mRNA_H-paniculata_contig14670.2791.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig14670.2791.1
Unique NamemRNA_H-paniculata_contig14670.2791.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig14670.2791.1 vs. uniprot
Match: A0A6H5KIM5_9PHAE (DDE_3 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIM5_9PHAE)

HSP 1 Score: 410 bits (1054), Expect = 2.350e-131
Identity = 229/440 (52.05%), Postives = 283/440 (64.32%), Query Frame = 3
Query:  609 QLYKFINDEQQAGRQVFRRTVAEWLMEHCNPYKEVSNRAVGGLLQRLGYRRRRRRRGRIKHPRWMPRGSRVFACFSLKWTLRKGQRMRGWQFLCTWMRALSTRRTVPHIHTFLLTRMGL*RMGWVARRGRAYA*LWCMQPRSGVRWLRVVAIMTFQSKRV---GLSVRKTVGESKRLRTST*QMRKQQS--FCGRSS*LRAIITRLSMTDTMFMEWLEHRLTPAFNANPEFWGKMIILVLDNASYHHGFDSEVKVPETNNKVYNIGLLRKYGAGAITVKRAAANGTVVEHRFEVPTEVGSSFPDARRAGGVSREDVALATREFFRLHYPEKLEERVETFMRQKGWELIWTPPYIPSFQPIELFWQHGKQYVSFNFQLKRKVHEMWEQIRKGWYGDPTWPG*EGGWNAADCFKLVAHAIGEINLWIKDRDGQLRGTIGNLE 1913
            QL +FINDE +AGRQVFRRTVAEW+   CN  ++ SNR+ GGLL RLGY+   RRRGRIK P            F ++  + K     G   +     +   +        F     G+ + G     G+            G+R + V AI  +        GL + +  G  K   +   +M  +++  F  ++   +      +MTD+MFMEWLEHRL+PA+NA PEF GK +ILVLDNASYHHGFD+EVKVPETN K +N+ LLR +GA +I V+R      VVE+ FEVPTE GSSFP   R GGVSR +VA ATRE+  L++PE+LEERV TFMR+KGW LIWTPPY+PSFQPIELFWQHGKQYVS NF+LKRK+ E+W QIRKGWYGD  WPG EGGW AADC KLV HAIGE+N W+KDRDG L GTIG+LE
Sbjct:  180 QLREFINDEHKAGRQVFRRTVAEWMHRTCN-MEQPSNRSAGGLLSRLGYK---RRRGRIKTPPLNAERLARIRRFLVEMVMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGK------------GLRMIMVHAITKWGPLAKLCDGLPIEE--GWFKETGSGKKEMEDEETAEFLWQAKLAKGDY-HAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLSGTIGSLE 600          
BLAST of mRNA_H-paniculata_contig14670.2791.1 vs. uniprot
Match: A0A6H5JR41_9PHAE (DDE_3 domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR41_9PHAE)

HSP 1 Score: 405 bits (1041), Expect = 2.740e-129
Identity = 231/442 (52.26%), Postives = 283/442 (64.03%), Query Frame = 3
Query:  609 QLYKFINDEQQAGRQVFRRTVAEWLMEHCNPYKEVSNRAVGGLLQRLGYRRRRRRRGRIKHPRWMPRGSRVFACFS--LKWTLRKGQRMRGWQFLCTWMRALSTRRTVPHIHTFLLTRMGL*RMGWVARRGRAYA*LWCMQPRSGVRWLRVVAIMTFQSKRV---GLSVRKTVGESKRLRTST*QMRKQQS--FCGRSS*LRAIITRLSMTDTMFMEWLEHRLTPAFNANPEFWGKMIILVLDNASYHHGFDSEVKVPETNNKVYNIGLLRKYGAGAITVKRAAANGTVVEHRFEVPTEVGSSFPDARRAGGVSREDVALATREFFRLHYPEKLEERVETFMRQKGWELIWTPPYIPSFQPIELFWQHGKQYVSFNFQLKRKVHEMWEQIRKGWYGDPTWPG*EGGWNAADCFKLVAHAIGEINLWIKDRDGQLRGTIGNLE 1913
            QL +FINDE +AGRQVFRRTVAEW+   CN  ++ SNR+ GGLL RLGY+   RRRGRIK P   P  +   A     L   + K     G   +     +   +        F     G+ + G     G+            G+R + V AI  +        GL + +  G  K   +   +M  +++  F  ++   +      +MTD+MFMEWLEHRL+PA+NA PEF GK +ILVLDNASYHHGF SEVKVPETN K +N+ LLR +GA +I V+R      VVE+ FEVPTE GSSFP   R GGVSR +VA ATRE+  L++PE+LEERV TFMR+KGW LIWTPPY+PSFQPIELFWQHGKQYVS NF+LKRK+ E+W QIRKGWYGD  WPG EGGW AADC KLV HAIGE+N W+KDRDG L GTIG+LE
Sbjct:  191 QLREFINDEHKAGRQVFRRTVAEWMHRTCN-MEQPSNRSAGGLLSRLGYK---RRRGRIKTP---PLNAERLARIRRFLVMNMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGK------------GLRMIMVHAITKWGPLAKLCDGLPIEE--GWFKETGSGKKEMEDEETAEFLWQAKLAKGDY-HAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFVSEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLSGTIGSLE 610          
BLAST of mRNA_H-paniculata_contig14670.2791.1 vs. uniprot
Match: D8LNM6_ECTSI (DDE_3 domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LNM6_ECTSI)

HSP 1 Score: 404 bits (1038), Expect = 1.530e-128
Identity = 222/435 (51.03%), Postives = 271/435 (62.30%), Query Frame = 3
Query:  609 QLYKFINDEQQAGRQVFRRTVAEWLMEHCNPYKEVSNRAVGGLLQRLGYRRRRRRRGRIKHPRWMPRGSRVFACFSLKWTLRKGQRMRGWQFLCTWMRALSTRRTVPHIHTFLLTRMGL*RMGWVARRGRAYA*LWCMQPRSGVRWLRVVAIMTFQSKRVGLSVRKTVGESKRLRTST*QMRKQQSFCGRSS*LRAIITRLSMTDTMFMEWLEHRLTPAFNANPEFWGKMIILVLDNASYHHGFDSEVKVPETNNKVYNIGLLRKYGAGAITVKRAAANGTVVEHRFEVPTEVGSSFPDARRAGGVSREDVALATREFFRLHYPEKLEERVETFMRQKGWELIWTPPYIPSFQPIELFWQHGKQYVSFNFQLKRKVHEMWEQIRKGWYGDPTWPG*EGGWNAADCFKLVAHAIGEINLWIKDRDGQLRGTIGNLE 1913
            QL +FINDE +AGRQVFRRTVAEW+   CN  ++ SNR+VGGLL RLGY+   RRRGRIK P            F ++  + K     G   +     +   +        F     G+ + G     G+    L  +   +  +W  +           G       G+ K     T +   Q                 +MTD+MFMEWLEHRL+PA+NA PEF GK +ILVLDNASYHHGFD+EVKVPETN K +N+ LLRK+GA +I VKR       VEH FEVP+E GSSFP   R GGVSR +VA ATRE+ RL+YPE+LEERV TFM++KGW LIWTPPY+PSFQPIELFWQHGKQYVS NF+LKRK+ E+W QIR+GWYGD  W G EGGW AA+C KLV HAIGE+N W++DRD  L G IGNL+
Sbjct:  214 QLREFINDEHKAGRQVFRRTVAEWVHRTCN-MEQPSNRSVGGLLSRLGYK---RRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDENGVVQDGIGRTTGKG---LRMIMVHAITKWGPLAKFCDGFPIEEGWFKETGSGKKKMEDEETAEFLWQAKLAKGDY-------HAAMTDSMFMEWLEHRLSPAYNAIPEFEGKKMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRKFGAKSIRVKRKEGEQGFVEHNFEVPSEPGSSFPAGNREGGVSRAEVATATREYIRLNYPERLEERVVTFMKKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRQGWYGDKEWSGQEGGWKAANCSKLVEHAIGEMNKWVRDRDAGLSGKIGNLQ 634          
BLAST of mRNA_H-paniculata_contig14670.2791.1 vs. uniprot
Match: A0A6H5KDX7_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX7_9PHAE)

HSP 1 Score: 387 bits (994), Expect = 1.630e-124
Identity = 217/429 (50.58%), Postives = 272/429 (63.40%), Query Frame = 3
Query:  609 QLYKFINDEQQAGRQVFRRTVAEWLMEHCNPYKEVSNRAVGGLLQRLGYRRRRRRRGRIKHPRWMPRGSRVFACFSLKWTLRKGQRMRGWQFLCTWMRALSTRRTVPHIHTFLLTRMGL*RMGWVARRGRAYA*LWCMQPRSGVRWLRVVAIMTFQSKRV---GLSVRKTVGESKRLRTST*QMRKQQS--FCGRSS*LRAIITRLSMTDTMFMEWLEHRLTPAFNANPEFWGKMIILVLDNASYHHGFDSEVKVPETNNKVYNIGLLRKYGAGAITVKRAAANGTVVEHRFEVPTEVGSSFPDARRAGGVSREDVALATREFFRLHYPEKLEERVETFMRQKGWELIWTPPYIPSFQPIELFWQHGKQYVSFNFQLKRKVHEMWEQIRKGWYGDPTWPG*EGGWNAADCFKLVAHAIGEINLWIKDRD 1880
            QL +FINDE +AGRQVFRRTVAEW+   CN  ++ SNR+ GGLL RLGY+   RRRGRIK P            F ++  + K     G   +     +   +        F     G+ + G     G+            G+R + V AI  +        GL + +  G  K   +   +M  +++  F  ++   +      +MTD+MFMEWLEHRL+PA+NA PEF GK +ILVLDNASYHHGFD+EVKVPE+N K +N+ LLR +GA +I V+R      VVE+  EVPTE GSSFP   R GGVSR +VA ATRE+  L++PE+LEERV TFMR+KGW LIWTPPY+PSFQPIELFWQHGKQYVS  F+LKRK+ E+W QIRKGWYGD  WPG EGGW AA+C KLV HAIGE+N W+KDRD
Sbjct:   63 QLREFINDEHKAGRQVFRRTVAEWMHRTCN-MEQPSNRSAGGLLSRLGYK---RRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGK------------GLRMIMVHAITKWGPLAKLCDGLPIEE--GWFKETGSGKKEMEDEETAEFLWQAKLAKGDY-HAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPESNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNLEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLKFELKRKMREVWVQIRKGWYGDKAWPGQEGGWKAANCSKLVDHAIGEMNKWVKDRD 472          
BLAST of mRNA_H-paniculata_contig14670.2791.1 vs. uniprot
Match: A0A6H5K024_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K024_9PHAE)

HSP 1 Score: 389 bits (998), Expect = 2.550e-124
Identity = 220/444 (49.55%), Postives = 263/444 (59.23%), Query Frame = 3
Query:  609 QLYKFINDEQQAGRQVFRRTVAEWLMEHCNPYKEVSNRAVGGLLQRLGYRRRRRRRGRIKHPRWMPRGSRVFACFSLKWTLRKGQRMRGWQF-------LCTWMRALSTRRTVPHIHTFLLTRMGL*RMGWVARRGRAYA*LWCMQPRSGVRWLRVVAIMTFQSKRVGLSVRKTVGESKRLRTST*QMRKQQS--FCGRSS*LRAIITRLSMTDTMFMEWLEHRLTPAFNANPEFWGKMIILVLDNASYHHGFDSEVKVPETNNKVYNIGLLRKYGAGAITVKRAAANGTVVEHRFEVPTEVGSSFPDARRAGGVSREDVALATREFFRLHYPEKLEERVETFMRQKGWELIWTPPYIPSFQPIELFWQHGKQYVSFNFQLKRKVHEMWEQIRKGWYGDPTWPG*EGGWNAADCFKLVAHAIGEINLWIKDRDGQLRGTIGNLE 1913
            QL +FINDE +AGRQVFRRTVAEW+   CN  ++ SNR+ GGLL RLGY+   RRRGRIK P            F ++  + KG    G                                                                              GL + +  G  K   +   +M  +++  F       +      +MTD+MFMEWLEHRL+PA+NA PEF GK +ILVLDNASYHHGFD+EVKVPETN K +N+ LLR +GA +I V+R      VVE+  EVPTE GSSFP   R GGVSR +VA ATRE+  L++PE+LEERV TFMR+KGW LIWTPPY+PSFQPIELFWQHGKQYVS NF+LKRK+ E+W QIRKGWYGD  WPG EGGW AADC KLV HAIGE+N W+KDRDG L GTIG+LE
Sbjct:   63 QLREFINDEHKAGRQVFRRTVAEWMHRTCN-MEQPSNRSAGGLLSRLGYK---RRRGRIKTPPLNAERLARIRRFLVEMVMAKGAEDAGLMVPPILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDGLPIEE--GWFKETGSGKKEMEDEETAEFLCHFKFAKGD-HHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNLEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLSGTIGSLE 499          
BLAST of mRNA_H-paniculata_contig14670.2791.1 vs. uniprot
Match: A0A6H5KHE7_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHE7_9PHAE)

HSP 1 Score: 359 bits (922), Expect = 2.420e-115
Identity = 166/234 (70.94%), Postives = 192/234 (82.05%), Query Frame = 3
