mRNA_H-paniculata_contig14681.2796.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig14681.2796.1
Unique NamemRNA_H-paniculata_contig14681.2796.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig14681.2796.1 vs. uniprot
Match: D7FK61_ECTSI (Efflux ABC transporter, permease/ATP-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK61_ECTSI)

HSP 1 Score: 304 bits (779), Expect = 2.860e-97
Identity = 166/208 (79.81%), Postives = 180/208 (86.54%), Query Frame = 1 
Query:    1 ALIGQMRRILELARPERFLIGGAIGLLCGSTAVSLAVPKVMGGLIDAVMQNTGTYGPMEAAGILMTMFGMQSVMLASSRSSLMAVAGERVAARLREKAFGAMAVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSAAQGLRNMLMVVGCTGMLAYLSPQLAVVSVAIFPPVAGIGVWFGRRMKKQQKGVQEALAASSAVAEEVRQNF 624
            AL  Q RR+LELARPE  LIGG+I LL GST +SLAVPKVMGGLID+VMQ TG Y P EAAGILM +FG QS+ML + RS LM VAGERVAARLR  AFG+M VQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSAAQGLRN+LMVVGCTGML  LSP+LA+VSVA+FPPVAG+GVWFGRRMKKQQK VQ+ALA SSAVAEEV  N 
Sbjct:   35 ALTDQARRLLELARPESKLIGGSIVLLLGSTTISLAVPKVMGGLIDSVMQGTGAYTPWEAAGILMALFGAQSIML-TGRSGLMTVAGERVAARLRNLAFGSMVVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSAAQGLRNLLMVVGCTGMLCNLSPELAMVSVAVFPPVAGVGVWFGRRMKKQQKKVQQALAGSSAVAEEVLSNI 241
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BLAST of mRNA_H-paniculata_contig14681.2796.1 vs. uniprot
Match: A0A835ZGY2_9STRA (Efflux ABC transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGY2_9STRA)

HSP 1 Score: 211 bits (537), Expect = 7.590e-62
Identity = 119/194 (61.34%), Postives = 147/194 (75.77%), Query Frame = 1 
Query:   31 ELARPERFLIGGAIGLLCGSTAVSLAVPKVMGGLIDAVMQNTGTYGPMEAAGILMTMFGMQSVMLASSRSSLMAVAGERVAARLREKAFGAMAVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSAAQGLRNMLMVVGCTGMLAYLSPQLAVVSVAIFPPVAGIGVWFGRRMKKQQKGVQEALAASSAVAEEV 612
             LARPE  LIG  + LL G++ VSLA P+VMGGLIDAVM   GT  P EAA +LM +F +QS+ML   RS+ ++VAGER+AARLR + F A+A Q+ AFFD N TG+LVNRLASDVLLVQ ++T+S AQGLR++ +V G + M+  +SP LA VSVAIFPPV G G +FGR++K QQK VQ ALA SS VAEEV
Sbjct:    3 SLARPEGRLIGSGLTLLAGTSCVSLAFPRVMGGLIDAVMGGAGTTTPYEAAAVLMGLFSLQSLMLVG-RSAALSVAGERIAARLRRRLFQAVAKQDMAFFDANSTGELVNRLASDVLLVQKALTSSTAQGLRSLFLVTGSSVMMYTMSPYLAAVSVAIFPPVMGAGWYFGRKLKAQQKSVQAALAGSSGVAEEV 195
[Close]
BLAST of mRNA_H-paniculata_contig14681.2796.1 vs. uniprot
Match: F2UC12_SALR5 (ABC protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UC12_SALR5)

HSP 1 Score: 163 bits (413), Expect = 2.460e-43
Identity = 88/206 (42.72%), Postives = 145/206 (70.39%), Query Frame = 1 
Query:    7 IGQMRRILELARPERFLIGGAIGLLCGSTAVSLAVPKVMGGLIDAVMQNTGTYGPMEAAGILMTMFGMQSVMLASSRSSLMAVAGERVAARLREKAFGAMAVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSAAQGLRNMLMVVGCTGMLAYLSPQLAVVSVAIFPPVAGIGVWFGRRMKKQQKGVQEALAASSAVAEEVRQNF 624
