prot_H-paniculata_contig14699.2802.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14699.2802.1
Unique Nameprot_H-paniculata_contig14699.2802.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length164
Homology
BLAST of mRNA_H-paniculata_contig14699.2802.1 vs. uniprot
Match: D7FRY5_ECTSI (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRY5_ECTSI)

HSP 1 Score: 239 bits (610), Expect = 2.090e-72
Identity = 128/164 (78.05%), Postives = 143/164 (87.20%), Query Frame = 0
Query:    1 MVVSLEDLQNPMALYQTLGFKTAVGMPFKDIATADSVFLPEVPPVDDKAARTALRRMQEAGVGVMAPLAALEAAPVPNAVAVVSLEEAAQSGGQVNLPEGAIRLAVSIKGTEEDLSPLSTISPAPIMGLINVPEGVSRVHASRRVFQHLADTNSDLAIIHHALF 164
            M +S+EDLQNP ALYQ LGFKTAVGMPFKDIAT DSV+L +VP  DDK ART+LRRMQEAGVGV+APLAALEA P+ NAVAVVSLE+ A+SGGQVNLPEGAIRLAV I+GTE DLS LS ISP P++GL+NVP GVSRVHASRRVFQHLAD  +DLA+IH A F
Sbjct:  365 MPISVEDLQNPQALYQVLGFKTAVGMPFKDIATTDSVYLEQVPATDDKKARTSLRRMQEAGVGVLAPLAALEANPIANAVAVVSLEDVAKSGGQVNLPEGAIRLAVEIEGTE-DLSVLSNISPKPMVGLLNVPAGVSRVHASRRVFQHLADAKNDLAVIHLASF 527          
BLAST of mRNA_H-paniculata_contig14699.2802.1 vs. uniprot
Match: A0A6H5KI66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI66_9PHAE)

HSP 1 Score: 202 bits (513), Expect = 6.930e-62
Identity = 109/139 (78.42%), Postives = 121/139 (87.05%), Query Frame = 0
Query:   26 MPFKDIATADSVFLPEVPPVDDKAARTALRRMQEAGVGVMAPLAALEAAPVPNAVAVVSLEEAAQSGGQVNLPEGAIRLAVSIKGTEEDLSPLSTISPAPIMGLINVPEGVSRVHASRRVFQHLADTNSDLAIIHHALF 164
            MPFKDIAT DSV+L +VP  DDK ART+LRRMQEAGVGV+APLAALEA P+ NAVAVVSLE+ A+SGGQVNLP+GAIRLAV IKGTE DLS LS ISP P++GL+NVP GVSRVHASRRVFQHLAD  +DLAIIHH  F
Sbjct:    1 MPFKDIATTDSVYLEQVPAADDKNARTSLRRMQEAGVGVLAPLAALEANPIANAVAVVSLEDVAKSGGQVNLPKGAIRLAVEIKGTE-DLSVLSNISPKPMVGLLNVPAGVSRVHASRRVFQHLADAKNDLAIIHHVSF 138          
BLAST of mRNA_H-paniculata_contig14699.2802.1 vs. uniprot
Match: A0A835YGL0_9STRA (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase chloroplast n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGL0_9STRA)

HSP 1 Score: 186 bits (472), Expect = 2.190e-52
Identity = 98/161 (60.87%), Postives = 127/161 (78.88%), Query Frame = 0
Query:    3 VSLEDLQNPMALYQTLGFKTAVGMPFKDIATADSVFLPEVPPVDDKAARTALRRMQEAGVGVMAPLAALEAAPVPNAVAVVSLEEAAQSGGQVNLPEGAIRLAVSIKGTEED--LSPLSTISPAPIMGLINVPEGVSRVHASRRVFQHLADTNSDLAIIHH 161
            V+L+DL  P  LY+ LG K AVGMPFKDIAT DS+FL EVPP DD+ ARTALRR+QE GVGV+AP+ AL+A+P+PN++AVVSLE+ A +GG+V LPEG +R  +++KGTE D  L+ L T  PA +  L+  P GVSR+HA+RRVFQ L+DT+S L++IHH
Sbjct:  365 VTLKDLAQPDLLYRRLGCKLAVGMPFKDIATVDSIFLREVPPADDRQARTALRRLQEVGVGVLAPIEALKASPLPNSLAVVSLEDWAAAGGKVELPEGVLRAVLTVKGTESDDALAMLGTGCPA-VFALLETPAGVSRIHAARRVFQALSDTSSTLSVIHH 524          
BLAST of mRNA_H-paniculata_contig14699.2802.1 vs. uniprot
Match: A0A7S3UZY5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UZY5_HETAK)

HSP 1 Score: 177 bits (448), Expect = 7.340e-49
Identity = 100/164 (60.98%), Postives = 122/164 (74.39%), Query Frame = 0
Query:    3 VSLEDLQNPMALYQTLGFKTAVGMPFKDIATADSVFLPEVPPVDDKAARTALRRMQEAGVGVMAPLAALEAAPVPNAVAVVSLEEAAQSGGQVNLPEGAIRLAVSIKGTEEDLS--PLSTISPAPIMGLINVPEGVSRVHASRRVFQHLADTNSDLAIIHHALF 164
            V++  LQ P  LY+ LG KTAVGMPFKDIAT+DS++L EVP  DD AART LRR+QEAGVGV+AP AAL AAPVPNAVAVVSLEEAAQ  G V LPEGA R AV++ G E+D +   L  ++  P M L+ VP  VSR+HA+RRVF+ L  T +++ +IHH  F
Sbjct:  399 VTVAQLQQPDQLYRDLGCKTAVGMPFKDIATSDSLYLAEVPAADDAAARTTLRRLQEAGVGVVAPAAALAAAPVPNAVAVVSLEEAAQ--GPVALPEGAARWAVAVTGVEDDAAFGVLKALADPPAMALLKVPGDVSRLHAARRVFEQLHRTQNNVPVIHHLAF 560          
BLAST of mRNA_H-paniculata_contig14699.2802.1 vs. uniprot
Match: A0A7S0TXQ2_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TXQ2_HEMAN)

HSP 1 Score: 159 bits (403), Expect = 2.900e-43
Identity = 89/160 (55.62%), Postives = 113/160 (70.62%), Query Frame = 0
Query:    2 VVSLEDLQNPMALYQTLGFKTAVGMPFKDIATADSVFLPEVPPVDDKAARTALRRMQEAGVGVMAPLAALEAAPVPNAVAVVSLEEAAQSGGQVNLPEGAIRLAVSIKGTEEDLSPLSTISPAPIMGLINVPEGVSRVHASRRVFQHLADTNSDLAIIHH 161
            VV+ E L +P ALY  LG KTAVGMPFKD+AT+DS+ +      DDKAARTALRRMQE G+GV++  A LEA+P+ NA+A+ SLEEAA+S   V LP+GAIR A+++ G EED          P++ ++ VPEGVSRVHASRRVF+ L     D  +IHH
Sbjct:  219 VVTPESLSSPDALYYDLGCKTAVGMPFKDLATSDSILVTGTVAADDKAARTALRRMQEVGIGVISDAADLEASPIANAIALYSLEEAAKSS--VKLPKGAIRYAITVSGNEEDAVLDKLKGMDPLLLMLKVPEGVSRVHASRRVFESLKKAGLDAPVIHH 376          
BLAST of mRNA_H-paniculata_contig14699.2802.1 vs. uniprot
Match: A0A7S0VYW6_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VYW6_9CRYP)

HSP 1 Score: 159 bits (403), Expect = 1.490e-42
Identity = 88/160 (55.00%), Postives = 111/160 (69.38%), Query Frame = 0
Query:    2 VVSLEDLQNPMALYQTLGFKTAVGMPFKDIATADSVFLPEVPPVDDKAARTALRRMQEAGVGVMAPLAALEAAPVPNAVAVVSLEEAAQSGGQVNLPEGAIRLAVSIKGTEEDLSPLSTISPAPIMGLINVPEGVSRVHASRRVFQHLADTNSDLAIIHH 161
            VV  E L +P ALY  LG KTAVGMPFKD+AT+DS+ L    P  DKAARTALRRMQE G+GV++P A L+ +P+ NA+A+  L EAA+SG    LPEGAIR AV++ G E D       S  P++ ++ VP+GVSRVHASRRVF+HL     +  +IHH
Sbjct:  397 VVPPEALSSPDALYHDLGCKTAVGMPFKDLATSDSILLTGPVPASDKAARTALRRMQEVGIGVISPAAVLKESPIDNAIALFDLSEAAESGA--GLPEGAIRAAVTVTGAEGDQELAELKSLDPLLIMLKVPDGVSRVHASRRVFEHLKKEGLETPVIHH 554          
BLAST of mRNA_H-paniculata_contig14699.2802.1 vs. uniprot
Match: A0A6U4N756_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4N756_HEMAN)

HSP 1 Score: 159 bits (403), Expect = 1.560e-42
Identity = 89/160 (55.62%), Postives = 113/160 (70.62%), Query Frame = 0
Query:    2 VVSLEDLQNPMALYQTLGFKTAVGMPFKDIATADSVFLPEVPPVDDKAARTALRRMQEAGVGVMAPLAALEAAPVPNAVAVVSLEEAAQSGGQVNLPEGAIRLAVSIKGTEEDLSPLSTISPAPIMGLINVPEGVSRVHASRRVFQHLADTNSDLAIIHH 161
            VV+ E L +P ALY  LG KTAVGMPFKD+AT+DS+ +      DDKAARTALRRMQE G+GV++  A LEA+P+ NA+A+ SLEEAA+S   V LP+GAIR A+++ G EED          P++ ++ VPEGVSRVHASRRVF+ L     D  +IHH
Sbjct:  397 VVTPESLSSPDALYYDLGCKTAVGMPFKDLATSDSILVTGTVAADDKAARTALRRMQEVGIGVISDAADLEASPIANAIALYSLEEAAKSS--VKLPKGAIRYAITVSGNEEDAVLDKLKGMDPLLLMLKVPEGVSRVHASRRVFESLKKAGLDAPVIHH 554          
BLAST of mRNA_H-paniculata_contig14699.2802.1 vs. uniprot
Match: A0A2V0NPD0_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NPD0_9CHLO)

HSP 1 Score: 151 bits (381), Expect = 4.780e-41
Identity = 88/159 (55.35%), Postives = 110/159 (69.18%), Query Frame = 0
Query:    8 LQNPMALYQTLGFKTAVGMPFKDIATADSVFLPEVPPVDDKAARTALRRMQEAGVGVMAPLAALEAAPVPNAVAVVSLEEAAQSGGQVNLPEGAIRLAVSIKGTEED--LSPLSTISPAPIMGLINVPEGVSRVHASRRVFQHLADTNSDLAIIHHALF 164
            L +P ALY+ LG K  VGMPFKDIAT+D++F+ E+PP  DK AR ALRR+QE GV V++P AAL A+P+P AVA+V L EAA       LPEGA RLA+ I GTE D  L+   T+  A  + L+NV +GVSRVHASRRVF+ L    S L ++HH  F
Sbjct:   85 LSSPEALYRKLGAKLVVGMPFKDIATSDAIFMRELPPAGDKDARRALRRLQEIGVHVISPAAALAASPLPGAVALVPLREAAAGA---ELPEGAARLALEIDGTETDAQLAAAGTLGAA--VALLNVADGVSRVHASRRVFEALKSAGSGLPVVHHVRF 238          
BLAST of mRNA_H-paniculata_contig14699.2802.1 vs. uniprot
Match: L1K0P1_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1K0P1_GUITC)

HSP 1 Score: 153 bits (386), Expect = 2.710e-40
Identity = 83/162 (51.23%), Postives = 109/162 (67.28%), Query Frame = 0
Query:    3 VSLEDLQNPMALYQTLGFKTAVGMPFKDIATADSVFLPEVPPVDDKAARTALRRMQEAGVGVMAPLAALEAAPVPNAVAVVSLEEAAQSGGQVNLPEGAIRLAVSIKGTEEDLSPLSTISPAPIMGLINVPEGVSRVHASRRVFQHLADTNSDLAIIHHALF 164
            VSLEDL +P  LY  LG KTAVGMPFKD+AT+DS+ L + P +D    RTALRR+QE GVGV+ P   L+A P+PNA+AV  L++    G +  LP+GAIR A++++G E D       S   +M L+ VP+ VSRVHASRRVF  L + + D  +IHH +F
Sbjct:  355 VSLEDLASPDKLYYNLGCKTAVGMPFKDLATSDSILLQQSPAMDASKERTALRRLQEVGVGVLCPAQELQARPIPNAIAVYDLKQMPSKGAK--LPDGAIRYALTVRGDESDEELAKLKSSEAVMLLLRVPDEVSRVHASRRVFNFLKENSIDTPVIHHIVF 514          
BLAST of mRNA_H-paniculata_contig14699.2802.1 vs. uniprot
Match: Q5IWW3_PROWI (Plastid hydroxymethylbutenyl 4-diphosphate synthase (Fragment) n=1 Tax=Prototheca wickerhamii TaxID=3111 RepID=Q5IWW3_PROWI)

HSP 1 Score: 140 bits (354), Expect = 3.240e-39
Identity = 84/164 (51.22%), Postives = 107/164 (65.24%), Query Frame = 0
Query:    3 VSLEDLQNPMALYQTLGFKTAVGMPFKDIATADSVFLPEVPPVDDKAARTALRRMQEAGVGVMAPLAALEAAPVPNAVAVVSLEEAAQSG--GQVNLPEGAIRLAVSIKGTEEDLSPLSTISPAPIMGLINVPEGVSRVHASRRVFQHLADTNSDLAIIHHALF 164
            +SLEDL  P A Y++LG K AVGMPFKDIAT+DSV+L EVP VDD  AR ALRR+QE GV V+A   AL A+P+P+++AVVSL EA  +   G+  LP GA+RLA++I GTE +    +T      + L+    G+SRVHASRRVF+           IH   F
Sbjct:   11 LSLEDLHKPDATYRSLGCKMAVGMPFKDIATSDSVYLTEVPAVDDAVARRALRRLQEVGVHVLAEADALVASPLPDSIAVVSLAEAVAAAREGRSLLPPGAVRLALAIDGTESEAELAATGGLDATLALLRTAPGLSRVHASRRVFEXXXXXXXXXXXIHALAF 174          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14699.2802.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRY5_ECTSI2.090e-7278.051-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate syn... [more]
A0A6H5KI66_9PHAE6.930e-6278.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YGL0_9STRA2.190e-5260.871-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate syn... [more]
A0A7S3UZY5_HETAK7.340e-4960.98Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S0TXQ2_HEMAN2.900e-4355.63Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S0VYW6_9CRYP1.490e-4255.00Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A6U4N756_HEMAN1.560e-4255.63Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A2V0NPD0_9CHLO4.780e-4155.35Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
L1K0P1_GUITC2.710e-4051.23Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
Q5IWW3_PROWI3.240e-3951.22Plastid hydroxymethylbutenyl 4-diphosphate synthas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR30454:SF14-HYDROXY-3-METHYLBUT-2-EN-1-YL DIPHOSPHATE SYNTHASE (FERREDOXIN), CHLOROPLASTICcoord: 1..162
IPR0045884-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-typePANTHERPTHR304544-HYDROXY-3-METHYLBUT-2-EN-1-YL DIPHOSPHATE SYNTHASEcoord: 1..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14699contigH-paniculata_contig14699:893..2547 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14699.2802.1mRNA_H-paniculata_contig14699.2802.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14699 869..2547 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14699.2802.1 ID=prot_H-paniculata_contig14699.2802.1|Name=mRNA_H-paniculata_contig14699.2802.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=164bp
MVVSLEDLQNPMALYQTLGFKTAVGMPFKDIATADSVFLPEVPPVDDKAA
RTALRRMQEAGVGVMAPLAALEAAPVPNAVAVVSLEEAAQSGGQVNLPEG
AIRLAVSIKGTEEDLSPLSTISPAPIMGLINVPEGVSRVHASRRVFQHLA
DTNSDLAIIHHALF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004588IspG_bac-typ