mRNA_H-paniculata_contig1469.2798.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1469.2798.1 vs. uniprot
Match: A0A6H5KYR0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYR0_9PHAE) HSP 1 Score: 620 bits (1599), Expect = 5.200e-197 Identity = 419/842 (49.76%), Postives = 497/842 (59.03%), Query Frame = 2
Query: 380 RLAWSLPWFTGRRRTRQRNEAPPSSACQAYRSTIVAEKAAK-IAPT-ARAFISARAFII-AMIVSGGTFAVCPQMAVASPFDPRLPPKSSKQPFFEGWFVRLVDHEQKLSFAVIFGSFRSRGEEGPELDQHYVSLSYLHEPIGGILPAEDEEEQNGENDVATSDN-----------------------------------------------------SEXXXXXXXXXXXXXXQERVSAIADSLGRWIHRQRQAALRGFGRDE------------FTKSIGQAG---GGDVKSREGSTIDQDTRAM-------------EDPLKGDAVDFDSTRRGRPVDGPDEAER-------------VADERDGGSTGEQNSLGPEE-MDGDFSRHEQGQHKLDNGDRSAAL-ESTRESLLEAE------GDSAGGVLDPDLAHESIDAELS-EAEEGDSNSESTVLEQTPIPPPVKELPLR----KFHPPNAVPQIPPAPPLHHQHLERTHTFHAFPAPETVTISCRGEPVERVPNLVDDPNFAWEADGVGSFTVDGDTGRLSFQLPELSVAATFRHRLPWSAEYPNSAGPEGWLQRTGLLPTHYFVHSMGSEAGYSLKAADAPRAVVGRGSIHMEANYGVSFPTGWVWAQGVSATRGLCGKLFRDGEMTTA------------AAADGSAGGEEGEKGESPA-RFVLTGGRFVIGSITTNSFVLAFRSEKHEWNFRTTDLDRITVQVSRKDNRLTVVAKSWGNERVLEADIHAPEGSFGSAIYVPTPEGFSNAPGCVESYAATATFRLYTKGEE-EENASGRPLVLREEVEFKLAALEFGGEFQDT 2533
R AWS PW RR + +A +S + KAA+ ++P F SA A +I ++++ GGT ++ P + ASPFDPR PPKS++QPFFEGWF+RLVDHEQ+LSFAVI GSFR G G ELDQHYVSLSYLHEP GG+LPAE+E XXXXXXXXXXXX Q R S IA +WI QR A LR FG +E TK AG GG+ G D+ T E+P D +S G+ + EAE +AD+ E + L + ++GD R + + +RS L ES RE+ + G +A +DP A + + EAE+ ++ V++++ P +ELP + + ++ + P + ERTHTFHAFP +TVTI CRGEPV VPNL DDP+F WEADG+GSF VDGDTGRLSFQLPELSVAA+FR+R WS E PNSAGPEGWLQRTGLLP HYFVHSMGSEAGYSLKA APRAVVGRGSIHMEANYG SFPTGWVWAQG SAT+GLCG +FRDGE+T AA G A G G K +S RFVLTGGRFVIG ITT SFVLAFRSE+H+WNFRTTDLDRI V SRKD+RLT+VAKSWG+ RVL+ADI APEGSFGSAIYVPTP+GFSNAPGCVESYAATA FRLYTKG++ E + RPLVLREEVEFKLAALEFGGE+QDT
Sbjct: 53 RTAWSPPWLA--RRLSRGKKAKATS-------VLAPNKAARRVSPAPGSTFNSALAVMIGSVLLGGGTLSLSPTVVEASPFDPRPPPKSTRQPFFEGWFIRLVDHEQRLSFAVIIGSFRGHG--GKELDQHYVSLSYLHEPKGGLLPAEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXXXXXSAQVRSSEIAKRFSKWIRAQRLAVLREFGAEEEEGDGGLEDPGPLTKGESGAGAGQGGNQPREIGENSDEPTTGTDGDGGATAGREEREEPFDDTWPDEESEGEGQADEEVGEAETTPXXXXXXXXXEGIADQGIDEDQAESDGLESRDWLEGDGGRELM--NVVRQAERSPLLRESDREATAARDVGIVETGRTAVDAIDPGAAANGGPTDSAPEAEDSGVGADEPVVQRSS---PSQELPSKLSDGRGSGDASLKHVTPR----DEATERTHTFHAFPPADTVTILCRGEPVNGVPNLRDDPSFTWEADGIGSFAVDGDTGRLSFQLPELSVAASFRYRQAWSEERPNSAGPEGWLQRTGLLPLHYFVHSMGSEAGYSLKATGAPRAVVGRGSIHMEANYGESFPTGWVWAQGCSATQGLCGNVFRDGELTNPDGGSVQEGSARRRAAGGKADGLAGPKRDSATPRFVLTGGRFVIGPITTTSFVLAFRSERHKWNFRTTDLDRIVVTASRKDHRLTLVAKSWGDNRVLKADIRAPEGSFGSAIYVPTPDGFSNAPGCVESYAATARFRLYTKGDKLEGDGVTRPLVLREEVEFKLAALEFGGEYQDT 874
BLAST of mRNA_H-paniculata_contig1469.2798.1 vs. uniprot
Match: D8LQ64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ64_ECTSI) HSP 1 Score: 589 bits (1519), Expect = 9.460e-188 Identity = 379/696 (54.45%), Postives = 442/696 (63.51%), Query Frame = 2
Query: 668 VRLVDHEQKLSFAVIFGSFRSRGEEGPELDQHYVSLSYLHEPIGGILPAEDEEEQNGENDVATSDNSEXXXXXXXXXXXXXXQERVSAIADSLGRWIHRQRQAALRGFGRDE------------FTKSIGQAGGGDVKSRE--------------------GSTIDQDTRAMEDPLKGDAVDFDSTRRGRPVD-------------GPDEAERVADERDGGSTGEQNSL----------GPEEMDGDFSRHEQGQHKLDNGDRSAALESTRESLLEAEGDSAGGVLDPD-LAHESIDAELSEAEEGDSNSESTVLEQTPIPPPVKELPLRKFHPPNA----VPQIPPAPPLHHQHLERTHTFHAFPAPETVTISCRGEPVERVPNLVDDPNFAWEADGVGSFTVDGDTGRLSFQLPELSVAATFRHRLPWSAEYPNSAGPEGWLQRTGLLPTHYFVHSMGSEAGYSLKAADAPRAVVGRGSIHMEANYGVSFPTGWVWAQGVSATRGLCGKLFRDGEMTTA------------AAADGSAGGEEGEKGESPA-RFVLTGGRFVIGSITTNSFVLAFRSEKHEWNFRTTDLDRITVQVSRKDNRLTVVAKSWGNERVLEADIHAPEGSFGSAIYVPTPEGFSNAPGCVESYAATATFRLYTKGEE-EENASGRPLVLREEVEFKLAALEFGGEFQDT 2533
+RLVDHEQ+LSFAVI GSFR G G ELDQHYVSLSYLHEP GG+LPAE E+N + T+ XXXXXXXXXXXXX Q R S IA +WI QR A LR FG +E TK G++G G V+ + G+T ++ R E+P + +S +G+ + PD + +AD+ + E + L G E M+ R L DR A R+ + G +A +DP A+E EAE+ ++ V++++ P +ELP + + + + P H + ERTHTFHAFP +TVTI CRGEPV VPNL DDP+F WEADG+GSF VDGD GRLSFQLPELSVAA+FR+R PWS E PNSAGPEGWLQRTGLLP HYFV SMGSEAGYSLKA APRAVVGRGSIHMEANYG SFPTGWVWAQG SAT+GLCG +FRDGE+T AA G A G G K +S RFVLTGGRFVIG ITT SFVLAFRSE+H WNFRTTDLDRI V SRKD+RLT+VAKSWG+ RVL+ADI APEGSFGSAIYVPTPEGFSNAPGCVESYAATA FRLYTKG++ E + RPLVLREEVEFKLAALEFGGE+QDT
Sbjct: 27 LRLVDHEQRLSFAVIIGSFRGHG--GKELDQHYVSLSYLHEPKGGLLPAE---EENDPEEEPTAXXXXXXXXXXXXXXXXXAQARSSEIAKRFSKWIRAQRLAVLREFGAEEEESDGGLEDPGALTK--GESGAGAVQGEDQSPETGENSAEPTTGTDGDDGATAGREER--EEPFDDTLPEEESEGQGQGDEEVGEAETTPETETAPDREQDIADQGNDEDEAESDGLESRDWLEGDGGGELMNAVRKRQAGRSPLLRASDREATA--ARDVGMVETGRTAVDAIDPGPAANEGPTDSAPEAEDSGVGADEPVVQRSS---PSQELPSKLSGGGGSGGASLKHVTP----HDEATERTHTFHAFPPADTVTILCRGEPVNGVPNLRDDPSFTWEADGIGSFAVDGDKGRLSFQLPELSVAASFRYRQPWSEERPNSAGPEGWLQRTGLLPLHYFVQSMGSEAGYSLKATGAPRAVVGRGSIHMEANYGESFPTGWVWAQGCSATKGLCGNVFRDGELTNPDGGSAQEASAGRRAAGGKADGLGGSKKDSATPRFVLTGGRFVIGPITTTSFVLAFRSERHNWNFRTTDLDRIVVTASRKDHRLTLVAKSWGDNRVLKADIRAPEGSFGSAIYVPTPEGFSNAPGCVESYAATARFRLYTKGDKLEGDGVTRPLVLREEVEFKLAALEFGGEYQDT 704
BLAST of mRNA_H-paniculata_contig1469.2798.1 vs. uniprot
Match: A0A835Z7D9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7D9_9STRA) HSP 1 Score: 257 bits (657), Expect = 3.040e-72 Identity = 151/329 (45.90%), Postives = 188/329 (57.14%), Query Frame = 2
Query: 1559 RTHTFHAFPAPETVTISCRGEPVERVPNLVDDPNFAWEADGVGSFTVDGDTGRLSFQLPELSVAATFRHRLPWSAEYPNSAGPEGWLQRTGLLPTHYFVHSMGSEAGYSLKAA-DAPRAVVGRGSIHMEANYGVSFPTGWVWAQGVSATRGLCGKLFRDGEMTTAAAADGSAGGEEGEKGESPARFVLTGGRFVIGSITTNSFVLAFRSEKHEWNFRTTDLDRIT-VQVSRKDNRLTVVAKSWGNERVLEAD--IHAPEGSFGSAIYVPTPEGFSNAPGCVESYAATATFRLYTKGEEEENASGRPLVLREEVEFKLAALEFGGEFQDT 2533
+THT++ FP P V+I G P R P+ PNF W A GVG V ++G L F +PE SV A F R+PWS PN GPEGWL TGLLP HYFVHS GS A Y +A D G G +HME NYG FP WVW QG S + L DGS G + FVLTGG+F IG +T+ ++V+A R EWNFRTTDLD +T +Q+SRK + + A S R+LE + APE SFG I VPT +G+S +PGCVESY A A+FR Y K E+ + L+L ++V LAA+EFGG +Q T
Sbjct: 76 KTHTYNFFPDPRAVSIDANGAPPVRRPSRSTPPNFRWSAAGVGELLVQPESGTLEFSVPEASVKAKFHGRIPWSRSRPNKDGPEGWLAGTGLLPLHYFVHSFGSAAEYEFEAKHDKAEKCSGSGRLHMECNYGDMFPHAWVWGQGCSRPPTMATHL-----------GDGSIGSGDIPADFQQLSFVLTGGQFRIGPLTSQAWVIALRWGDEEWNFRTTDLDEVTTLQLSRKARAIRLRALSRCKTRLLEVRDVLVAPEHSFGKPIAVPTHKGWSTSPGCVESYNAAASFRCYHK----EHGQWQ-LILEKQV--PLAAMEFGGAYQST 386
BLAST of mRNA_H-paniculata_contig1469.2798.1 vs. uniprot
Match: A0A7S4PYL0_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4PYL0_9DINO) HSP 1 Score: 190 bits (482), Expect = 4.880e-49 Identity = 110/293 (37.54%), Postives = 147/293 (50.17%), Query Frame = 2
