:0008150,GO:0008152,GO:0009553,GO:0009790,GO:0009791,GO:0009793,GO:0009856,GO:0009875,GO:0009987,GO:0010154,GO:0010467,GO:0016070,GO:0016072,GO:0022414,GO:0022613,GO:0030515,GO:0030684,GO:0031428,GO:0031461,GO:0031974,GO:0031981,GO:0032040,GO:0032501,GO:0032502,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0044706,GO:0046483,GO:0048229,GO:0048316,GO:0048544,GO:0048608,GO:0048731,GO:0048856,GO:0051704,GO:0060321,GO:0061458,GO:0070013,GO:0071704,GO:0071840,GO:0080008,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1902494,GO:1990234,GO:1990904
EggNOG free text desc.snoRNA binding
EggNOG OGsKOG0299@1,KOG0299@2759
Ec32 ortholog descriptionsimilar to U3 small nucleolar RNA interacting protein 2
Ec32 orthologEc-18_001780.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Exons9
Model size2166
Cds size1545
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929170.6804898-UTR-H-paniculata_contig1470:12918..129651622929170.6804898-UTR-H-paniculata_contig1470:12918..12965Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1470 12919..12965 +
1691480758.8936129-UTR-H-paniculata_contig1470:12918..129651691480758.8936129-UTR-H-paniculata_contig1470:12918..12965Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1470 12919..12965 +
1622929170.8542187-UTR-H-paniculata_contig1470:19797..203711622929170.8542187-UTR-H-paniculata_contig1470:19797..20371Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1470 19798..20371 +
1691480758.9968517-UTR-H-paniculata_contig1470:19797..203711691480758.9968517-UTR-H-paniculata_contig1470:19797..20371Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1470 19798..20371 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929170.6925185-CDS-H-paniculata_contig1470:12965..130791622929170.6925185-CDS-H-paniculata_contig1470:12965..13079Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1470 12966..13079 +
1691480758.903518-CDS-H-paniculata_contig1470:12965..130791691480758.903518-CDS-H-paniculata_contig1470:12965..13079Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1470 12966..13079 +
1622929170.7133036-CDS-H-paniculata_contig1470:14799..150151622929170.7133036-CDS-H-paniculata_contig1470:14799..15015Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1470 14800..15015 +
