prot_H-paniculata_contig14680.2795.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14680.2795.1
Unique Nameprot_H-paniculata_contig14680.2795.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length159
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14680.2795.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 3..19
e-value: 0.0012
score: 28.1
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 2..18
e-value: 4.8E-5
score: 23.2
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 2..19
score: 9.834
NoneNo IPR availableGENE3D4.10.60.10coord: 1..59
e-value: 3.9E-5
score: 25.4
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 2..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14680contigH-paniculata_contig14680:4091..4567 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14680.2795.1mRNA_H-paniculata_contig14680.2795.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14680 4091..4568 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14680.2795.1 ID=prot_H-paniculata_contig14680.2795.1|Name=mRNA_H-paniculata_contig14680.2795.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=159bp
KRKCHSCGKVGHVLRDCRSKTKTNNGKRSSKWCSLHNTHLHDNSECRDEN
KQQNKKWCSLHISPHHDNSECRNQQDNQRNTSSNGNQSSNSNFTQHGQHQ
QSSPPYQANTAIDPTATTEPPAYNTPTAFSASITQLSTTTAPSTSPPPPG
IGFSFITEE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf