prot_H-paniculata_contig147.2804.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig147.2804.1
Unique Nameprot_H-paniculata_contig147.2804.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length256
Homology
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BLAST of mRNA_H-paniculata_contig147.2804.1 vs. uniprot
Match: D7FQ74_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ74_ECTSI)

HSP 1 Score: 159 bits (401), Expect = 6.530e-45
Identity = 76/95 (80.00%), Postives = 85/95 (89.47%), Query Frame = 0 
Query:  161 KDGSVTNIAQAFSDKLYVTVDGQGTPASDSRELPYELNVEVSCAWLHVLGRKIPLNFIKGKGTTFVVYNDPKLRVFRSDTGGLVVQTKAEETVPV 255
            +DGSVTNIAQA  DKLYVTVDGQG+PAS   +LPYE+NVEVS AWLH LG KIPL+FIKGKGTTFVVYND +LR+FRSDTGG+VVQTKA+E VPV
Sbjct:  108 EDGSVTNIAQALGDKLYVTVDGQGSPASTDTDLPYEVNVEVSRAWLHALGGKIPLDFIKGKGTTFVVYNDARLRIFRSDTGGVVVQTKADEVVPV 202
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig147.2804.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQ74_ECTSI6.530e-4580.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..255
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig147contigH-paniculata_contig147:19920..22909 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig147.2804.1mRNA_H-paniculata_contig147.2804.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig147 19736..23614 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig147.2804.1 ID=prot_H-paniculata_contig147.2804.1|Name=mRNA_H-paniculata_contig147.2804.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=256bp
MTSSFLRVDTAFLLVACVLGFGLQATVAFCPSQQLLLQSVRPADDMRARL
TTTVPSSRNGMAMGFSFTLPTFGKPKQVTKTITNVWSEELLSLLSDKSRK
INDADVMEKIERLEAAGVTFNEDYLYDGPWRVLWKTNTSWQRYFDPFNGV
ADNRAYQWYEKDGSVTNIAQAFSDKLYVTVDGQGTPASDSRELPYELNVE
VSCAWLHVLGRKIPLNFIKGKGTTFVVYNDPKLRVFRSDTGGLVVQTKAE
ETVPV*
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