Query: 1212 SMTDTMFMEWLEHRLTPAFNANPEFWGKMIILVLDNASYHHGFDSEVKVPETNNKVYNIGLLRKYGAGAITVKRAAANGTVVEHRFEVPTEVGSSFPDARRAGGVSREDVALATREFFRLHYPEKLEERVETFMRQKGWELIWTPPYIPSFQPIELFWQHGKQYVSFNFQLKRKVHEMWEQIRKGWYGDPTWPG*EGGWNAADCFKLVAHAIGEINLWIKDRDGQLRGTIGNLE 1913
            +MTD+MFMEWLEHRL PA+NA PEF GK +ILVLDNASYHHGFD++VK+PE+N K +N+ LLR +GA +I VKR      V  + FEVPTE GSSFP   R GGVSR +VA ATRE+  L++PE+LEERV TFMR+KGW LIWTPPY+PSFQPIELFWQHGKQYVS NF+LKRK+ E+W QIRKGWYGD  WPG EGGW AADC KLV HAIGE+N W+KDRDG L GTIG+LE
Sbjct:   97 AMTDSMFMEWLEHRLNPAYNAIPEFKGKRMILVLDNASYHHGFDAQVKLPESNTKKHNVDLLRMFGAKSIRVKRKEGEQGV--YNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLSGTIGSLE 328          
BLAST of mRNA_H-paniculata_contig14670.2791.1 vs. uniprot
Match: A0A6H5KKL0_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKL0_9PHAE)

HSP 1 Score: 335 bits (860), Expect = 1.060e-104
Identity = 199/404 (49.26%), Postives = 247/404 (61.14%), Query Frame = 3
Query:  609 QLYKFINDEQQAGRQVFRRTVAEWLMEHCNPYKEVSNRAVGGLLQRLGYRRRRRRRGRIKHPRWMPRGSRVFACFSLKWTLRKGQRMRGWQFLCTWMRALSTRRTVPHIHTFLLTRMGL*RMGWVARRGRAYA*LWCMQPRSGVRWLRVVAIMTFQSKRVGLSVR----KTVGESKRLRTST*QMRKQQS--FCGRSS*LRAIITRLSMTDTMFMEWLEHRLTPAFNANPEFWGKMIILVLDNASYHHGFDSEVKVPETNNKVYNIGLLRKYGAGAITVKRAAANGTVVEHRFEVPTEVGSSFPDARRAGGVSREDVALATREFFRLHYPEKLEERVETFMRQKGWELIWTPPYIPSFQPIELFWQHGKQYVSFNFQLKRKVHEMWEQIRKGWYGDPTWPG*EG 1802
            QL +FINDE +AGRQVFRRTVAEW+   CN  ++ SNR+  GLL RLGY+    RRGRIK P            F ++  + K     G   +     +   +        F      + + G     G+    L  +   +  +W  +  +       VGL +     K  G  KR      +M  +++  F  ++   +      +MTD+MFMEWLEHRL+PA+NA PEF GK +ILVLDNASYHHGFD+EVKVPETN K +N+ LLR +GA +I VKR      VVE  FEVPTE GSSFP   R GGVSR +VA ATRE+  L++PE+LEERV TFMR+KG  LIWTPPY+PSFQPIELFWQHGKQYVS NF+LKRKV E+W QIRKGWYGD  WPG EG
Sbjct:   75 QLREFINDEHKAGRQVFRRTVAEWMHRTCN-MEQPSNRSAEGLLSRLGYK---GRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYIDGSFVHQAHGSPYSYFPADEDEVVQDGIGRTTGKG---LRVIMVHAITKWGPLAKLC------VGLPIEEGWFKETGSGKR------EMEDEETAEFLWQAKLAKGDY-HAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVKRKEGEQGVVEENFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGLALIWTPPYMPSFQPIELFWQHGKQYVSVNFELKRKVREVWVQIRKGWYGDKEWPGQEG 458          
BLAST of mRNA_H-paniculata_contig14670.2791.1 vs. uniprot
Match: A0A6H5KCN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN2_9PHAE)

HSP 1 Score: 332 bits (852), Expect = 7.500e-103
Identity = 200/446 (44.84%), Postives = 265/446 (59.42%), Query Frame = 3
Query:  612 LYKFINDEQQAGRQVFRRTVAEWLMEHCNPYKEVSNRAVGGLLQRLGYRRRRRRRGRIKHPRWMPRGSRVFACFSLKWTLRKGQRMRGWQFLCTWMRALSTRRTVPHIHTFLLTRMGL*RMGWVARRGRAYA*LWCMQPRSGVRWLRVVAIMT---FQSKRVGLSVRKTVGESKRLRT-------ST*QMRKQQS--FCGRSS*LRAIITRLSMTDTMFMEWLEHRLTPAFNANPEFWGKMIILVLDNASYHHGFDSEVKVPETNNKVYNIGLLRKYGAGAITVKRAAANGTVVEHRFEVPTEVGSSFPDARRAGGVSREDVALATREFFRLHYPEKLEERVETFMRQKGWELIWTPPYIPSFQPIELFWQHGKQYVSFNFQLKRKVHEMWEQIRKGWYGDPTWPG*EGGWNAADCFKLVAHAIGEINLWIKDRDGQLRGTIGNLE 1913
            L +FI  E +AGRQVFRRTV ++L   C+   E+SNRAVGGLLQRLG++   RRRGRIK P            F +K  L K     G   +     +   +        F     G+ + G     G+            G+R + V AI         + G  +R+   ++K  R        +  +M  +Q+  F  ++  L       +MTD MFM+WL+HRLTPAF+A  +F  K + LVLDNASYHH FD EVKVPETN+K YN+ LLRKYG  +  V R +  G   E+ FEVP +   S P+A R  GVS+E++A  TR +F+ ++P+KLEE+ ET+MR+KGW LIWTPPY+P+FQPIELFWQHGK YVS +F+  R + ++W+QIR GWYGDP W G EGGW AA+C KLV HAIG+++ WI    G L GTIG+LE
Sbjct:   60 LREFIKGEHEAGRQVFRRTVKDYL--ECSFGLEMSNRAVGGLLQRLGFK---RRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGVAVIVYIDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGK------------GLRMIMVHAITKHGPLAELQEGFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAK-LATGDYHNAMTDGMFMQWLKHRLTPAFDA--QFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRES-EGKAAEYNFEVPAQ--GSLPNANRKNGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNILDVWKQIRLGWYGDPEWDGQEGGWKAANCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLE 482          
BLAST of mRNA_H-paniculata_contig14670.2791.1 vs. uniprot
Match: A0A6H5JZ34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ34_9PHAE)

HSP 1 Score: 321 bits (822), Expect = 7.530e-102
Identity = 151/232 (65.09%), Postives = 176/232 (75.86%), Query Frame = 3
Query: 1215 MTDTMFMEWLEHRLTPAFNANPEFWGKMIILVLDNASYHHGFDSEVKVPETNNKVYNIGLLRKYGAGAITVKRAAANGTVVEHRFEVPTEVGSSFPDARRAGGVSREDVALATREFFRLHYPEKLEERVETFMRQKGWELIWTPPYIPSFQPIELFWQHGKQYVSFNFQLKRKVHEMWEQIRKGWYGDPTWPG*EGGWNAADCFKLVAHAIGEINLWIKDRDGQLRGTIGNL 1910
            MTD+MFMEWLEHRL P +N  PEF GK IIL+LDNASYHHGFD+EVKVPE+N K +N+ LLR +GA +I VKR      VVE+ FEVPTE GSSFP   R GGVSR  VA ATRE+  L++PE+LE+RV   +         TPPY+PSFQPIELFWQHGKQYVS  F+LKRK+ E+W  IRKGWYGD  WPG EGGW AA+C KLV HA+ E+N W+KDRDG L GTIG+L
Sbjct:    1 MTDSMFMEWLEHRLNPGYNTIPEFKGKRIILILDNASYHHGFDAEVKVPESNTKKHNVDLLRMFGAQSIRVKRKEGEQGVVEYNFEVPTEPGSSFPAGNREGGVSRAGVATATREYIHLNHPERLEQRVGGVVEYN----FETPPYMPSFQPIELFWQHGKQYVSLKFELKRKMREVWVPIRKGWYGDKEWPGQEGGWKAANCSKLVDHALREMNKWVKDRDGVLSGTIGSL 228          
BLAST of mRNA_H-paniculata_contig14670.2791.1 vs. uniprot
Match: A0A6H5KL68_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL68_9PHAE)

HSP 1 Score: 327 bits (839), Expect = 5.470e-101
Identity = 199/446 (44.62%), Postives = 262/446 (58.74%), Query Frame = 3
Query:  612 LYKFINDEQQAGRQVFRRTVAEWLMEHCNPYKEVSNRAVGGLLQRLGYRRRRRRRGRIKHPRWMPRGSRVFACFSLKWTLRKGQRMRGWQFLCTWMRALSTRRTVPHIHTFLLTRMGL*RMGWVARRGRAYA*LWCMQPRSGVRWLRVVAIMT---FQSKRVGLSVRKTVGESKRLRT-------ST*QMRKQQS--FCGRSS*LRAIITRLSMTDTMFMEWLEHRLTPAFNANPEFWGKMIILVLDNASYHHGFDSEVKVPETNNKVYNIGLLRKYGAGAITVKRAAANGTVVEHRFEVPTEVGSSFPDARRAGGVSREDVALATREFFRLHYPEKLEERVETFMRQKGWELIWTPPYIPSFQPIELFWQHGKQYVSFNFQLKRKVHEMWEQIRKGWYGDPTWPG*EGGWNAADCFKLVAHAIGEINLWIKDRDGQLRGTIGNLE 1913
            + +FI  E +AGRQVFRRTV ++L   C+   E+SNRAVGGLLQRLG++   RRRGRIK P            F +K  L K     G+ +              P   T      G+ + G     G+            GVR + V AI         + G  +R+   ++K  R        +  +M  +Q+  F  ++  L       +MTD MFM+WL+HRLTPAF+A  +F  K + LVLDNASYHH FD EVKVPETN+K YN+ LLRKYG  +  V R +  G   E+ FEVP +   S P+A R  GVS+E++A  TR +F+ ++P+KLEE+ ET+MR+KGW LIWTPPY+P+FQPIELFWQ GK YVS +F+  R + ++W+QIR GWYGD  W G EGGW AA C KLV HAIG+++ WI    G L GTIG+LE
Sbjct:   74 IREFIKGEHEAGRQVFRRTVKDYL--ECSFGLEMSNRAVGGLLQRLGFK---RRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGYSYF-------------PSDDT------GVVQDGIGRTTGK------------GVRMVMVHAITKHGPLAELQGGFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAK-LATGYYNNAMTDGMFMQWLKHRLTPAFDA--QFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRES-EGKAAEYNFEVPAQ--GSLPNANRKNGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQQGKHYVSIHFERGRNILDVWKQIRLGWYGDSEWDGQEGGWKAASCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLE 477          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14670.2791.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KIM5_9PHAE2.350e-13152.05DDE_3 domain-containing protein n=4 Tax=Ectocarpus... [more]
A0A6H5JR41_9PHAE2.740e-12952.26DDE_3 domain-containing protein n=5 Tax=Ectocarpus... [more]
D8LNM6_ECTSI1.530e-12851.03DDE_3 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5KDX7_9PHAE1.630e-12450.58DDE_3 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K024_9PHAE2.550e-12449.55DDE_3 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KHE7_9PHAE2.420e-11570.94DDE_3 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5KKL0_9PHAE1.060e-10449.26DDE_3 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5KCN2_9PHAE7.500e-10344.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZ34_9PHAE7.530e-10265.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KL68_9PHAE5.470e-10144.62Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14670contigH-paniculata_contig14670:1834..4407 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size2025
Cds size282
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14670.2791.1prot_H-paniculata_contig14670.2791.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig14670 2236..3066 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929167.539814-UTR-H-paniculata_contig14670:1833..22351622929167.539814-UTR-H-paniculata_contig14670:1833..2235Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14670 1834..2235 +
1691480757.7046258-UTR-H-paniculata_contig14670:1833..22351691480757.7046258-UTR-H-paniculata_contig14670:1833..2235Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14670 1834..2235 +
1622929167.5925837-UTR-H-paniculata_contig14670:3066..44071622929167.5925837-UTR-H-paniculata_contig14670:3066..4407Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14670 3067..4407 +
1691480757.7368538-UTR-H-paniculata_contig14670:3066..44071691480757.7368538-UTR-H-paniculata_contig14670:3066..4407Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14670 3067..4407 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929167.5579107-CDS-H-paniculata_contig14670:2235..22921622929167.5579107-CDS-H-paniculata_contig14670:2235..2292Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14670 2236..2292 +
1691480757.7157533-CDS-H-paniculata_contig14670:2235..22921691480757.7157533-CDS-H-paniculata_contig14670:2235..2292Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14670 2236..2292 +
1622929167.575559-CDS-H-paniculata_contig14670:2841..30661622929167.575559-CDS-H-paniculata_contig14670:2841..3066Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14670 2842..3066 +
1691480757.7263877-CDS-H-paniculata_contig14670:2841..30661691480757.7263877-CDS-H-paniculata_contig14670:2841..3066Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14670 2842..3066 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig14670.2791.1

>prot_H-paniculata_contig14670.2791.1 ID=prot_H-paniculata_contig14670.2791.1|Name=mRNA_H-paniculata_contig14670.2791.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=94bp
MLLFALRKDGVSENQPVLQVASTFKIGHSKVREVNKHWWDHNTLLETTGE
GRGKVTKNDDGRRHLTQDTSFTSLSTTSNKPGAKSFAVRWRSG*
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mRNA from alignment at H-paniculata_contig14670:1834..4407+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig14670.2791.1 ID=mRNA_H-paniculata_contig14670.2791.1|Name=mRNA_H-paniculata_contig14670.2791.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2574bp|location=Sequence derived from alignment at H-paniculata_contig14670:1834..4407+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACCGGTGGCGCCACTGACCGCCCGAGCAATGTGGCGAAAAGGGCTACAAC TGGTGCGCCGAGAGATGCTCAGGCTCTCGAGAGACTCAGGGTTCAGCTTG AGGAGCAGCAGGCAGCGCTAGGGGCGCTCAAGGCGGAGGTCGGGTCGAGG GAGGAAGCTGTCAAGGCGAAAGAGGCAGCGATTGCCAAGAAGGAGGCAAA CAAAGAGCGCGTCGCTGCGAAGCAGCAAGCGAAACAGCAAGCGCACGAAC AGCGAGAGCAGGAGCTCCTCGAAGCGGCTGCTCACGCCGCACAGCAGCCG AAGCTTTCACAGGCAGCCCACACCTTCATCGACGACTCTGTGGACAAGCT GAAGCCTCGAACTGGCGAGGTCTTGTGCAATGTCCAGTCGAAGCTGATTC TCATGCTGCTGTTTGCTCTTCGCAAGGACGGCGTCTCTGAGAATCAACCG GTGCTTCAGGTCAATACGAGCACAGCCAGAAAGTTTATTTAATATTGTTT TTACAAGTGTCTTTTGTATTACTTAAAGTATGCTGTGCAGCAGCAGTTTT TGCGGCATGTTAATCTGAATCACACGTCTTTTCGCGCCCTTTTCGGTGTT GCTGTTCATCACCTCTGAGTGTACAAGGTACTGCTGTCTGTACGAACACG GTTGCACTGCTGTCTGCTGTACTGTGCACACCGCTGTTCGTACGGTTCGT AACCACTGCTGTCTGTACGGTGCACACTGCTGTCCGCACAGTGCACACAG CTGCCTGTACGATTGTGCACTGCTGTGTGTACCGTACAACAGTGAGTTGG CTGTCTCCCAATCCTCACCAATGTACCCACGGCGATAACGCTGTTACGCA TGGCGCCGCATGCGCATTTTTTTCCAAGGCTGTACGCTGTTAAACTTCTG CTCTCTGTTTGCACGGTTTGAGGTGTGCTGTCTTGGCAAATGCACTGACC CGACTCACGTATGTCGATGCAATATGCGTTGCGCTCTGGACAACTGAACG TTTGCCAGGTGGCGAGCACCTTCAAGATCGGCCATTCGAAAGTCAGAGAA GTCAACAAGCACTGGTGGGACCACAACACCCTGTTGGAAACCACCGGCGA AGGAAGAGGCAAGGTCACGAAGAACGATGACGGCCGACGGCATCTCACCC AGGACACCAGCTTTACAAGTTTATCAACGACGAGCAACAAGCCGGGCGCC AAGTCTTTCGCCGTACGGTGGCGGAGTGGTTGATGGAGCACTGCAACCCA TACAAGGAGGTGTCAAACCGCGCGGTAGGAGGGTTGCTGCAGAGGCTCGG TTATAGGCGTCGTAGGCGCCGTAGGGGCAGGATCAAACACCCCCGTTGGA TGCCAAGAGGCTCGCGCGTATTCGCCTGTTTCTCGTTGAAATGGACATTG CGAAAAGGGCAGAGGATGCGGGGCTGGCAGTTCTTGTGTACATGGATGAG AGCTTTGTCCACCAGGCGCACGGTTCCGCATATTCATACTTTCCTACTGA CGAGAATGGGGTTGTAGAGGATGGGATGGGTCGCACGACGGGGAAGGGCT TACGCATGATTATGGTGCATGCAACCACGAAGTGGGGTCCGTTGGTTGCG CGTGGTAGCAATAATGACTTTCCAATCGAAGAGGGTTGGTTTAAGCGTAA GGAAAACGGTAGGGGAAAGCAAGAGGTTAAGGACTTCAACATGACAGATG AGAAAACAGCAGAGTTTCTGTGGCAGGTCAAGTTGACTAAGGGCGATTAT CACGCGGCTATCTATGACCGATACGATGTTCATGGAGTGGCTTGAACACC GCCTTACCCCAGCTTTCAACGCTAACCCTGAGTTCTGGGGCAAGATGATA ATTCTTGTTCTTGACAACGCCTCGTACCATCATGGTTTCGACTCGGAAGT CAAGGTGCCAGAAACCAATAACAAGGTGTACAATATCGGACTGTTGCGTA AGTATGGAGCGGGGGCAATCACGGTGAAGCGTGCCGCTGCCAACGGCACA GTTGTGGAGCACCGCTTCGAGGTACCAACAGAAGTTGGTTCTTCGTTCCC TGATGCGAGGCGGGCGGGCGGTGTTAGCAGAGAGGACGTAGCGTTGGCCA CTCGAGAGTTTTTCCGCCTTCACTACCCTGAAAAGCTTGAGGAGCGGGTG GAGACGTTCATGCGGCAGAAGGGGTGGGAGTTGATTTGGACACCGCCTTA CATACCGTCTTTTCAGCCGATAGAGTTGTTTTGGCAGCATGGTAAGCAGT ACGTGAGCTTCAACTTTCAGTTGAAGCGAAAAGTGCACGAGATGTGGGAG CAGATTCGCAAAGGTTGGTATGGGGACCCGACGTGGCCAGGATAGGAGGG GGGGTGGAACGCAGCCGATTGTTTCAAGTTGGTGGCGCACGCCATTGGCG AGATAAACTTGTGGATCAAGGATCGTGATGGACAGTTGCGTGGTACGATA GGTAACCTTGAAGGATCCGGACGATGTACAACGTGTGAACGAGGCCGATG ATGGGTTGGGGGAGCAGCTTGAACAGGATGATGATGAGTGGGATGTGGGG GACGGCAACGATGAGATTGAGCCA
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Coding sequence (CDS) from alignment at H-paniculata_contig14670:1834..4407+

>mRNA_H-paniculata_contig14670.2791.1 ID=mRNA_H-paniculata_contig14670.2791.1|Name=mRNA_H-paniculata_contig14670.2791.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=564bp|location=Sequence derived from alignment at H-paniculata_contig14670:1834..4407+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTGCTGTTTGCTCTTCGCAAGGACGGCGTCTCTGAGAATCAACCGGT
GCTTCAGATGCTGCTGTTTGCTCTTCGCAAGGACGGCGTCTCTGAGAATC
AACCGGTGCTTCAGGTGGCGAGCACCTTCAAGATCGGCCATTCGAAAGTC
AGAGAAGTCAACAAGCACTGGTGGGACCACAACACCCTGTTGGAAACCAC
CGGCGAAGGAAGAGGCAAGGTCACGAAGAACGATGACGGCCGACGGCATC
TCACCCAGGACACCAGCTTTACAAGTTTATCAACGACGAGCAACAAGCCG
GGCGCCAAGTCTTTCGCCGTACGGTGGCGGAGTGGTTGAGTGGCGAGCAC
CTTCAAGATCGGCCATTCGAAAGTCAGAGAAGTCAACAAGCACTGGTGGG
ACCACAACACCCTGTTGGAAACCACCGGCGAAGGAAGAGGCAAGGTCACG
AAGAACGATGACGGCCGACGGCATCTCACCCAGGACACCAGCTTTACAAG
TTTATCAACGACGAGCAACAAGCCGGGCGCCAAGTCTTTCGCCGTACGGT
GGCGGAGTGGTTGA
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