            + Q +RILELA+ E+ L+ G++GLL GS++++LA+PK+MG ++D  +    +      +  L+ +FG Q+VM+ S R ++  VAGER++ARLR+  F A+  ++T+FFD   TG+L NRL++D LL+Q ++T+S +QG+R+ ++ +G  GM+ + SPQL  +++   PP+AG  V+ GRRMK++Q+ VQ+ LA S+A+A EV  N 
Sbjct:  106 VSQFKRILELAQHEKALLLGSLGLLVGSSSITLALPKLMGVVLDIALDPVASVSTSTLSFGLLGLFGAQAVMMLS-RLAMQLVAGERISARLRQSVFEALMRRQTSFFDVTPTGELTNRLSADCLLLQKTITSSLSQGVRSGMLALGSIGMMMHTSPQLLGLALIALPPLAGTAVYLGRRMKRRQEQVQQKLADSTALATEVLANI 310
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BLAST of mRNA_H-paniculata_contig14681.2796.1 vs. uniprot
Match: A0A7S0THF0_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0THF0_HEMAN)

HSP 1 Score: 154 bits (389), Expect = 2.630e-40
Identity = 86/197 (43.65%), Postives = 128/197 (64.97%), Query Frame = 1 
Query:   22 RILELARPERFLIGGAIGLLCGSTAVSLAVPKVMGGLIDAVMQNTGTYGPMEAAGILMTMFGMQSVMLASSRSSLMAVAGERVAARLREKAFGAMAVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSAAQGLRNMLMVVGCTGMLAYLSPQLAVVSVAIFPPVAGIGVWFGRRMKKQQKGVQEALAASSAVAEEV 612
            R+L L  PE+ L+  A+  +  +T +SL  P  +G L+D          P+  AG L+ +FG+Q +M+ ++R  ++ VAGER+AARLR + F A+  Q+ +FFD  RTG+L+NRLASD  ++Q ++T +    L++  MVVGCT ML Y SP+LA+VSV + PP   + V+ GR MK++Q  VQ+ALA +S  AEEV
Sbjct:   26 RVLRLVEPEKRLLLLAMSTIVVTTPISLFFPMAVGKLLDVATTADPIITPVTVAGALLVVFGLQGLMM-TTRDGMLTVAGERMAARLRRQTFEAVLRQDMSFFDETRTGELLNRLASDTSVIQKAITNNVTSALKSAGMVVGCTAMLIYTSPKLALVSVLVLPPGGIVAVYMGRFMKRKQSEVQDALAKTSQQAEEV 221
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BLAST of mRNA_H-paniculata_contig14681.2796.1 vs. uniprot
Match: A0A7S1GV67_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GV67_HEMAN)

HSP 1 Score: 154 bits (389), Expect = 3.220e-40
Identity = 86/197 (43.65%), Postives = 128/197 (64.97%), Query Frame = 1 
Query:   22 RILELARPERFLIGGAIGLLCGSTAVSLAVPKVMGGLIDAVMQNTGTYGPMEAAGILMTMFGMQSVMLASSRSSLMAVAGERVAARLREKAFGAMAVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSAAQGLRNMLMVVGCTGMLAYLSPQLAVVSVAIFPPVAGIGVWFGRRMKKQQKGVQEALAASSAVAEEV 612
            R+L L  PE+ L+  A+  +  +T +SL  P  +G L+D          P+  AG L+ +FG+Q +M+ ++R  ++ VAGER+AARLR + F A+  Q+ +FFD  RTG+L+NRLASD  ++Q ++T +    L++  MVVGCT ML Y SP+LA+VSV + PP   + V+ GR MK++Q  VQ+ALA +S  AEEV
Sbjct:  108 RVLRLVEPEKRLLLLAMSTIVVTTPISLFFPMAVGKLLDVATTADPIITPVTVAGALLVVFGLQGLMM-TTRDGMLTVAGERMAARLRRQTFEAVLRQDMSFFDETRTGELLNRLASDTSVIQKAITNNVTSALKSAGMVVGCTAMLIYTSPKLALVSVLVLPPGGIVAVYMGRFMKRKQSEVQDALAKTSQQAEEV 303
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BLAST of mRNA_H-paniculata_contig14681.2796.1 vs. uniprot
Match: A0A7S4F061_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F061_CHRCT)

HSP 1 Score: 152 bits (384), Expect = 1.400e-39
Identity = 87/194 (44.85%), Postives = 124/194 (63.92%), Query Frame = 1 
Query:   22 RILELARPERFLIGGAIGLLCGSTAVSLAVPKVMGGLIDAVMQNTGTYGPMEAAGILMTMFGMQSVMLASSRSSLMAVAGERVAARLREKAFGAMAVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSAAQGLRNMLMVVGCTGMLAYLSPQLAVVSVAIFPPVAGIGVWFGRRMKKQQKGVQEALAASSAVA 603
            R L L  PER L+G  + LL  S+ +S++ PK  G ++D  +    ++ P  AAG L+ +F +Q+V++A  RS L+AVAGERVAARLR  AF ++  QE AFFD  RTG+L+NRL++D   +Q  VTT    G R  LM+VGC  M+  LSP L  ++V++FPP        G+R+K +Q  VQ+ALA ++A A
Sbjct:  171 RSLPLVYPERKLLGIGLALLASSSVISVSFPKAAGAVLDQCLSAEPSWTPHAAAGALLALFTLQAVLVAG-RSQLLAVAGERVAARLRTSAFESLLRQELAFFDSQRTGELLNRLSADTAALQKVVTTHLVAGARGALMMVGCAAMMVSLSPSLCALAVSVFPPAVLFSRAAGQRVKSKQSAVQDALADATAEA 363
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BLAST of mRNA_H-paniculata_contig14681.2796.1 vs. uniprot
Match: A0A6L2Q6I2_COPFO (Uncharacterized protein n=1 Tax=Coptotermes formosanus TaxID=36987 RepID=A0A6L2Q6I2_COPFO)

HSP 1 Score: 152 bits (383), Expect = 2.800e-39
Identity = 94/211 (44.55%), Postives = 139/211 (65.88%), Query Frame = 1 
Query:    7 IGQMRRILELARPERFLIGGAIGLLCGSTAVSLAVPKVMGGLIDAVMQNTGTYGPMEAAGILMTMFGMQSVMLAS----------SRSSLMAVAGERVAARLREKAFGAMAVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSAAQGLRNMLMVVGCTGMLAYLSPQLAVVSVAIFPPVAGIGVWFGRRMKKQQKGVQEALAASSAVAEE 609
            + + RR+L LA+PE++ + GAI LL  S++V++A+P  +G +ID +     T  P++  G L T+    SV+L             R  LM+V+G+R+   LR+  FGA+  QE AFFD+++TG+LVNRL++D LLV  SVT + + GLR+ +MVV    M+ YLSPQLA+V +AI PPVAG+ V +GR ++K  K VQ++LAA+  VAEE
Sbjct:   78 VPEARRLLSLAKPEKWKLFGAICLLMVSSSVTMAIPFCLGRVIDIIY----TSDPLKVRGNLTTL----SVVLLGVFLVGGLCNFGRVYLMSVSGQRIVQTLRQTVFGAIVKQEIAFFDKSKTGELVNRLSADTLLVSQSVTMNISDGLRSTIMVVAGGSMMFYLSPQLALVGLAIVPPVAGMAVIYGRFVRKITKSVQDSLAAAIHVAEE 280
[Close]
BLAST of mRNA_H-paniculata_contig14681.2796.1 vs. uniprot
Match: A0A2R5G1M6_9STRA (ABC transporter ATP-binding protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G1M6_9STRA)

HSP 1 Score: 151 bits (381), Expect = 5.340e-39
Identity = 88/203 (43.35%), Postives = 131/203 (64.53%), Query Frame = 1 
Query:   16 MRRILELARPERFLIGGAIGLLCGSTAVSLAVPKVMGGLIDAVMQNTGTYGPMEAAGILMTMFGMQSVMLASSRSSLMAVAGERVAARLREKAFGAMAVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSAAQGLRNMLMVVGCTGMLAYLSPQLAVVSVAIFPPVAGIGVWFGRRMKKQQKGVQEALAASSAVAEEVRQNF 624
            +RRIL +A PE  LIG ++G    ++++SL  P  +G ++D  + ++    P   AG L  +F  Q  ++   R++++ VAGER+ AR R++ F ++  Q+  FFDR+RTG+L+NRL++D  LVQ SVT +   GLR+  MVVG T ML Y SP LA+VS+++ PPV     +FGR +K +Q  VQ+ALA +S VAEEV  N 
Sbjct:    4 LRRILGMAAPESRLIGASMGTQVITSSISLVFPAAIGRILDLSLSDSTGLSPTLVAGTLTGLFIFQGALIVG-RTAMLNVAGERLIARFRKQLFASILAQDLHFFDRSRTGELINRLSTDTQLVQKSVTGNLVSGLRSSFMVVGGTMMLFYTSPTLALVSLSVIPPVGVAARYFGRYLKGRQAKVQDALAETSTVAEEVIANI 205
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BLAST of mRNA_H-paniculata_contig14681.2796.1 vs. uniprot
Match: UPI0018859ED4 (ATP-binding cassette sub-family B member 10, mitochondrial-like n=3 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI0018859ED4)

HSP 1 Score: 149 bits (377), Expect = 1.660e-38
Identity = 88/206 (42.72%), Postives = 131/206 (63.59%), Query Frame = 1 
Query:   13 QMRRILELARPERFLIGGAIGLLCGSTAVSLAVPKVMGGLIDAVMQNTGTYGPMEAAGILMTMFGMQSVMLASS--RSSLMAVAGERVAARLREKAFGAMAVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSAAQGLRNMLMVVGCTGMLAYLSPQLAVVSVAIFPPVAGIGVWFGRRMKKQQKGVQEALAASSAVAEEVRQNF 624
            +MRR++ LARPER+ IGGA+GLL  S+AV++ VP  +G ++D + Q            I + + G+  V  A++  R  LM ++G R+A +LR   FGA+  QE AFFDR+RTG+LVNRL++D  LV  SVT + + GLR   M      M+ Y+S +LA+V ++I PPVA + V +GR +++  + VQ+ LA ++AVAEE   N 
Sbjct:   53 EMRRLMALARPERWRIGGAVGLLLVSSAVTMTVPFAIGRVVDIIYQEEADTAGQRLITICLALGGVFIVGAAANCGRVYLMGISGARIAQQLRVSVFGALLRQEVAFFDRSRTGELVNRLSADTALVSQSVTMNISDGLRATAMASASVSMMFYVSTKLALVGLSIVPPVAMVAVVYGRYVRRITRAVQDGLADANAVAEEKLANI 258
[Close]
BLAST of mRNA_H-paniculata_contig14681.2796.1 vs. uniprot
Match: A0A7S1CN48_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CN48_9STRA)

HSP 1 Score: 149 bits (375), Expect = 2.180e-38
Identity = 85/196 (43.37%), Postives = 130/196 (66.33%), Query Frame = 1 
Query:   22 RILELARPERFLIGGAIGLLCGSTAVSLAVPKVMGGLIDAVMQNTGTYGPMEAAGILMTMFGMQSVMLASSRSSLMAVAGERVAARLREKAFGAMAVQETAFFDRNRTGDLVNRLASDVLLVQGSVTTSAAQGLRNMLMVVGCTGMLAYLSPQLAVVSVAIFPPVAGIGVWFGRRMKKQQKGVQEALAASSAVAEE 609
            R++ LARPE       +  L G++AVSLA P  +GG++D+ +  + ++ P + AG +  +F  QSV++A  R S++ ++GER+AARLR+  F A+  Q+ A+FDR+RTGD++NRL +DV +VQ S+T + A GLRN  + VG   ML +++P LA VS+   PP+A    + G  +KK+Q  VQEAL  ++ VAEE
Sbjct:   19 RLVSLARPEAARFAFVLASLLGTSAVSLAFPAAIGGVLDSAVAQSTSWTPWQVAGGMAALFAAQSVLMAV-RGSVLKISGERIAARLRQALFDAIMRQDVAWFDRHRTGDVMNRLTADVQMVQNSLTNNIAMGLRNAFVGVGGVVMLVHMAPTLAAVSLVAIPPIALGWRYGGNIIKKRQLAVQEALGDTANVAEE 213
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14681.2796.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK61_ECTSI2.860e-9779.81Efflux ABC transporter, permease/ATP-binding prote... [more]
A0A835ZGY2_9STRA7.590e-6261.34Efflux ABC transporter n=1 Tax=Tribonema minus Tax... [more]
F2UC12_SALR52.460e-4342.72ABC protein n=1 Tax=Salpingoeca rosetta (strain AT... [more]
A0A7S0THF0_HEMAN2.630e-4043.65Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S1GV67_HEMAN3.220e-4043.65Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S4F061_CHRCT1.400e-3944.85Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
A0A6L2Q6I2_COPFO2.800e-3944.55Uncharacterized protein n=1 Tax=Coptotermes formos... [more]
A0A2R5G1M6_9STRA5.340e-3943.35ABC transporter ATP-binding protein n=1 Tax=Hondae... [more]
UPI0018859ED41.660e-3842.72ATP-binding cassette sub-family B member 10, mitoc... [more]
A0A7S1CN48_9STRA2.180e-3843.37Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14681contigH-paniculata_contig14681:820..6120 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score302.0
Seed ortholog evalue2.1e-79
Seed eggNOG ortholog2880.D7FK61
KEGG koko:K05657
KEGG TC3.A.1.201
KEGG Pathwayko02010,map02010
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.ATPase activity, coupled to transmembrane movement of substances
EggNOG OGsCOG1132@1,KOG0058@2759
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Exons5
Model size624
Cds size609
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14681.2796.1prot_H-paniculata_contig14681.2796.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig14681 835..6120 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929168.3838854-UTR-H-paniculata_contig14681:819..8341622929168.3838854-UTR-H-paniculata_contig14681:819..834Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14681 820..834 +
1691480758.0660367-UTR-H-paniculata_contig14681:819..8341691480758.0660367-UTR-H-paniculata_contig14681:819..834Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14681 820..834 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929168.3937066-CDS-H-paniculata_contig14681:834..9761622929168.3937066-CDS-H-paniculata_contig14681:834..976Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14681 835..976 +
1691480758.0754664-CDS-H-paniculata_contig14681:834..9761691480758.0754664-CDS-H-paniculata_contig14681:834..976Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14681 835..976 +
1622929168.4026413-CDS-H-paniculata_contig14681:2220..22961622929168.4026413-CDS-H-paniculata_contig14681:2220..2296Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14681 2221..2296 +
1691480758.083019-CDS-H-paniculata_contig14681:2220..22961691480758.083019-CDS-H-paniculata_contig14681:2220..2296Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14681 2221..2296 +
1622929168.4163587-CDS-H-paniculata_contig14681:2928..30361622929168.4163587-CDS-H-paniculata_contig14681:2928..3036Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14681 2929..3036 +
1691480758.0906296-CDS-H-paniculata_contig14681:2928..30361691480758.0906296-CDS-H-paniculata_contig14681:2928..3036Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14681 2929..3036 +
1622929168.4295824-CDS-H-paniculata_contig14681:4626..47021622929168.4295824-CDS-H-paniculata_contig14681:4626..4702Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14681 4627..4702 +
1691480758.0979338-CDS-H-paniculata_contig14681:4626..47021691480758.0979338-CDS-H-paniculata_contig14681:4626..4702Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14681 4627..4702 +
1622929168.4444096-CDS-H-paniculata_contig14681:5913..61201622929168.4444096-CDS-H-paniculata_contig14681:5913..6120Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14681 5914..6120 +
1691480758.1063118-CDS-H-paniculata_contig14681:5913..61201691480758.1063118-CDS-H-paniculata_contig14681:5913..6120Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14681 5914..6120 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig14681.2796.1

>prot_H-paniculata_contig14681.2796.1 ID=prot_H-paniculata_contig14681.2796.1|Name=mRNA_H-paniculata_contig14681.2796.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=203bp
MRRILELARPERFLIGGAIGLLCGSTAVSLAVPKVMGGLIDAVMQNTGTY
GPMEAAGILMTMFGMQSVMLASSRSSLMAVAGERVAARLREKAFGAMAVQ
ETAFFDRNRTGDLVNRLASDVLLVQGSVTTSAAQGLRNMLMVVGCTGMLA
YLSPQLAVVSVAIFPPVAGIGVWFGRRMKKQQKGVQEALAASSAVAEEVR
QNF
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mRNA from alignment at H-paniculata_contig14681:820..6120+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig14681.2796.1 ID=mRNA_H-paniculata_contig14681.2796.1|Name=mRNA_H-paniculata_contig14681.2796.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5301bp|location=Sequence derived from alignment at H-paniculata_contig14681:820..6120+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCTCTGATTGGTCAAATGCGGCGAATTCTGGAGTTGGCCCGACCGGAACG
TTTTCTGATTGGTGGAGCTATCGGCTTGTTGTGTGGCTCGACTGCCGTCT
CCCTGGCGGTTCCAAAGGTTATGGGTGGACTCATCGACGCAGTCATGCAG
AACACAGGTAGCGTGGCTGTTGTGCGGGCTCAATTTTACCGGTAGTTGCC
AAAGCTTTGGTCTGGGGAGAAGTGGAGATAAATCCATCGTTTTCCTATTG
GTTCAATGACGATAAAGAGACGACGAGAAAGGAAGCCCGTCGTTCTCTGA
TTGACCAAGCGTCGTCGAACGGGGTCCACCTTTTTCGAGTTTTTCATTAT
TTCGTGGTTTAACGCCATTGAATATGTTCTCTCGTTGAGAAAGACGATTC
TTTGTGGTGGGGATGGTGCTTTTTGTTTTTCTTTTTTTTTTTTGTGAAAG
TTCTCGTGCACTGGTTATCTTCGCACGCACTTTCTAGAAGGAGGAAACTT
ACCGCCGAACCGCACATGACAGTACGATGCTCCCAGGAGAGACTGGCTCT
CGAGGGGACATTGCGTGCTCGAGGGATTGGTTTTATATCTTGGGCTGTAT
GTAGTTGGGAGCATGCATTTCGCTTCTTTTTTTTTCTAATTTTTATACAC
TCATCTTAGCGTCGGCAGCAGCTAGAAGAGCTCTTCTGAATATTTGACAA
AACGCCACTGGTTGTTGTGTAGGGGATCGGGGTTCAGGCACCCCCGAAAC
GTCAGGATCGTTCCTGCTCTCCCCGTTGTGTTCGAGTGAGTTGAGCAAAT
TCGCCCCGTCTTGGTGGCCGCTGATCGACCAGTACATGAGACATATCGAC
AAGCACAAGGTAAAACACTGAACGCTTGACAAATGCTTGCTTTGATATGT
ATGTCCTTCTACATACCTTTATGCGTCTCCGTGAACGAACGCTGTTTCTT
TTACCAAGTACCTGATTGCGTTGACGAAAATCACTGGGTGAAACGGTCAG
TCGTATCGTGGGTCAAATATGGACGCGCGAGGTCATATCTGACGATTTGC
CCAACTTTTGAATCGTTTGAACAAGCTCCTGACTACCACCAAGCCAAGGC
GTGCATATTGCAAACACCCTAGCCCCTGGTTCGGCCGAACCGGGGTGGTG
CCTACCCCGCAGAGGAATAAATAACTCTCTTCTGTTGAAGGAAACTAGAC
ATGCTTTGGTAAAATACCTGAGTATGGAAGCAGCGGTAAAGTTTTTGCCT
CAGCCTTCCGGGGGTTAAACACACACACACACACACACACACACACACAC
ACACCCTAGCCCCTCCCACCACCACCGCTCCAACGCCGTCTTCTCTCCCT
GCCCTGGGCAAATGTTTCCTGGTTTTCGCTTTGCTCGAAACGATACTCCA
GGCACGTACGGCCCTATGGAAGCAGCCGGAATCCTTATGACAATGTTCGG
GATGCAGAGCGTCATGCTCGCCTCCAGGTATTTCTGTGCGCAAACGATTG
ACCAATAGGAGAACGTTTTCCCTTATAGATACCAAATACCGTCTCTTGCA
TTGCGGCCTCGAATTTTTTTTTTCACATGCGGTGGGTTATTTGTTGCCGG
GGACGGGGTCGCATTCGCGCCGGGGGGGGGGGGGGGAGAGAGGCACTGCT
GTGTACCTCTTTTACCTCTCCCCTCCAGGAACACTGTTAGTTTTCGAGGC
ATCATGGCGTACTATGCTTTTCCGCGGAGCAGCTATCGAATATTGTAGAC
ATATAAACAATGCCAGGTGTTGCTAGTTATAACATGGATGGGACACGGTT
CCATTACCAATGGTTGAACATCAATCAATCGTTGATTTGAGTTGAGATCT
TGACCGTTCAGGATACTGAGTCAAGCGGGGGTACGTGTACGAATATTTAT
AGGCAGACGTTTGGTGTTAGATATCAAGAGCCACTCGATGAGTTATGATG
CACTAGTAACCACTCTGCGAAGCAAGCTCTTCTGGTGCCTCTTGCCTCTA
CTGCAGCTGCGAAGCTGTCTTGTTCTCTGACTGCTAACTACCGACTTTCT
GCGTTGAGCCTGACGAGCAGTTGTTCCCCCGCCACTTTGGTTTCTTCGTT
TTCCTTGAGCAGGTCTAGTCTCATGGCCGTCGCGGGCGAACGAGTAGCAG
CGAGACTGAGGGAAAAGGCGTTCGGTGCCATGGCCGTCCAAGAGACGGCC
TTTTTCGACCGAAATAGGTAATACTACTCTTTTGGCAACATTAGGGGTGG
CGCGGGTGCTTTGCAGACCCCGCGGGGGGTGAAAGGAGGGGGTAGTAGCG
AGTTATATCTCTCTTCCAACTTTATTACCAAGGGAATCTCGAACTTTTTT
TTTTTAGCTTGCTGCTGACCGGGGATGTTTGCTATGTTTAGTTAGACCGC
GGGGATGGAGAGTGGATAAGCTAGCAATGAACACTGGCACGAGCATTTTT
TTTTTTTTTTCCTTGGAGGAGAGGAGGAAACCTTTGCCCAACACGTACCC
CGATATTCGAGTTCGTGTGTCGGTTGCCCGAAGGTCCGACTAGACAACGT
TGTGGCTGTTATGTGGGGAAGGCACCCTGAGCGTTCGCCCGCCCTTTGCT
CAGGGTAGGTAGTGTGGGACTTGCACCCACTAAAACCCCCTATGTTGTTC
CCCTCCATTTGGTGCAGTACACGCACCGCCCTGCTCAGTGAGCTTCGGCC
CTAGGACTGATACGAACACACACCGAATTTACGAACCCTCACCAGCTGGT
CAACCCGTTTATGAGGTTTTTCACAATCTATGATAACTTTAGGCGTACGT
ATCCCATGCTGAGGTGAGATAGCCCGCAATCATGGCTGCGACTCATGAGC
AACGTACAATCAACAAGAATGCGGAAGGAGAGGGGAGGGGGGTGTGGCAA
AGAGATGGATCACTTACAGTAAAAAACATGGCAATAACCGTAAAACGAAG
TGAAAGTATGCCCAGCATCTTAAAGCTGATGGTTACTTGCTTCTTATCCA
CAATCTGACCAATCTGGGGGAGTGGACAAAGTGTGGTGTGCTTGACTTAC
GCTGGAGGCTCCAGTCTAGAAGATCGACCCCACCGGGCTCCGCTGCTCCT
GGAAGATTCGCTCCTCAAATCACTGGAATGTGTTGGGAAGCACTGTTCAT
GTGCACGAGGTTCGGTTGACTGATGAGACCTTCGGCAGCAAGAAATCAAG
CGTGGATGGCCAAGAGAGATGCTCCCTAGTATGTCTATGTGCTGAACATG
TGTGGCGGTGTATCGTGCTACCCTGAGTGATGCAAAGGTATCCCGCATGG
TACTTGCCGAGTGTACGTTGGCAATTTACCGTACTATGGCTGTCCTCTCT
TTGAACTCGAAATTTTTCGTTCTAAAAAAAGAGTACGCGTACACTGTGGG
AAGAGCTTGTTGATCTAATTACAGATGGTTGATCTTAACGGGAGATCTAA
TCCAGTAACGATGCTTACATACACCCGTTTCGATCAGAAAAAAGTCGAGC
TTAAAAAAAAAAAAAAAGTTGTATGACCCCGGGTGTTGATGTGATACACT
CTATAGGCTGCGAATACTGCACCGGTGTTTATTTTTTTATAGATCCGGTC
ACAGGGTACCAATATTCCCTTGCGTGTACTCAGAGCCTTTTTTTTTTTTT
TTACCAAGTTCAATTTATGGTGGCGCCCATGACGAGCCTAACATGGTTCT
GTGGGGTCGTGGATGATGATTGGCGTTGGAGGCAACAGTACTGAGCACAC
CTCCCCCTTCCCTCCGCTGTTCCCGTGTTGCCGTGCTGTTGGCTTGGTGC
TCGGTAGGACCGGTGACCTGGTTAATCGATTGGCGAGCGATGTGCTGCTG
GTCCAGGGCAGCGTTACTACAAGCGCAGCACAGGTGTGCGAACACGAATG
CAGTTATTTACAAGCTACAGATGACGATTCAATTCTTAGCGTGTCAGCTG
ATGGGAGTCGGAAATGAAAAAACGCTGCTGCAGCTGCTGCCTGCTCGCGT
TGTTGCCTTTCACGAATGATTTTCGTTGTCCTCTACGCCGTTGCTGCTGC
ATGTCGCACCCGTTGTTGACCTATTTTTGTTACGTGTCGTGTGAGTTGTT
GCGATGGTGCGTGATGCCCCCTCGCTACATACAAGTACACGTTCTTCCCC
CCGCATGGTAGCGAAGCCTGTCCCGGCAGCTGGGTTATTCAGTCGTATAC
TCGAGTATGATGCTATCGACTGGACTACTTCACCTTGATTTTGAGTCTTG
CCCGCAAACCGGACCTTACATTGTTCCTCCCCTGCTGCCTGGGCCGTCGT
GGGCTTGTGTAAGGCGGATCGTTTCGTGTGACGAAGCTGACCGGTCGTGT
TCGTTTTCCAGAAGATAGTTAGTTTCCCACGCAGTGCAGACCAGCTAGGC
TACTTTACAACGTGGTAAAAGGTACCTCCCTCCCATGTAGAATTAGGAAC
CGACTAAGAAGATCGAGAACCGGTTCGCTGATATACCCAAATTATGGGTT
CGGAAAAAGAATTTTAACCGGATTTTTTTGGGCCGGCACCCAACTCTGCT
TCCACCCCAACCGCGTTCCCTAGTCTTTCCGTCGCTGGCAGAAGGAACTC
GCTGTCGATACCTCAATATATTATGATGCATAGCATCCATACCAAGCTCC
GCGCCTTGGACCCCACAACCGTTTCACATGCTAGCTCTGAGAGATGTTTG
AGGTAGTCTTTCCGCCGAAGATTCAGTGTGCTTCACTCTCCTCTCCCCCC
AGACCTTTTCCTCCTCCTCTCGAGGACGCGTGGTCAATAGTCAAAATATG
AGTACGCCCCCCCCCCGTCCTCCCCTCCCCCCGATGTAGGGATAAAGTTG
TAAGTTGTACAAGACTGAACAGTTATGTTTGATATGGAGTGTATATATAT
ATATATATATATATATTACCCAAAGTTTAATTCGTTTGTTGTAGTGGCAT
CAATCCATGTAAGTGACGGTACTATTTTTTCATCGAGTCAGTTTTATGAT
GACGTGGACGTGATGACAGGCGGGGTGGAGCTCTTCTTTCGCTACACTAC
ACGACCTTCAACCCACACTGACTGTTACGTGTTGCTCTATTCAGGGCTTG
CGAAATATGCTGATGGTGGTGGGATGTACGGGGATGTTGGCGTACCTATC
GCCGCAGCTGGCAGTCGTAAGCGTGGCGATTTTCCCACCCGTGGCAGGTA
TAGGTGTCTGGTTCGGGCGCAGGATGAAAAAACAGCAAAAGGGGGTTCAG
GAGGCGCTGGCCGCCAGCAGCGCCGTGGCGGAAGAGGTTCGCCAGAATTT
T
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Coding sequence (CDS) from alignment at H-paniculata_contig14681:820..6120+

>mRNA_H-paniculata_contig14681.2796.1 ID=mRNA_H-paniculata_contig14681.2796.1|Name=mRNA_H-paniculata_contig14681.2796.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1218bp|location=Sequence derived from alignment at H-paniculata_contig14681:820..6120+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGGCGAATTCTGGAGTTGGCCCGACCGGAACGTTTTCTGATTGGTGG
AGCTATCGGCTTGTTGTGTGGCTCGACTGCCGTCTCCCTGGCGGTTCCAA
AGGTTATGGGTGGACTCATCGACGCAGTCATGCAGAACACAGATGCGGCG
AATTCTGGAGTTGGCCCGACCGGAACGTTTTCTGATTGGTGGAGCTATCG
GCTTGTTGTGTGGCTCGACTGCCGTCTCCCTGGCGGTTCCAAAGGTTATG
GGTGGACTCATCGACGCAGTCATGCAGAACACAGGCACGTACGGCCCTAT
GGAAGCAGCCGGAATCCTTATGACAATGTTCGGGATGCAGAGCGTCATGC
TCGCCTCCAGGCACGTACGGCCCTATGGAAGCAGCCGGAATCCTTATGAC
AATGTTCGGGATGCAGAGCGTCATGCTCGCCTCCAGCAGGTCTAGTCTCA
TGGCCGTCGCGGGCGAACGAGTAGCAGCGAGACTGAGGGAAAAGGCGTTC
GGTGCCATGGCCGTCCAAGAGACGGCCTTTTTCGACCGAAATAGCAGGTC
TAGTCTCATGGCCGTCGCGGGCGAACGAGTAGCAGCGAGACTGAGGGAAA
AGGCGTTCGGTGCCATGGCCGTCCAAGAGACGGCCTTTTTCGACCGAAAT
AGGACCGGTGACCTGGTTAATCGATTGGCGAGCGATGTGCTGCTGGTCCA
GGGCAGCGTTACTACAAGCGCAGCACAGGACCGGTGACCTGGTTAATCGA
TTGGCGAGCGATGTGCTGCTGGTCCAGGGCAGCGTTACTACAAGCGCAGC
ACAGGGCTTGCGAAATATGCTGATGGTGGTGGGATGTACGGGGATGTTGG
CGTACCTATCGCCGCAGCTGGCAGTCGTAAGCGTGGCGATTTTCCCACCC
GTGGCAGGTATAGGTGTCTGGTTCGGGCGCAGGATGAAAAAACAGCAAAA
GGGGGTTCAGGAGGCGCTGGCCGCCAGCAGCGCCGTGGCGGAAGAGGTTC
GCCAGAATTTTGGCTTGCGAAATATGCTGATGGTGGTGGGATGTACGGGG
ATGTTGGCGTACCTATCGCCGCAGCTGGCAGTCGTAAGCGTGGCGATTTT
CCCACCCGTGGCAGGTATAGGTGTCTGGTTCGGGCGCAGGATGAAAAAAC
AGCAAAAGGGGGTTCAGGAGGCGCTGGCCGCCAGCAGCGCCGTGGCGGAA
GAGGTTCGCCAGAATTTT
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