prot_H-paniculata_contig14671.2792.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14671.2792.1
Unique Nameprot_H-paniculata_contig14671.2792.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length83
Homology
BLAST of mRNA_H-paniculata_contig14671.2792.1 vs. uniprot
Match: A0A6H5JP19_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP19_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 3.360e-9
Identity = 34/83 (40.96%), Postives = 50/83 (60.24%), Query Frame = 0
Query:    2 FWRTYGTQNIRLLSEVARNVLGAPASSASLEQDFGEAGRLINR-RGSLDPACVEMVMFLHGVYNYIPREIPKLSNDEAKDAIP 83
            +WR +G ++   L  VA+ V G PAS+  +E+DF  A   + R R SLDPA +EM ++L   ++ IP +IPKL +     AIP
Sbjct:  530 YWRLHGKKHPFALRLVAQAVYGVPASAGVVERDFSIADLFMPRKRASLDPAYLEMQLYLRAHFDSIPMDIPKLDDASVAAAIP 612          
BLAST of mRNA_H-paniculata_contig14671.2792.1 vs. uniprot
Match: A0A2S2PJQ9_SCHGA (Putative AC transposase (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2PJQ9_SCHGA)

HSP 1 Score: 51.6 bits (122), Expect = 4.250e-6
Identity = 28/62 (45.16%), Postives = 38/62 (61.29%), Query Frame = 0
Query:    3 WRTYGTQNIRLLSEVARNVLGAPASSASLEQDFGEAGRLIN-RRGSLDPACVEMVMFLHGVY 63
            W    +    LLS++A+ +LG PASSAS E+ F  AGR+I  RR +L    V+ +MFLH  Y
Sbjct:   94 WWEQNSSRFPLLSQLAKKILGIPASSASSERCFSTAGRIIEKRRTNLKGETVDSLMFLHDHY 155          
BLAST of mRNA_H-paniculata_contig14671.2792.1 vs. uniprot
Match: G4Z7A8_PHYSP (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z7A8_PHYSP)

HSP 1 Score: 48.1 bits (113), Expect = 3.080e-5
Identity = 27/73 (36.99%), Postives = 42/73 (57.53%), Query Frame = 0
Query:   13 LLSEVARNVLGAPASSASLEQDFGEAGRLINR-RGSLDPACVEMVMFLHGVYNYIPR-EIPKLSNDEAKDAIP 83
            LL  VAR +   P+SSA +E+DFG +G+++   R S   A ++M  FLH   +++   + PKL   E  + IP
Sbjct:    3 LLPMVARILFAVPSSSAQIERDFGNSGKMVTALRASTSTANIDMACFLHQHRSFVDVCQCPKLKASEVDEHIP 75          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14671.2792.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JP19_9PHAE3.360e-940.96Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A2S2PJQ9_SCHGA4.250e-645.16Putative AC transposase (Fragment) n=1 Tax=Schizap... [more]
G4Z7A8_PHYSP3.080e-536.99Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 3..60
e-value: 1.6E-6
score: 27.8
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 2..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14671contigH-paniculata_contig14671:5407..5655 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14671.2792.1mRNA_H-paniculata_contig14671.2792.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14671 5407..5655 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14671.2792.1 ID=prot_H-paniculata_contig14671.2792.1|Name=mRNA_H-paniculata_contig14671.2792.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=83bp
TFWRTYGTQNIRLLSEVARNVLGAPASSASLEQDFGEAGRLINRRGSLDP
ACVEMVMFLHGVYNYIPREIPKLSNDEAKDAIP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_sf