1691480758.9114957-CDS-H-paniculata_contig1470:14799..150151691480758.9114957-CDS-H-paniculata_contig1470:14799..15015Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1470 14800..15015 +
1622929170.7274647-CDS-H-paniculata_contig1470:15522..156271622929170.7274647-CDS-H-paniculata_contig1470:15522..15627Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1470 15523..15627 +
1691480758.9218287-CDS-H-paniculata_contig1470:15522..156271691480758.9218287-CDS-H-paniculata_contig1470:15522..15627Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1470 15523..15627 +
1622929170.7435021-CDS-H-paniculata_contig1470:16545..167851622929170.7435021-CDS-H-paniculata_contig1470:16545..16785Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1470 16546..16785 +
1691480758.9310892-CDS-H-paniculata_contig1470:16545..167851691480758.9310892-CDS-H-paniculata_contig1470:16545..16785Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1470 16546..16785 +
1622929170.7601438-CDS-H-paniculata_contig1470:17849..180441622929170.7601438-CDS-H-paniculata_contig1470:17849..18044Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1470 17850..18044 +
1691480758.9449344-CDS-H-paniculata_contig1470:17849..180441691480758.9449344-CDS-H-paniculata_contig1470:17849..18044Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1470 17850..18044 +
1622929170.7781255-CDS-H-paniculata_contig1470:18293..184101622929170.7781255-CDS-H-paniculata_contig1470:18293..18410Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1470 18294..18410 +
1691480758.9561796-CDS-H-paniculata_contig1470:18293..184101691480758.9561796-CDS-H-paniculata_contig1470:18293..18410Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1470 18294..18410 +
1622929170.7919052-CDS-H-paniculata_contig1470:18658..187351622929170.7919052-CDS-H-paniculata_contig1470:18658..18735Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1470 18659..18735 +
1691480758.9657-CDS-H-paniculata_contig1470:18658..187351691480758.9657-CDS-H-paniculata_contig1470:18658..18735Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1470 18659..18735 +
1622929170.8104074-CDS-H-paniculata_contig1470:19044..192851622929170.8104074-CDS-H-paniculata_contig1470:19044..19285Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1470 19045..19285 +
1691480758.9751296-CDS-H-paniculata_contig1470:19044..192851691480758.9751296-CDS-H-paniculata_contig1470:19044..19285Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1470 19045..19285 +
1622929170.8270378-CDS-H-paniculata_contig1470:19557..197971622929170.8270378-CDS-H-paniculata_contig1470:19557..19797Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1470 19558..19797 +
1691480758.9853923-CDS-H-paniculata_contig1470:19557..197971691480758.9853923-CDS-H-paniculata_contig1470:19557..19797Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1470 19558..19797 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1470.2811.1prot_H-paniculata_contig1470.2811.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1470 12966..19797 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1470.2811.1

>prot_H-paniculata_contig1470.2811.1 ID=prot_H-paniculata_contig1470.2811.1|Name=mRNA_H-paniculata_contig1470.2811.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=515bp
MRPKRSLPGPNSGKGSLKKRPHRSGSQQELTSAKRPRQVPSALAWGDAGG
AGSESDSEEEEQSEALSKERKEIEEAREAAELEARETVEEKRLRLARDVL
LRLDAEQQGHKEDGTDEEDAEVLEDYIGDRLARARLEATGQLYREVASGL
EGKKIPESSVRRMRGHKLTPTCIALSADDTTVYSGSKDNSVVRWDVETGK
RVVMLPYWRKLPGGKVPKVKAHKNEVLSLAASSDGRYLVSGGRDRLIKVW
DCRTDTVVETFKGHQDSVSSLAFRSSSLDLFSGSHDRCVKHWDLNEMGYV
ETMFGHQSEINAVDSWRKERAVTGGRDRTVRLWKVLEDSHLVFRPVGGGS
IDCLRMLNEDWFVTGGEDGSLSLWFAMKKKPTVVIPAAHGYSSAGTPRWI
SAISCMKQSDLVVSGSNDGLVRLWRADVEARSMEQVASVPLEGFINGLAV
SSTGKFLVAAVGQEHRLGRWEHLKKARNEICIVQLPSDNDTVVEMDTDDI
GGHEQGDIDGEEVE*
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mRNA from alignment at H-paniculata_contig1470:12919..20371+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1470.2811.1 ID=mRNA_H-paniculata_contig1470.2811.1|Name=mRNA_H-paniculata_contig1470.2811.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7453bp|location=Sequence derived from alignment at H-paniculata_contig1470:12919..20371+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAAGGAGGAGAGGACAACTCACGGAGGTGCCACACACCAACACTCAGATG CGTCCTAAACGATCGTTGCCAGGGCCTAATAGCGGAAAAGGATCACTGAA GAAGAGACCTCATAGAAGTGGCTCCCAACAAGAGCTGACGAGCGCCAAAC GTCCACGACAGGCAAGTGGTGTCCATGGGTTTGTTCTACGTGCTGTTCAT GGCCACAGCCTGATGTCAAGTACTATACAGAAATACCTTTCCAGAGGCCT CTCAAGTTGATGGTCATCGAAGGTAAGTTAGCCACGTAGGTCATATGATT TAGGAAGTGGATGCGAGCTCTGGATTGTTGTGCTCAGGGTCTGGGCGTGC CGCTGTCTGGAGTTGAGGTCATGTCGATTTGACATCCGAACCAGTTACAG ACCTCAATTGTCACATTTCGCCGTCTACCACGAAAGTTGAACGTGAGCAG GGAGCTTTATGACATGTTTGTGCATTGTTCACAGCACGAAAGCACCAATG ACGCAAGCACTTTCCAAACGGACTTGCCGGCAAATCGAAGGCGTTCATCA GACCCTATATCGACACGATAGTGCGTGCGTTGTAGGGGTATCTCTCCGTA CTGTACGACATGGATTGCGGAGAATAAATACATAAAATGGATATTTTCGC CCGAGCTTAATCTCTGTAAAGCATACAACTCCACTCGTGTCCCGAACACT GAATGGAAAAGATCTCCCCTCTCTGCAATGTGCATTTGGGGGTCAGTCAC AACAGAGAGGGGGAAATGCCGCGAAAAGATCAACAAATGACCAACGCATC CCCTCTATCTCATTGCTAAAATGAATCAACTCGGGAAACTAGCCTTGGCA AGATTTCGATCTTGGGCGAATTTCGGTTGATACGCCTTTTCTGCACGGCA CCACGAACGATATAATTTACCGTGTCATCCTCTACATGGGGAGGACCCCT TGGAAGCCACCACCACAGACATTACCGCTTTCAAACGTCTGCCGGACCCG ACTTTAGTCTGTCGTGTTCCGCCGACTCCGCGGCCATCCTCGAACGTCTC GGGTAGATGCTTCGTGGACGGGGCTGTTGGCACAGGGCAGATCGTTCCCC TCGATCAGGGTACTGCTGCCCGACGGCAAGTCCCTGTTTGACGTGATGTC CCACCCAGCTCAGCTGCGTGGGGCAGTCCAGTATATCATGGATGCCAGTT CGGTCCCAGGTAAATATCTGTTTCACGTTGTGGTCCCCGAAGGAAGAGAC AATTATCGGCGGATCGCTCGTCGGCGACATTGTTGGTCTACTACCCGACC CCAAGTAGCTGTTCCACATCGGTCACCACGGCTGACAAGGATCGACGGCG ATGATCCTCCCTGCCCCGACAGACCCGTCCACGAAGCACCCGAGACGTTC GGGCACCGTGGCAGGGTGGGAGGTTACCCAGGGTTGAGTTCAGGTGACGC ACATGCCCGGGCCGCCGAGTGCTTGCCGGCGACGGCTGTCTGCCGCCCGG AAGCAGTATAATGTCAGCCTTGGTGATTCCCAAGGAGGTACTTACTCCCC GTGTTAGCGGAGGAGGGTATGGTAAATCATTTTCGTTTGCGTTGCCGTGC TACAAACTAATTCAATCCGAGATCGCATGTAGTCGGCACCTTATCGAGAC TAGTTTTTCCATTTTTTTTGTTAATTAATGCGAGACAAGGAAAGTGCTCC TTATTCTGTCCGCTGTTCCCTAACCGCTAAAATGCTTACTGTCAACGGGG TAAATGTATCTACTCCATTCCCACCTAATAGGAAAGTGAACATGAATGAG AAATATCTCCCAGTTGTTCGCTCTAAATACACAAGTAATTTCCTATATGC AGATGTTTACTCCTATTGGGCTGTTCTGCAGGTTCCGTCCGCCCTCGCGT GGGGAGATGCGGGCGGTGCTGGATCAGAGTCCGACTCGGAAGAGGAGGAG CAAAGTGAAGCCTTGAGTAAGGAACGCAAAGAAATCGAAGAAGCGAGAGA AGCCGCAGAACTTGAGGCGAGGGAAACCGTGGAAGAGAAGCGATTGCGAT TGGCGCGAGATGTGCTTCTCAGACTCGATGCTGAGCAACAGGGACACGTG AGTGTGCGGTGGGCGCTGAGATCTGCTCAACACTGTACACACTTTCGCAA TTAAAAGCCAGATGGACCAGGTGCAAAGTGTTTATACATTAACGTACACT TTGGTTCATCTTGTGTGCCGCTGGCAGGCAATCAGCGGTGTATTTCGTTT GACAATGAAAGCAATCAAATGTTACACAGTAGGGGTACGCAATGCGCGTA CTGGATGATGAATGATATCGTTAGCGATGCTGGCAGGGATGGAGGAGAGT TCATATGTCCTACTATTGGGGGAGCCGGGTGGTATCTATTGTGTTGACGT GCAAAATTGTACCGCGATGTAGAAGGCGTTCTTCGACGAGGACGCTGGAG CATGTACGTAAGGCCTTGAACCTGATTCGTTCGTTCTACATATATTCCAA ATCAATAAATCAATCATGGTATAGCTTTGTGTCGTTTTTCCATGGCGGCC TTCTCAGCCGCTCCTACGGTGTGGTTTATTCTCCGTGCTAATGTTATGAA TCAGAAAGAAGACGGGACGGACGAGGAGGATGCAGAAGTATTGGAGGACT ACATCGGGGACCGGTTAGCTCGCGCTCGTCTCGAAGCGACTGGGCAGCTG TACAGAGAGGTAAAGTGCGTGCTCGCTCAGTTACCGGCGCTTTTTTGCTT TCGAGATAGATCTTGAACAGCGAAAATCCTAAGTAATAATGTTAGTTTCA TGCAGTCATGAATCGATCGCATCCAGTGCGTTACGGTAACTCTAGCAGTC ATGAAAAGAAGTTTGTGTTGCTTTTCAACAGAATATCGCCTCTTTTCATG ACGCTGTTCTTGACTATTGGACAGTACCGCAGATGGATTTCACAAGATAA CACCCCTGGCGATCACTTTTAAAAAGTCGATTTCCTCAAAAAATACGGCG CGAGTAGGGTGTTTTCGTGAACATATGTTTTTAGAGCAATTTTTTATTTA GTCCCGCATGAATCATAGTGAGCTCGCTCTGGGCTACAGGTCTCGGACTC CAGTCTACCTACACAAACATCGCGCTACAAAACGAATTCCTTTTCGAAAC TCGACAGCTCATCGATTTTTCTTACGAATTTTGAGGGGTTCTGAAATTGG CCAAATCGAAATTAAACTGCAGGTACAACTGGTGCCAGTACTCTCTTTCA GTGACGCTGGACGCTGTGTATTGAAGAAAATATATCTGAGATCTTGATAT TGAAAGGCATTATTGCCAATTCAGGACCTTTCCCGCACGAGGAAATTGTC TTTTATTTCTATTTTAATCACACCAGGTGTTATAATGTGAATTTAGTCTA TATTATCATTTGAACGTTGTTTTTTGCATGACTTGACGAGGTTTCAGGTC AGTGTAATAGCGGAGTTTTGCGACAGCTGACGAGGAACGTATTTGTTGCT CCGGAATATAAAGATCAGGGACATACCTTCTCTGTACAAAAGTCAGTTTG CTGCTGGTGCACGCGTACTGCACCTACTGTGTCGTGGTTGTTGGCAAAAT TCGCCCTCCGTGTCGACGCACTTGAAGGTGGCGAGCGGTCTGGAAGGCAA GAAAATACCAGAATCGTCGGTGCGACGCATGCGGGGCCACAAGTTAACGC CGACATGCATCGCACTGTCAGCCGATGACACTACTGTTTACTCAGGGAGC AAGGATAACTCTGTCGTGCGTTGGGACGTTGAGACCGGTAAGCGGGTCGT CATGCTGCCGTACTGGCGTAAGCTCCCTGGAGGAAAGGTGCCCAAGGTCA AGGCCCATAAGAACGAGGTGAGCGTGGGTTCGTTTTTCAGTACATGTTTG GATTCGTTATTTTGCATCAAAGGTAGATTCTTGGATTGTGGCGGACCAGA TACGCGTTGTTGAGATGTTCGATGTCTGATCGCTTCCTGTTTGTCGGTTG GGTATACACAAGATCATCTGGGTCATTGGGACCCGTAACTCTCAGTGCTG AGTAATGGCCCAAAAACGTTTTTTGACTAAAAATAAGGGGGGGGACAAGT GACCGGTATCCCCTATTTTAGACATGTGTGATCACTACGGACGTCATGAC GCATATACAATACGGTTCTTATTCGTGCTGGCGGGCTATATTAAGGCATT ATTTGTGGGAAACGGCAAGCCTATGATCGTGGGTCTAAACGACTACTGTG TTGGCAAATCAAGATCTCGTCGTGTACACAGATATATGCCTGTGCAGCCT TCTGTCCGCTACTTGTGAATAAATCCCATGATAATCAGTACAGCATTACA GTAAGTGCTCAAGTAAGTAGTTATTGATCGTCGCCGATTAGTGCAGGGTG CTGATAAGCTGAGTTTTGATCCATGTGGCCGATGTAGCTTACCTACGGTC GGCTTGCGCACAAGCATTAGCTCATACTCTCAAATGAGTGAAAAAAACGT TTTTAGTCCAAGGGAGGAAGGGGGAGTGCAAGGTTCCGAGAAAAACGCTA CGGTTCCCCTCGCGTGTGTGTGTGTGCTGATGTCTAGTCGTCATTGATGG GCTCCAACTATCGACGGACGCGATCCACATTTTAGCTGTCGTACCACCAG TGTTACTATTAGCACTGACTAAGCGCCGAGAAATATTTGGGCTTCGATAG TTTGCCGCCGAAATGGTGTGAGGGCTGCCACAGATAGAGGGCGGTGCAGT CGATGATTCTGCGACCAGGGGGCATAAAATTAAGGGAAGCTGACGCAAAA TGGCGCTATACCATCCCATTTTTGCCCTCTGGGGGCCCTCCGGGGGAGAC CTCTGGCAGGGTCCGAACCGATCGGAGACTTACTAAATGCTAATTCTCAA TATATTTTCGTTCTCGTGCGACGAATGACAGGTGCTGTCGCTCGCTGCAA GCAGCGATGGACGATACCTAGTGTCGGGTGGGCGAGATCGACTGATCAAA GTTTGGGACTGTCGTACAGACACGGTCGTGGAGACTTTCAAAGGACATCA AGATAGTGTATCCTCGCTGGCTTTCCGATCAAGCAGCCTCGATCTCTTTT CCGGTTCTCATGATCGATGCGTCAAGGTCAGAGCAATGCCGAGACCGTTG ACCATGAGTTGGAAGACAGTCTTGGGTACTCGCGTCGTGTGCTCCGCGGA ATCATTCACCCCTTCTGCTTGTGCAGATCAAAGCAGAGTAGAAAGTGTAC CTACAGTGGAGGTTTTGTACTCTTGATAGCAAGCACCGCTTTTGCTTTCT CTGGTAATATTTACGTACGATATCCCCACGTAAAAGATACCACTGACATT CAATCTTAATCGTGTGTACAAGCAGCACTGGGACTTGAACGAGATGGGCT ATGTGGAAACCATGTTCGGCCACCAGTCAGAGATTAACGCTGTTGACTCA TGGCGGAAGGAACGCGCTGTTACGGGCGGGCGCGACCGCACGGTAAGAGA TGATGAATTTACTTGGGGGCACACGTCCTTTAGCCTGCCAATGAAGCAAG CGATGACAAAATATTGTACGTGATTTGTTCGAGTTAACTTTTCCAGTACC CCTCAAGAGTCCAAAAGCTCGTCCGCGTTAGTAGGATGGTGTCCCGCGCA ACTCTTCGAGATTACTTCTACCGTATAACTGTCCCTACTTACCCCTCTTG TGCTTGGCTGTTGTGCGTGTCATCTGCGGATATGATCCAGGTACGACTTT GGAAGGTTCTAGAGGACAGTCATCTCGTGTTTCGGCCTGTGGGAGGCGGC AGTATCGACTGCCTCAGGTATGACTGCTTGCGACAATGCTTTATACATAC TCCATGCGTACCTCCTACCTTGGAAGACTGTCGGTCTGTTGTGAACCAAG CACCGCGTGAAACACGGCGTTGTGTTATGTTCGGATACCTCTCAAATACA ACATGTAACACCGGTGTGATGCTGTAGATATCGGATATTGGTGCACCCTA GTCAGTAGTATCAGTGCTTCGCCGCCTTTGAAAGACGTAGTGGGTCGATA GTCCAAACCCATTAGTACACCATGAGGTGCTATCTTTTTCATATTCCGTT GCTTCTCTTGTGACTTCGGTTCACAGGATGCTAAACGAGGACTGGTTTGT AACGGGTGGCGAAGATGGAAGTCTTTCGCTGTGGTTCGCCATGAAGAAGA AGCCAACCGTCGTAATACCTGCTGCTCATGGTTATAGTTCTGCGGGTACG CCAAGGTGGATCAGTGCTATTTCATGCATGAAACAATCTGACCTAGTTGT CAGCGGGTCCAACGACGGATTGGTGCGGTTGTGGCGTGCTGACGTTGAGG CCCGATCAATGGAGCAAGTGAGTGATGATCCCGCCGCAAGGCTGGCCTCG CTTTGCGAGAAGGGTAATCCACCGTCTTCGGTGTCCTCCTTCGTGCTTGT AGTACATTAAGAAATGGAATTTGTTTTGAAAAAAATACGCGAGGCATTGA GTCGTTGTTTCGAGCATGAAACAATCGATATGTTGATCAATATTTTGTGC GAACGCCGGCCAGGATTTTCTCCGCAACATCAATGTCGACAAAGAGGTGA ACATGTGTTGTTTTTCGTTTTTGCCCCCGCGTTTCGCAGGTGGCCTCTGT GCCTTTAGAAGGATTCATCAACGGACTGGCCGTGTCCTCCACTGGGAAAT TTCTTGTGGCAGCTGTAGGACAGGAGCATCGACTAGGTCGGTGGGAGCAT CTGAAGAAGGCTCGCAACGAAATTTGCATAGTGCAACTTCCATCTGACAA CGATACCGTAGTCGAGATGGACACTGACGATATTGGTGGTCACGAGCAAG GGGATATCGATGGAGAGGAAGTTGAATAATAGACGCGGGGATTTCTTGTG CCTCTTGCATTGTACGCGGATGTTGGCAATATAAACAGTGTCTGAGAACA CGATGCTCCCATCCTCTCAAGGGACACCGCCTGCACTGCGGGTTGGTTTT AAATCTTGCAATGTAGTGCGGAGTACGCACTTGTATTTTTTTCTGTTAGA GATGAGCTGGCCAGGTCGGTCACAGCTCGAAAAGCTGTTCTGAGAATGGA ACATGGTGTCATTGGGTATTGTCTAGGCGGCTGGGGTTTAGAAAGTCCAG GGAAGTGAGGAACGTGTTCTCCACCTGACGACTGCATTACAGTTATAGGA GAAACTTACCGCCATCCACCGTGTCGCACAGTGTACCAGCAACACTTGGG TCCGCTTTGACCTATTGCGTCCAACATGAATTGATGTTCCGTAGAAACTT GACACGATACCACTGTTCATCGCCACGTGTTGTTGAGCAAACTAGCAGCG CTGTACCACGACTGTGATTGCGCACCGCGCGGTTCAATATGGGCGTCGAG TAAAGGAAAACGTGCGTTTTCTTTCCATCGATATCTTAAAAGAGACCCAA AAC
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Coding sequence (CDS) from alignment at H-paniculata_contig1470:12919..20371+

>mRNA_H-paniculata_contig1470.2811.1 ID=mRNA_H-paniculata_contig1470.2811.1|Name=mRNA_H-paniculata_contig1470.2811.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3090bp|location=Sequence derived from alignment at H-paniculata_contig1470:12919..20371+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGTCCTAAACGATCGTTGCCAGGGCCTAATAGCGGAAAAGGATCACT
GAAGAAGAGACCTCATAGAAGTGGCTCCCAACAAGAGCTGACGAGCGCCA
AACGTCCACGACAGATGCGTCCTAAACGATCGTTGCCAGGGCCTAATAGC
GGAAAAGGATCACTGAAGAAGAGACCTCATAGAAGTGGCTCCCAACAAGA
GCTGACGAGCGCCAAACGTCCACGACAGGTTCCGTCCGCCCTCGCGTGGG
GAGATGCGGGCGGTGCTGGATCAGAGTCCGACTCGGAAGAGGAGGAGCAA
AGTGAAGCCTTGAGTAAGGAACGCAAAGAAATCGAAGAAGCGAGAGAAGC
CGCAGAACTTGAGGCGAGGGAAACCGTGGAAGAGAAGCGATTGCGATTGG
CGCGAGATGTGCTTCTCAGACTCGATGCTGAGCAACAGGGACACGTTCCG
TCCGCCCTCGCGTGGGGAGATGCGGGCGGTGCTGGATCAGAGTCCGACTC
GGAAGAGGAGGAGCAAAGTGAAGCCTTGAGTAAGGAACGCAAAGAAATCG
AAGAAGCGAGAGAAGCCGCAGAACTTGAGGCGAGGGAAACCGTGGAAGAG
AAGCGATTGCGATTGGCGCGAGATGTGCTTCTCAGACTCGATGCTGAGCA
ACAGGGACACAAAGAAGACGGGACGGACGAGGAGGATGCAGAAGTATTGG
AGGACTACATCGGGGACCGGTTAGCTCGCGCTCGTCTCGAAGCGACTGGG
CAGCTGTACAGAGAGAAAGAAGACGGGACGGACGAGGAGGATGCAGAAGT
ATTGGAGGACTACATCGGGGACCGGTTAGCTCGCGCTCGTCTCGAAGCGA
CTGGGCAGCTGTACAGAGAGGTGGCGAGCGGTCTGGAAGGCAAGAAAATA
CCAGAATCGTCGGTGCGACGCATGCGGGGCCACAAGTTAACGCCGACATG
CATCGCACTGTCAGCCGATGACACTACTGTTTACTCAGGGAGCAAGGATA
ACTCTGTCGTGCGTTGGGACGTTGAGACCGGTAAGCGGGTCGTCATGCTG
CCGTACTGGCGTAAGCTCCCTGGAGGAAAGGTGCCCAAGGTCAAGGCCCA
TAAGAACGAGGTGGCGAGCGGTCTGGAAGGCAAGAAAATACCAGAATCGT
CGGTGCGACGCATGCGGGGCCACAAGTTAACGCCGACATGCATCGCACTG
TCAGCCGATGACACTACTGTTTACTCAGGGAGCAAGGATAACTCTGTCGT
GCGTTGGGACGTTGAGACCGGTAAGCGGGTCGTCATGCTGCCGTACTGGC
GTAAGCTCCCTGGAGGAAAGGTGCCCAAGGTCAAGGCCCATAAGAACGAG
GTGCTGTCGCTCGCTGCAAGCAGCGATGGACGATACCTAGTGTCGGGTGG
GCGAGATCGACTGATCAAAGTTTGGGACTGTCGTACAGACACGGTCGTGG
AGACTTTCAAAGGACATCAAGATAGTGTATCCTCGCTGGCTTTCCGATCA
AGCAGCCTCGATCTCTTTTCCGGTTCTCATGATCGATGCGTCAAGGTGCT
GTCGCTCGCTGCAAGCAGCGATGGACGATACCTAGTGTCGGGTGGGCGAG
ATCGACTGATCAAAGTTTGGGACTGTCGTACAGACACGGTCGTGGAGACT
TTCAAAGGACATCAAGATAGTGTATCCTCGCTGGCTTTCCGATCAAGCAG
CCTCGATCTCTTTTCCGGTTCTCATGATCGATGCGTCAAGCACTGGGACT
TGAACGAGATGGGCTATGTGGAAACCATGTTCGGCCACCAGTCAGAGATT
AACGCTGTTGACTCATGGCGGAAGGAACGCGCTGTTACGGGCGGGCGCGA
CCGCACGCACTGGGACTTGAACGAGATGGGCTATGTGGAAACCATGTTCG
GCCACCAGTCAGAGATTAACGCTGTTGACTCATGGCGGAAGGAACGCGCT
GTTACGGGCGGGCGCGACCGCACGGTACGACTTTGGAAGGTTCTAGAGGA
CAGTCATCTCGTGTTTCGGCCTGTGGGAGGCGGCAGTATCGACTGCCTCA
GGTACGACTTTGGAAGGTTCTAGAGGACAGTCATCTCGTGTTTCGGCCTG
TGGGAGGCGGCAGTATCGACTGCCTCAGGATGCTAAACGAGGACTGGTTT
GTAACGGGTGGCGAAGATGGAAGTCTTTCGCTGTGGTTCGCCATGAAGAA
GAAGCCAACCGTCGTAATACCTGCTGCTCATGGTTATAGTTCTGCGGGTA
CGCCAAGGTGGATCAGTGCTATTTCATGCATGAAACAATCTGACCTAGTT
GTCAGCGGGTCCAACGACGGATTGGTGCGGTTGTGGCGTGCTGACGTTGA
GGCCCGATCAATGGAGCAAGATGCTAAACGAGGACTGGTTTGTAACGGGT
GGCGAAGATGGAAGTCTTTCGCTGTGGTTCGCCATGAAGAAGAAGCCAAC
CGTCGTAATACCTGCTGCTCATGGTTATAGTTCTGCGGGTACGCCAAGGT
GGATCAGTGCTATTTCATGCATGAAACAATCTGACCTAGTTGTCAGCGGG
TCCAACGACGGATTGGTGCGGTTGTGGCGTGCTGACGTTGAGGCCCGATC
AATGGAGCAAGTGGCCTCTGTGCCTTTAGAAGGATTCATCAACGGACTGG
CCGTGTCCTCCACTGGGAAATTTCTTGTGGCAGCTGTAGGACAGGAGCAT
CGACTAGGTCGGTGGGAGCATCTGAAGAAGGCTCGCAACGAAATTTGCAT
AGTGCAACTTCCATCTGACAACGATACCGTAGTCGAGATGGACACTGACG
ATATTGGTGGTCACGAGCAAGGGGATATCGATGGAGAGGAAGTTGAATAA
GTGGCCTCTGTGCCTTTAGAAGGATTCATCAACGGACTGGCCGTGTCCTC
CACTGGGAAATTTCTTGTGGCAGCTGTAGGACAGGAGCATCGACTAGGTC
GGTGGGAGCATCTGAAGAAGGCTCGCAACGAAATTTGCATAGTGCAACTT
CCATCTGACAACGATACCGTAGTCGAGATGGACACTGACGATATTGGTGG
TCACGAGCAAGGGGATATCGATGGAGAGGAAGTTGAATAA
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