Query: 1658 NFAWEADGVGSFTVDGDTGRLSFQLPELSVAATFRHRLPWSAEYPNSAGPEGWLQRTGLLPTHYFVHSMGSEAGYSLKAADAPRAVVGRGSIHMEANYGVSFPTGWVWAQGVSATRGLCGKLFRDGEMTTAAAADGSAGGEEGEKGESPARFVLTGGRFV-IGSITTNSFVLAFRSEKHEWNFRTTDLDRITVQVSRKDNRLTVVAKSWGNERVLEADIHAPEGSFGSAIYVPTPEGFSNAPGCVESYAATATFRLYTKGEEEENASGRPLVLREEVEFKLAALEFGGEFQDT 2533
NF W + G V+ LSF L V A R+PWSAE P++AGPEGW++R L HY+VHS+ S A Y+L A A+ GRG HME NYG +FP GW+W Q + A+ G+ + VLT GRF+ +G + ++ V+A+RS + W+FRTTDLD I + S + VA+ W + L + AP GSF +Y PT GFS+ PGC ESY+A Y +G V E LAALEFGG + D+
Sbjct: 112 NFTWRSTR-GELEVNDSAALLSFAFDSLHVRARLSARVPWSAEAPDAAGPEGWVRRLPALTCHYYVHSLASRAEYTLTPAGGS-AIEGRGHAHMEGNYGRTFPQGWIWLQAIGASGGV--------------------------------QVVLTAGRFLSLGPLGISAVVMAYRSPQLHWDFRTTDLDAICWRGSAAGGWFSAVARHWTRDEELRLTVQAPPGSFSDRLYFPTRSGFSDTPGCRESYSAVVDVVAYRRG-----------VALERQRVPLAALEFGGTYLDS 359
BLAST of mRNA_H-paniculata_contig1469.2798.1 vs. uniprot
Match: A0A812TWY2_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812TWY2_9DINO) HSP 1 Score: 181 bits (460), Expect = 9.630e-45 Identity = 114/323 (35.29%), Postives = 157/323 (48.61%), Query Frame = 2
Query: 1568 TFHAFPAPETVTISCRGEPVERVPNLVDDPNFAWEADGVGSFTVDGDTGRLSFQLPE-LSVAATFRHRLPWSAEYPNSAGPEGWLQR--TGLLPTHYFVHSMGSEAGYSLKAADAPRAVVGRGSIHMEANYGVSFPTGWVWAQGVSATRGLCGKLFRDGEMTTAAAADGSAGGEEGEKGESPARFVLTGGRFVIGSITTNSFVLAFRSEKHEWNFRTTDLDRITVQVSRKDNRLTVVAKSWGNERVLEADIHAPEGSFGSAIYVPTPEGFSNAPGCVESYAATATFRLYTKGEEEENASGRPLVLREEVEFKLAALEFGGEFQ 2527
T FPA +V I+ RG PV+R F E++ VG V+ L F P L + A+ +R+PW ++ GPEGW R +GLLPTHYFVHS+GS A YS+ + G G H EANYG FP+ W W QG+S G+ ++ +LTGG F + +T F+LA+RS + W+FR+ DLD I QV LT+ A R LE + AP G+F +Y PT EG+SN PG VESY A A +++ +G ++ P V+ + A E G + Q
Sbjct: 78 TEQVFPAEASVRITDRGLPVDRELPRNQPAVFVVESE-VGRLAVNDSKAELLFNFPSGLRIEASLANRIPWDEACRDTCGPEGWAGRLPSGLLPTHYFVHSLGSTAVYSVNG------LRGSGFAHQEANYGSFFPSAWTWVQGIS--------------------------------GDGGSQLLLTGGAFTVAELTARQFLLAYRSPRFHWDFRSVDLDHIVTQVDACQGLLTLRASKPLTGRQLELSVRAPLGTFSEPLYFPTREGWSNRPGSVESYRARALVKIFHRGVLQDTRVTMPQVVSDRACDGTAGDEEGTDVQ 361
BLAST of mRNA_H-paniculata_contig1469.2798.1 vs. uniprot
Match: A0A812QNU8_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812QNU8_9DINO) HSP 1 Score: 171 bits (433), Expect = 7.130e-42 Identity = 111/320 (34.69%), Postives = 159/320 (49.69%), Query Frame = 2
Query: 1568 TFHAFPAPETVTISCRGEPVERVPNLVDDPNFAWEADGVGSFTVDGDTGRLSFQLPE-LSVAATFRHRLPWSAEYPNSAGPEGWLQR--TGLLPTHYFVHSMGSEAGYSLKAADAPRAVVGRGSIHMEANYGVSFPTGWVWAQGVSATRGLCGKLFRDGEMTTAAAADGSAGGEEGEKGESPARFVLTGGRFVIGSITTNSFVLAFRSEKHEWNFRTTDLDRITVQVSRKDNRLTVVAKSWGNERVLEADIHAPEGSFGSAIYVPTPEGFSNAPGCVESYAATATFRLYTKGEEEENASGRPLVLREEVEFKLAALEFGG 2518
T FP+ +V I+ RG PV + F E++ +G F V+ L P L V A+ +R+PW A ++ GPEGW R +GLLPTHYFVHS+GS A Y++ + G G H EANYG FP+ W W +G+S+ DGS+ + +LTGG F + +T F+LA+RS + W+FR+ ++D I QV + L + A + R LE ++ A G+F +Y PT EG+SN PG VESY A A +++ G + A L R E +A + FGG
Sbjct: 77 TEQVFPSQSSVRITDRGRPVNKELPRSQPAIFEVESE-IGRFAVNDSKSELLLTFPSGLKVEASLDNRVPWDAACKDTCGPEGWAGRLPSGLLPTHYFVHSLGSTATYAVNE------LRGFGFAHQEANYGSFFPSAWTWVEGISS--------------------DGSS------------QLLLTGGAFTLAELTARQFLLAYRSPRFHWDFRSVNMDHIVAQVDACRSLLVLSASRVLSGRRLELEVRAVPGTFSDPLYFPTREGWSNRPGSVESYRARAWVKVFQHGVLQ--ARCLKLSPRTEQRASVAGVLFGG 355
BLAST of mRNA_H-paniculata_contig1469.2798.1 vs. uniprot
Match: A0A812WCK3_9DINO (VTE4 protein (Fragment) n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812WCK3_9DINO) HSP 1 Score: 158 bits (400), Expect = 2.250e-35 Identity = 101/284 (35.56%), Postives = 140/284 (49.30%), Query Frame = 2
Query: 1682 VGSFTVDGDTGRLSFQLPE-LSVAATFRHRLPWSAEYPNSAGPEGWLQR--TGLLPTHYFVHSMGSEAGYSLKAADAPRAVVGRGSIHMEANYGVSFPTGWVWAQGVSATRGLCGKLFRDGEMTTAAAADGSAGGEEGEKGESPARFVLTGGRFVIGSITTNSFVLAFRSEKHEWNFRTTDLDRITVQVSRKDNRLTVVAKSWGNERVLEADIHAPEGSFGSAIYVPTPEGFSNAPGCVESYAATATFRLYTKGEEEENASGRPLVLREEVEFKLAALEFGGEF 2524
+G F +G + F P ++A R+ W+A+ P GPEGW+QR + +LPTHYFV ++ S Y L G+G H E NYG FP+ +VW+QG++ DG T + VLTGG+F I +TTN ++LAFRS+ +W FRT D +V + +++A+S G R LE I AP SF I+VPT +GFS PG E++ ATA RL+ R + E FK AALEFGG +
Sbjct: 108 LGRFQTNGSSSSFDFSFPSGFRLSAQLSGRILWNADKPLE-GPEGWVQRLPSAMLPTHYFVETLASPTDYELNGLQ------GQGFAHQEMNYGKRFPSAFVWSQGIA-----------DGGTT---------------------QLVLTGGKFTISGLTTNQYILAFRSKHRQWTFRTIDGHGFRDEVDGCNGTFSLIARSRG--RRLELMISAPLSSFSENIFVPTAKGFSRTPGSTETHTATAVVRLW---------EARQKRVAEYATFKQAALEFGGHY 341
BLAST of mRNA_H-paniculata_contig1469.2798.1 vs. uniprot
Match: A0A812JPH0_9DINO (VTE4 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812JPH0_9DINO) HSP 1 Score: 159 bits (402), Expect = 2.820e-35 Identity = 103/284 (36.27%), Postives = 139/284 (48.94%), Query Frame = 2
Query: 1682 VGSFTVDGDTGRLSFQLPE-LSVAATFRHRLPWSAEYPNSAGPEGWLQRT--GLLPTHYFVHSMGSEAGYSLKAADAPRAVVGRGSIHMEANYGVSFPTGWVWAQGVSATRGLCGKLFRDGEMTTAAAADGSAGGEEGEKGESPARFVLTGGRFVIGSITTNSFVLAFRSEKHEWNFRTTDLDRITVQVSRKDNRLTVVAKSWGNERVLEADIHAPEGSFGSAIYVPTPEGFSNAPGCVESYAATATFRLYTKGEEEENASGRPLVLREEVEFKLAALEFGGEF 2524
+G F +G L F P L ++A R+ W+AE P GPEGW +R +LPTHYFV ++ S Y L G+G H E NYG FP+ +VW+QG++ DG T + VLTGG+F I +TTN ++LAFRS+ +W FRT D +V + +++A+S G R LE I AP SF I+VPT +GFS PG E++ ATA RL+ R + E FK AALEFGG +
Sbjct: 126 LGRFQTNGSNSALDFSFPSGLRLSAQLSGRILWNAEKPLE-GPEGWARRLPPAMLPTHYFVETLASPTDYELNGHQ------GQGFAHQEMNYGKRFPSAFVWSQGIA-----------DGGTT---------------------QLVLTGGKFTISGLTTNQYILAFRSKHRQWTFRTIDGHGFRDEVDGCNGTFSLIARSRG--RRLELVISAPVSSFSENIFVPTAKGFSRTPGSTETHTATAVVRLW---------EARQKRVAEYATFKQAALEFGGHY 359
BLAST of mRNA_H-paniculata_contig1469.2798.1 vs. uniprot
Match: A0A482SJ29_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJ29_9ARCH) HSP 1 Score: 139 bits (349), Expect = 3.560e-31 Identity = 106/321 (33.02%), Postives = 138/321 (42.99%), Query Frame = 2
Query: 1571 FHAFPAPETVTISCRGEPVERVPNLVDDPNFAWEADGVGSFTVDGDTGRLSFQLP-ELSVAATFRHRLPWS-AEYPNSAGPEGWLQRTGLLPTHYFVHSMGSEAGYSLKAADAPRAVVGRGSIHMEANYGVSFPTGWVWAQGVSATRGLCGKLFRDGEMTTAAAADGSAGGEEGEKGESPARFVLTGGRFVIG-SITTNSFVLAFRSEKHEWNFRTTDLDRITVQVSRKDNRLTVVAKSWGNERVLEADIHAPEGSFGSAIYVPTPEGFSNAPGCVESYAATATFRLYTKGEEEENASGRPLVLREEVEFKLAALEFGGEF 2524
FH+FP P +VT+S E + +D W+A+ VG F + SF P S+ R+PW +E GPEGWL T LLP HYFVHS+GS Y L + + G G H+E N+G FP GW WAQ +++ A F L GRFVIG NS + R R+TD+DRI + K+ V S + I + S +++PT GFS+ PGCVE+Y A A+ G EEE EF L ALEFGG F
Sbjct: 142 FHSFPDPSSVTVS------EHKDSYLD---ITWKANNVGYFQFNSTACAGSFTFPYNSSLQFESSSRIPWQPSEKIGFVGPEGWLGLTSLLPCHYFVHSVGSTTSYKLHTPNLGD-MEGVGYAHIEGNHGTFFPEGWTWAQAIASNN--------------------------------TASFSLVVGRFVIGPGAPMNSMMFLRRRNGKTAVIRSTDMDRIKYSLDGKERTAYVQGLSLIKGFQVRIAIRTTDDSA-HRVFIPTINGFSDQPGCVETYTAVASVVFQEVGMEEEI-----------YEFPLTALEFGGSF 408
BLAST of mRNA_H-paniculata_contig1469.2798.1 vs. uniprot
Match: A0A7S0QBM1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0QBM1_9EUKA) HSP 1 Score: 116 bits (291), Expect = 1.590e-26 Identity = 57/128 (44.53%), Postives = 75/128 (58.59%), Query Frame = 2
Query: 1625 VERVPNL------VDDPNFAWEADGVGSFTVDGDTGRLSFQLPELSVAATFRH-RLPWSAEYPNSAGPEGWLQRTGLLPTHYFVHSMGSEAGYSLKAADAPRAVVGRGSIHMEANYGVSFPTGWVWAQ 1987
+ R+P+L DP+ W + G VDGD + ++ L +AA RLPWS P+ AGPEGWL RT LLP HYF+HS S Y L+ + ++ GRG+ H+E NYG +FPTGWVWAQ
Sbjct: 2 ISRLPHLSPRSGVASDPHLEWRSAANGGIVVDGDAAIIDVRVGPLRLAANLSSPRLPWSDAAPDRAGPEGWLGRTNLLPCHYFIHSFASPTSYHLERGRS--SLTGRGTSHLERNYGANFPTGWVWAQ 127 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1469.2798.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1469.2798.1 >prot_H-paniculata_contig1469.2798.1 ID=prot_H-paniculata_contig1469.2798.1|Name=mRNA_H-paniculata_contig1469.2798.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=822bp MRAGLLTLLSASSVQLSIFISTSNRFIGGVAALGMCNHLVLSRNPFVLTLback to top mRNA from alignment at H-paniculata_contig1469:8884..19027- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1469.2798.1 ID=mRNA_H-paniculata_contig1469.2798.1|Name=mRNA_H-paniculata_contig1469.2798.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10144bp|location=Sequence derived from alignment at H-paniculata_contig1469:8884..19027- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1469:8884..19027- >mRNA_H-paniculata_contig1469.2798.1 ID=mRNA_H-paniculata_contig1469.2798.1|Name=mRNA_H-paniculata_contig1469.2798.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4932bp|location=Sequence derived from alignment at H-paniculata_contig1469:8884..19027- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |