mRNA_H-paniculata_contig14691.2799.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14691.2799.1 vs. uniprot
Match: A0A177TKF2_9BASI (Uncharacterized protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177TKF2_9BASI) HSP 1 Score: 127 bits (318), Expect = 8.470e-30 Identity = 80/230 (34.78%), Postives = 121/230 (52.61%), Query Frame = 1 Query: 10 DLRLKPRHRREAKESQEWENWKMAEEKEMRGMVDNGVWETIDRPKDNLAVGTKMLYKHKISKNGKVEIYKCRLVALGILQIEGIHYTKKYSSTPATVFIRMFSATAVAKDGELRHFDADQAFLKAEIDKEVYIEIPERFQYFPEAAGKLSKAIYGLVQGGRCWNIKFCD-VTAIGFQQSRADLCMFRKVVDGEVEIVVVLRVDDILSRAKDRAMMEWFATQLGGRFKLED 696 D R P+ REA E ++W WK A E E+ + + G ++ +D P+D + K + K + +G + YK R VA G QIEGI + + ++ T +RM A A D EL +D A+L E+ VYI+ PE KL KA+YGL Q GR WNI + +T +GF+QS+ D +F + V ++V+ VDD++ A ++ +QL RFK +D Sbjct: 865 DRRENPKSIREAMERKDWAKWKEAIEIELGALKETGTYQVVDTPRDANILTGKWVLTIKYNADGTISKYKARWVARGYSQIEGIDFDETHAPTARMASVRMVGALAAVDDLELIQWDYTTAYLNGELHNAVYIQPPEGVDVPAGKTWKLVKALYGLRQAGREWNIVLVEQLTDMGFRQSKTDASLFVRTEPSFV--IIVVYVDDLIIAASKDTDLKKLKSQLAARFKGKD 1092
BLAST of mRNA_H-paniculata_contig14691.2799.1 vs. uniprot
Match: A0A6D2HJE2_9BRAS (CCHC-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2HJE2_9BRAS) HSP 1 Score: 125 bits (315), Expect = 2.030e-29 Identity = 78/215 (36.28%), Postives = 113/215 (52.56%), Query Frame = 1 Query: 64 ENWKMAEEKEMRGMVDNGVWETIDRPKDNLAVGTKMLYKHKISKNGKVEIYKCRLVALGILQIEGIHYTKKYSSTPATVFIRMFSATAVAKDGELRHFDADQAFLKAEIDKEVYIEIPERFQYFPEAAGK---LSKAIYGLVQGGRCWNIKFCD-VTAIGFQQSRADLCMFRKVVDGEVEIVVVLRVDDILSRAKDRAMMEWFATQLGGRFKLED 696 E W A EM M +N VW +D P A+ K ++K KI +G ++IYK RLVA G QI G+ Y + YS IR+ ATA D E+ D AFL +++++VY+ PE F PE AGK L +AIYGL Q R WN++F + + F ++ + C+++K G +VL VDDI D +++ LG F ++D Sbjct: 529 EKWLKAAYSEMDSMSENQVWTLVDLPDGVKAIECKWVFKKKIDMDGNIQIYKARLVAKGYKQIHGVDYDETYSPVAMLKSIRILLATAAYYDYEIWQMDVKTAFLNGKLEEDVYMIQPEGFTS-PENAGKVCKLQRAIYGLKQASRSWNLRFDEAIKEFDFIRNEEEPCVYKK-TSGSAVAFLVLYVDDIFLIGNDIPLLKSVKAWLGSCFSMKD 741
BLAST of mRNA_H-paniculata_contig14691.2799.1 vs. uniprot
Match: A0A6H5L9H4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9H4_9PHAE) HSP 1 Score: 122 bits (306), Expect = 5.870e-29 Identity = 72/201 (35.82%), Postives = 113/201 (56.22%), Query Frame = 1 Query: 70 WKMAEEKEMRGMVDNGVWETI-DRPKDNLAVGTKMLYKHKISKNGKVEIYKCRLVALGILQIEGIHYTKKYSSTPATVFIRMFSATAVAKDGELRHFDADQAFLKAEIDKEVYIEIPERFQYFPEAAGKLSKAIYGLVQGGRCWNIKFCD-VTAIGFQQSRADLCMFRKVVDGEVEIVVVLRVDDILSRAKDRAMMEWFAT 666 W+ A +KE+ G G + + + P+ A+G+K ++ K ++ G + K R+VA G Q GI + S+ P+ I+ A A K +L H+D QAF+ A++ +E+Y+ PE A K+ +A+YGL Q GR W + D + G++Q RAD C+FRK+VDGEV ++V+ VDDIL A + E FA+ Sbjct: 205 WEAAMKKEIDGHDKTGTFTKVKELPEGRKAIGSKWVFSWKTNEKGLIVDVKARMVARGFSQTPGIDFHHSSSACPSAASIKTVIAVATEKGKKLAHWDVKQAFIHAKLKEEIYLRFPEGCGSMFGKAVKVERALYGLKQSGREWGFEAADALIENGYEQCRADPCVFRKLVDGEVVGLIVIYVDDILVAADEGEREELFAS 405
BLAST of mRNA_H-paniculata_contig14691.2799.1 vs. uniprot
Match: A0A6D2I3G7_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A6D2I3G7_9BRAS) HSP 1 Score: 115 bits (288), Expect = 1.480e-28 Identity = 70/181 (38.67%), Postives = 100/181 (55.25%), Query Frame = 1 Query: 94 MRGMVDNGVWETIDRPKDNLAVGTKMLYKHKISKNGKVEIYKCRLVALGILQIEGIHYTKKYSSTPATVFIRMFSATAVAKDGELRHFDADQAFLKAEIDKEVYIEIPERFQYFPEAAGK---LSKAIYGLVQGGRCWNIKFCD-VTAIGFQQSRADLCMFRKVVDGEVEIVVVLRVDDIL 624 M M +N VW +D P A+ K ++K KI +G ++IYK RLVA G QI G+ Y + YS IR+ ATA D E+ D AFL +++++VY+ PE F PE AGK L +AIYGL Q R WN++F + + F ++ + C+++K G +VL VDDIL Sbjct: 1 MDSMSENQVWTLVDLPDGVKAIECKWVFKKKIDMDGNIQIYKARLVAKGYKQIHGVDYDETYSPVAMLKSIRILLATAAYYDYEIWQMDVKTAFLNGKLEEDVYMIQPEGFTS-PENAGKVCKLQRAIYGLKQASRSWNLRFDEAIKEFDFIRNEEEPCVYKK-TSGSTVAFLVLYVDDIL 179
BLAST of mRNA_H-paniculata_contig14691.2799.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE) HSP 1 Score: 122 bits (307), Expect = 2.210e-28 Identity = 71/203 (34.98%), Postives = 107/203 (52.71%), Query Frame = 1 Query: 64 ENWKMAEEKEMRGMVDNGVWETID-RPKDNLAVGTKMLYKHKISKNGKVEIYKCRLVALGILQIEGIHYTKKYSSTPATVFIRMFSATAVAKDGELRHFDADQAFLKAEIDKEVYIEIPERFQYFPEAAGKLSKAIYGLVQGGRCWNIKFCD-VTAIGFQQSRADLCMFRKVVDGEVEIVVVLRVDDILSRAKDRAMMEWFAT 666 E W+ A +E G + G + +D P+ V +K + K +K GK++ +K RLVA G QI + Y S P++ I++ A A K L H+D QA+ A +D+EV++++P K +AIYGL Q GR W D + GF+Q +AD C+FRK+VD V +++V+ VDDIL D E A+ Sbjct: 304 EGWEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLAS 506
BLAST of mRNA_H-paniculata_contig14691.2799.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 122 bits (307), Expect = 2.450e-28 Identity = 71/203 (34.98%), Postives = 107/203 (52.71%), Query Frame = 1 Query: 64 ENWKMAEEKEMRGMVDNGVWETID-RPKDNLAVGTKMLYKHKISKNGKVEIYKCRLVALGILQIEGIHYTKKYSSTPATVFIRMFSATAVAKDGELRHFDADQAFLKAEIDKEVYIEIPERFQYFPEAAGKLSKAIYGLVQGGRCWNIKFCD-VTAIGFQQSRADLCMFRKVVDGEVEIVVVLRVDDILSRAKDRAMMEWFAT 666 E W+ A +E G + G + +D P+ V +K + K +K GK++ +K RLVA G QI + Y S P++ I++ A A K L H+D QA+ A +D+EV++++P K +AIYGL Q GR W D + GF+Q +AD C+FRK+VD V +++V+ VDDIL D E A+ Sbjct: 750 EGWEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLAS 952
BLAST of mRNA_H-paniculata_contig14691.2799.1 vs. uniprot
Match: A0A2P4X4H2_9STRA (Integrase catalytic core protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X4H2_9STRA) HSP 1 Score: 116 bits (291), Expect = 2.450e-28 Identity = 62/205 (30.24%), Postives = 115/205 (56.10%), Query Frame = 1 Query: 85 EKEMRGMVDNGVWETIDRPKDNLAVGTKMLYKHKISKNGKVEIYKCRLVALGILQIEGIHYTKKYSSTPATVFIRMFSATAVAKDGELRHFDADQAFLKAEIDKEVYIEIPERFQYFPEAAGKLSKAIYGLVQGGRCWNIKFCD-VTAIGFQQSRADLCMFRKVVDGEVEIVVVLRVDDILSRAKDRAMMEWFATQLGGRFKLED 696 ++E+R + DN WE +D P D + +K ++K K NG++E +K RLVA G Q GI + + ++ V +R+ A A +R D A+L+A +D+ +Y+ PE + + +L K++YGL Q G+ WN + + + +GF +S+ D C++ + DG++ V+ L +DD++ ++ +W LG +F+++D Sbjct: 2 QEELRAIADNATWEVVDTPSDGNLITSKWVFKLKFDNNGELERFKARLVARGFNQKYGIDFGETFAPVLKIVSLRLIVALAALWHAIIRQGDVPNAYLRAMLDRAIYMRAPEGLKLPKGKSLRLLKSLYGLKQSGKLWNDEIHNYLLELGFMRSKLDPCLYFRRSDGKLT-VLGLYIDDVVVVSQRSCDTDWTMKMLGNQFQIKD 205
BLAST of mRNA_H-paniculata_contig14691.2799.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 122 bits (307), Expect = 2.540e-28 Identity = 71/203 (34.98%), Postives = 107/203 (52.71%), Query Frame = 1 Query: 64 ENWKMAEEKEMRGMVDNGVWETID-RPKDNLAVGTKMLYKHKISKNGKVEIYKCRLVALGILQIEGIHYTKKYSSTPATVFIRMFSATAVAKDGELRHFDADQAFLKAEIDKEVYIEIPERFQYFPEAAGKLSKAIYGLVQGGRCWNIKFCD-VTAIGFQQSRADLCMFRKVVDGEVEIVVVLRVDDILSRAKDRAMMEWFAT 666 E W+ A +E G + G + +D P+ V +K + K +K GK++ +K RLVA G QI + Y S P++ I++ A A K L H+D QA+ A +D+EV++++P K +AIYGL Q GR W D + GF+Q +AD C+FRK+VD V +++V+ VDDIL D E A+ Sbjct: 1129 EGWEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLAS 1331
BLAST of mRNA_H-paniculata_contig14691.2799.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 122 bits (307), Expect = 2.550e-28 Identity = 71/203 (34.98%), Postives = 107/203 (52.71%), Query Frame = 1 Query: 64 ENWKMAEEKEMRGMVDNGVWETID-RPKDNLAVGTKMLYKHKISKNGKVEIYKCRLVALGILQIEGIHYTKKYSSTPATVFIRMFSATAVAKDGELRHFDADQAFLKAEIDKEVYIEIPERFQYFPEAAGKLSKAIYGLVQGGRCWNIKFCD-VTAIGFQQSRADLCMFRKVVDGEVEIVVVLRVDDILSRAKDRAMMEWFAT 666 E W+ A +E G + G + +D P+ V +K + K +K GK++ +K RLVA G QI + Y S P++ I++ A A K L H+D QA+ A +D+EV++++P K +AIYGL Q GR W D + GF+Q +AD C+FRK+VD V +++V+ VDDIL D E A+ Sbjct: 1149 EGWEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEELLAS 1351
BLAST of mRNA_H-paniculata_contig14691.2799.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 122 bits (307), Expect = 2.560e-28 Identity = 71/203 (34.98%), Postives = 107/203 (52.71%), Query Frame = 1 Query: 64 ENWKMAEEKEMRGMVDNGVWETID-RPKDNLAVGTKMLYKHKISKNGKVEIYKCRLVALGILQIEGIHYTKKYSSTPATVFIRMFSATAVAKDGELRHFDADQAFLKAEIDKEVYIEIPERFQYFPEAAGKLSKAIYGLVQGGRCWNIKFCD-VTAIGFQQSRADLCMFRKVVDGEVEIVVVLRVDDILSRAKDRAMMEWFAT 666 E W+ A +E G + G + +D P+ V +K + K +K GK++ +K RLVA G QI + Y S P++ I++ A A K L H+D QA+ A +D+EV++++P K +AIYGL Q GR W D + GF+Q +AD C+FRK+VD V +++V+ VDDIL D E A+ Sbjct: 1292 EGWEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLAS 1494 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14691.2799.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14691.2799.1 >prot_H-paniculata_contig14691.2799.1 ID=prot_H-paniculata_contig14691.2799.1|Name=mRNA_H-paniculata_contig14691.2799.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=233bp MANDLRLKPRHRREAKESQEWENWKMAEEKEMRGMVDNGVWETIDRPKDNback to top mRNA from alignment at H-paniculata_contig14691:5795..6493- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14691.2799.1 ID=mRNA_H-paniculata_contig14691.2799.1|Name=mRNA_H-paniculata_contig14691.2799.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=699bp|location=Sequence derived from alignment at H-paniculata_contig14691:5795..6493- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14691:5795..6493- >mRNA_H-paniculata_contig14691.2799.1 ID=mRNA_H-paniculata_contig14691.2799.1|Name=mRNA_H-paniculata_contig14691.2799.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1398bp|location=Sequence derived from alignment at H-paniculata_contig14691:5795..6493- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |