prot_H-paniculata_contig14662.2787.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14662.2787.1
Unique Nameprot_H-paniculata_contig14662.2787.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length239
Homology
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BLAST of mRNA_H-paniculata_contig14662.2787.1 vs. uniprot
Match: A0A6H5K335_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K335_9PHAE)

HSP 1 Score: 210 bits (535), Expect = 1.590e-59
Identity = 135/240 (56.25%), Postives = 159/240 (66.25%), Query Frame = 0 
Query:    1 MKEMMKAMATTAQSENTGDLDGSQAALCALFRRENLSPDRVSCAALMAQTCSTWDGLFHPKGGFRAVAERLVDSIHASGGRVLTSARVTSVLLEDGTAVGVSILPHTSKHKNXXXXXXXXXXXXXSTAVNVRI-GKG-GSVISSTGIIDTFHHLVPLSSPLP------SPVRAAAXXXXXXXXXXXXXXXXTGV-----VEPAGYRDLRAARPRVHLCVGLQGNWMEDLEGTGAYFHHVS 227
            + EMMKAM  T Q E   DL+ +QAALCA+FR ENL+P RVSCAALM QT S W GL+HP+GGFRA+AE LVDS+HASGGRVLT A+ TSV++    A GV+++      +    XXXXXXXXXX   VNV + G G GSVISS GIIDTF  L+P  SPL       S   AAA                 G      ++PAG+R LRAARPRVHLCVGLQGNW+EDL+GT +Y HHVS
Sbjct:  394 VSEMMKAMLKT-QPEGNDDLEAAQAALCAMFRSENLAPSRVSCAALMGQTSSAWGGLYHPRGGFRAIAEELVDSVHASGGRVLTRAKATSVIVGRERAEGVTVV------RESGGXXXXXXXXXXXXXVNVMVAGDGLGSVISSIGIIDTFRGLLPRKSPLTTGAASGSATTAAAGDGPAAAGKTGETVTALGEKDGEGLDPAGFRILRAARPRVHLCVGLQGNWLEDLDGTSSYVHHVS 626
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BLAST of mRNA_H-paniculata_contig14662.2787.1 vs. uniprot
Match: A0A835Z712_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z712_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 3.720e-6
Identity = 39/98 (39.80%), Postives = 50/98 (51.02%), Query Frame = 0 
Query:  129 VNVRIGKGGSVISSTGIIDTFHHLVPLSSPLPSPVRAAAXXXXXXXXXXXXXXXXTGVVEPAGYRDLRAARPRVHLCVGLQGNWMEDLEGTGAYFHHV 226
            + VR+ +GG V+S+ G I+TF  L+       S   A A                 G   PAG+  LRAARPR+HLCVGL GNW E L+ T A +  V
Sbjct:  477 LRVRVREGGCVVSALGAIETFETLL-------SDDDAKAH----------------GGRFPAGFGALRAARPRLHLCVGLAGNWDEALDATPADYLQV 551
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BLAST of mRNA_H-paniculata_contig14662.2787.1 vs. uniprot
Match: A0A1Z4L6N0_NOSLI (Uncharacterized protein n=1 Tax=Nostoc linckia NIES-25 TaxID=1091006 RepID=A0A1Z4L6N0_NOSLI)

HSP 1 Score: 57.8 bits (138), Expect = 4.540e-6
Identity = 37/105 (35.24%), Postives = 54/105 (51.43%), Query Frame = 0 
Query:   55 DGLFHPKGGFRAVAERLVDSIHASGGRVLTSARVTSVLLEDGTAVGVSILPHTSKHKNXXXXXXXXXXXXXSTAVNVRIGKGGSVISSTGIIDTFHHLVPLSSPL 159
            +G ++P GG   +A+ +V +I  SGG VLT  RVT +LL+ GTAVGV    HT+K +                  ++ I     V+S  G  +T+  L+P S PL
Sbjct:  222 NGGWYPVGGAEGIAQSIVPAIERSGGIVLTQRRVTEILLDSGTAVGVKA-QHTAKRQ---------------AEADLEIYHAPIVVSGAGAFNTYLKLIPSSYPL 310
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14662.2787.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K335_9PHAE1.590e-5956.25Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z712_9STRA3.720e-639.80Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1Z4L6N0_NOSLI4.540e-635.24Uncharacterized protein n=1 Tax=Nostoc linckia NIE... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 7..129
e-value: 8.8E-10
score: 40.7
IPR036188FAD/NAD(P)-binding domain superfamilySUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 49..179
NoneNo IPR availablePANTHERPTHR46091FAMILY NOT NAMEDcoord: 17..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14662contigH-paniculata_contig14662:3592..6514 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14662.2787.1mRNA_H-paniculata_contig14662.2787.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14662 3589..6514 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14662.2787.1 ID=prot_H-paniculata_contig14662.2787.1|Name=mRNA_H-paniculata_contig14662.2787.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=239bp
MKEMMKAMATTAQSENTGDLDGSQAALCALFRRENLSPDRVSCAALMAQT
CSTWDGLFHPKGGFRAVAERLVDSIHASGGRVLTSARVTSVLLEDGTAVG
VSILPHTSKHKNNTTSSAGSSGGGSSTAVNVRIGKGGSVISSTGIIDTFH
HLVPLSSPLPSPVRAAAGGGGVQDGKVVGGGGGTGVVEPAGYRDLRAARP
RVHLCVGLQGNWMEDLEGTGAYFHHVSSRRGRGGGGGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf