prot_H-paniculata_contig147.2808.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig147.2808.1
Unique Nameprot_H-paniculata_contig147.2808.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length224
Homology
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BLAST of mRNA_H-paniculata_contig147.2808.1 vs. uniprot
Match: D7FQ77_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ77_ECTSI)

HSP 1 Score: 199 bits (506), Expect = 2.270e-61
Identity = 94/142 (66.20%), Postives = 117/142 (82.39%), Query Frame = 0 
Query:   42 PLLPVDFGLWKLAPPVLGLLGLGVYAGYRKQMHSDAVEAQALRQPGAH-VPINAYRVATRALMYGSVLSIGCTSAGVLAVGYFMGVRNVQEFSDKMRAWAPQQMHKLGFRHTPDYIRDRKATRTMTPDEEWEYIGSLMNKDE 182
            PL+PVDFG WKLAP  LGLLGLGVYAG+RKQ+ +DAV A+AL + G   +P + +R+ATRALMYG+ LS+GC SAGVL VGY MGV N++EF+DKM+ WAP+QMH+LGFRH P+YIRDR+A R MT DEEWEY+  L+ K+E
Sbjct:   29 PLIPVDFGYWKLAPAGLGLLGLGVYAGFRKQIKADAVGAEALAKQGLEPLPFSPHRLATRALMYGTALSVGCFSAGVLVVGYSMGVTNLREFNDKMKVWAPEQMHRLGFRHRPEYIRDREAMRGMTYDEEWEYVDRLLEKEE 170
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BLAST of mRNA_H-paniculata_contig147.2808.1 vs. uniprot
Match: K8Z7I1_NANGC (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z7I1_NANGC)

HSP 1 Score: 57.8 bits (138), Expect = 1.010e-6
Identity = 40/130 (30.77%), Postives = 60/130 (46.15%), Query Frame = 0 
Query:   58 LGLLGLGVYAG-YRKQMHSDAVEAQALRQPGA---------HVPINAYRVATRALMYGSVLSIGCTSAGVLAVGYFMGVRNVQEFSDKMRAWAPQQMHKLG----FRHTPDYIRDRKATRTMTPDEEWEY 173
            LG++G GV AG YR    ++ +E      P           H   N  R A +AL  G+VL +  T      VG  MGV  V+EF+ K++ WAP +  +L      +      R+R+    M+ +EE +Y
Sbjct:   57 LGIVGCGVAAGLYRANRDTEGMEEWRKLPPSQQVKHWKRDPHAEFNPTRFAGKALAVGTVLCLSATGTLAFVVGRAMGVGTVEEFTQKLKVWAPAKRRELEAWLKIKPNASLERERERLAAMSYEEEIDY 186
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig147.2808.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQ77_ECTSI2.270e-6166.20Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
K8Z7I1_NANGC1.010e-630.77Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 178..223
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 125..223
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 70..100
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..69
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 101..124
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..49
NoneNo IPR availableTMHMMTMhelixcoord: 104..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig147contigH-paniculata_contig147:28823..32720 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig147.2808.1mRNA_H-paniculata_contig147.2808.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig147 28790..32929 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig147.2808.1 ID=prot_H-paniculata_contig147.2808.1|Name=mRNA_H-paniculata_contig147.2808.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=224bp
MEQRIESRSNPPPRDGSLSSRSSSTTMNTDDINGSSGAEFNPLLPVDFGL
WKLAPPVLGLLGLGVYAGYRKQMHSDAVEAQALRQPGAHVPINAYRVATR
ALMYGSVLSIGCTSAGVLAVGYFMGVRNVQEFSDKMRAWAPQQMHKLGFR
HTPDYIRDRKATRTMTPDEEWEYIGSLMNKDEARAARENEEADREREEQR
IIRAREKRHMERIEEAARRRQQQ*
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