mRNA_H-paniculata_contig14651.2781.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig14651.2781.1
Unique NamemRNA_H-paniculata_contig14651.2781.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig14651.2781.1 vs. uniprot
Match: D8LKM6_ECTSI (Enoyl-CoA hydratase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM6_ECTSI)

HSP 1 Score: 338 bits (867), Expect = 4.180e-111
Identity = 166/195 (85.13%), Postives = 180/195 (92.31%), Query Frame = 1 
Query:    1 AGADIKEMACLTFAEAYGEDKFNEWARLGKIRKPLIAAVNGYALGGGCELAMMCDIILAGEKAKFGQPEITLGVIPGWGGTQRLIRAIGKSKAMEMILTGNQIDAHQAEKDGLVARVYPVEELVDAAVAMGGKISSMSLPVTLMAKEAVNAAFEGTLAEGVRLERRMFHSAFALDDQKEGMSAFAEKRKPEWSHK 585
            AGADIKEMA LTF+EAYGE++F E+ARL  IRKP+IAAVNGYALGGGCELAMMCDIILAGEKA FGQPEITLGVIPGWGGTQRLIRA+GKSKAMEM+LTGNQIDAHQAE++GLVARVYP EELVD AVA+  KI SMSLPV LMAKEA NAA+EGTLAEG RLERRMFHS FALDDQKEGM+AFAEKR P+W+HK
Sbjct:   99 AGADIKEMASLTFSEAYGENRFKEFARLTSIRKPIIAAVNGYALGGGCELAMMCDIILAGEKAMFGQPEITLGVIPGWGGTQRLIRAVGKSKAMEMVLTGNQIDAHQAEREGLVARVYPAEELVDQAVAIAAKIGSMSLPVALMAKEATNAAYEGTLAEGCRLERRMFHSCFALDDQKEGMAAFAEKRAPKWTHK 293
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BLAST of mRNA_H-paniculata_contig14651.2781.1 vs. uniprot
Match: A0A835ZGP5_9STRA (ClpP/crotonase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGP5_9STRA)

HSP 1 Score: 293 bits (750), Expect = 1.630e-93
Identity = 141/195 (72.31%), Postives = 167/195 (85.64%), Query Frame = 1 
Query:    1 AGADIKEMACLTFAEAYGEDKFNEWARLGKIRKPLIAAVNGYALGGGCELAMMCDIILAGEKAKFGQPEITLGVIPGWGGTQRLIRAIGKSKAMEMILTGNQIDAHQAEKDGLVARVYPVEELVDAAVAMGGKISSMSLPVTLMAKEAVNAAFEGTLAEGVRLERRMFHSAFALDDQKEGMSAFAEKRKPEWSHK 585
            AGADI EM  L+F++ Y +DKF +WA L ++RKPLIAAVNGYALGGGCELAMMCDIILAG+ AKFGQPEI LGVIPGWGGTQRL+RA+GKSKAMEM+LTG+ IDA +A  DGLV+RV   E++V+ AVA+G KI+SMS P  LMAKEAVN+A+E TL EG+ +ERRMFHS FA +DQKEGM+AF EKRKPEW+HK
Sbjct:   95 AGADITEMVGLSFSDCYNQDKFKDWAALTRVRKPLIAAVNGYALGGGCELAMMCDIILAGDDAKFGQPEINLGVIPGWGGTQRLVRAVGKSKAMEMVLTGSMIDAKRANWDGLVSRVVEPEKVVETAVALGNKIASMSRPSVLMAKEAVNSAYELTLTEGLHVERRMFHSLFATEDQKEGMAAFLEKRKPEWTHK 289
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BLAST of mRNA_H-paniculata_contig14651.2781.1 vs. uniprot
Match: A0A812XL95_SYMMI (Echs1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XL95_SYMMI)

HSP 1 Score: 277 bits (708), Expect = 2.700e-87
Identity = 137/195 (70.26%), Postives = 157/195 (80.51%), Query Frame = 1 
Query:    1 AGADIKEMACLTFAEAYGEDKFNEWARLGKIRKPLIAAVNGYALGGGCELAMMCDIILAGEKAKFGQPEITLGVIPGWGGTQRLIRAIGKSKAMEMILTGNQIDAHQAEKDGLVARVYPVEELVDAAVAMGGKISSMSLPVTLMAKEAVNAAFEGTLAEGVRLERRMFHSAFALDDQKEGMSAFAEKRKPEWSHK 585
            AGADIKEM+   F + Y  + F +W  + KIRKP IAAV GYALGGGCELAMMCDII+A + AKFGQPEITLGVIPG GGTQRLIRA+GK+KAMEM+LTGN IDAHQAE+DGLV RV P EELVD A+ MG KI+S S P   MAKE VN+A+E +LAEGVR ERR+FHS FAL DQKEGM+AF EKR   W+H+
Sbjct:   88 AGADIKEMSKQEFVDCYTNNMFADWTEVTKIRKPTIAAVAGYALGGGCELAMMCDIIIAADNAKFGQPEITLGVIPGCGGTQRLIRAVGKAKAMEMVLTGNMIDAHQAERDGLVCRVVPKEELVDVALKMGDKIASFSQPAVAMAKETVNSAYELSLAEGVRFERRIFHSMFALRDQKEGMAAFIEKRPATWTHR 282
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BLAST of mRNA_H-paniculata_contig14651.2781.1 vs. uniprot
Match: A0A2D4CC62_PYTIN (Enoyl-CoA hydratase, mitochondrial n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CC62_PYTIN)

HSP 1 Score: 273 bits (697), Expect = 1.060e-85
Identity = 134/195 (68.72%), Postives = 161/195 (82.56%), Query Frame = 1 
Query:    1 AGADIKEMACLTFAEAYGEDKFNEWARLGKIRKPLIAAVNGYALGGGCELAMMCDIILAGEKAKFGQPEITLGVIPGWGGTQRLIRAIGKSKAMEMILTGNQIDAHQAEKDGLVARVYPVEELVDAAVAMGGKISSMSLPVTLMAKEAVNAAFEGTLAEGVRLERRMFHSAFALDDQKEGMSAFAEKRKPEWSHK 585
            AGADIKEMA  +F EAY  + F +W  + K+ KP+IAAVNGYALGGGCELAM+CD+I+AG+KAKFGQPEITLG IPG GGTQRLIRA+GKSKAMEMILTGN IDAHQAE+DGLVARV P ++L++ A+    KI+S S PV  MAKEAVNAAFE +L EG++ E R+F S+FA  DQKEGM+AF EKRKP ++H+
Sbjct:   84 AGADIKEMANKSFVEAYKSNMFADWGDITKVTKPVIAAVNGYALGGGCELAMLCDMIIAGDKAKFGQPEITLGTIPGCGGTQRLIRAVGKSKAMEMILTGNMIDAHQAERDGLVARVVPADKLLEEALKTADKIASFSQPVVKMAKEAVNAAFEQSLQEGLKYESRLFWSSFATKDQKEGMAAFVEKRKPNFTHE 278
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BLAST of mRNA_H-paniculata_contig14651.2781.1 vs. uniprot
Match: A0A7Z0DAR6_9ACTN (Enoyl-CoA hydratase n=1 Tax=Naumannella cuiyingiana TaxID=1347891 RepID=A0A7Z0DAR6_9ACTN)

HSP 1 Score: 271 bits (692), Expect = 3.320e-85
Identity = 132/195 (67.69%), Postives = 157/195 (80.51%), Query Frame = 1 
Query:    1 AGADIKEMACLTFAEAYGEDKFNEWARLGKIRKPLIAAVNGYALGGGCELAMMCDIILAGEKAKFGQPEITLGVIPGWGGTQRLIRAIGKSKAMEMILTGNQIDAHQAEKDGLVARVYPVEELVDAAVAMGGKISSMSLPVTLMAKEAVNAAFEGTLAEGVRLERRMFHSAFALDDQKEGMSAFAEKRKPEWSHK 585
            AGADIKEM   +F++ YG D F++W R+ KIRKP+IAAV GYALGGGCELAMMCD+I+A + AKFGQPEI LGVIPG GGTQRL RA+GKSKAM+++LTG  +DA +AE+ GLVAR+ P  ELVDAAVA+   I + SLPV +MAKEAVN A E TL+EGVR ERR F S FA +DQKEGMSAF EKR PE+ H+
Sbjct:   66 AGADIKEMQSRSFSDVYGGDLFSDWDRITKIRKPIIAAVAGYALGGGCELAMMCDLIIAADSAKFGQPEINLGVIPGMGGTQRLTRAVGKSKAMDLVLTGRMMDAEEAERSGLVARIVPAAELVDAAVAVAETIGAKSLPVVMMAKEAVNVALETTLSEGVRFERRTFFSTFATEDQKEGMSAFVEKRDPEFKHR 260
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BLAST of mRNA_H-paniculata_contig14651.2781.1 vs. uniprot
Match: A0A0P1A5R9_PLAHL (Enoyl-hydratase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A5R9_PLAHL)

HSP 1 Score: 270 bits (691), Expect = 9.360e-85
Identity = 135/195 (69.23%), Postives = 156/195 (80.00%), Query Frame = 1 
Query:    1 AGADIKEMACLTFAEAYGEDKFNEWARLGKIRKPLIAAVNGYALGGGCELAMMCDIILAGEKAKFGQPEITLGVIPGWGGTQRLIRAIGKSKAMEMILTGNQIDAHQAEKDGLVARVYPVEELVDAAVAMGGKISSMSLPVTLMAKEAVNAAFEGTLAEGVRLERRMFHSAFALDDQKEGMSAFAEKRKPEWSHK 585
            AGADIKEMA  +F EAY  + F  W  + KI KP+IAAVNGYALGGGCELAM+CD+I+AG+ AKFGQPEITLG IPG GGTQRLIRA+GKSKAMEMILTGN IDAHQAEKDGLVARV P + L+D A     KI+S S PV  MAKEAVNAA+E TL EG++ E R+F S+FA  DQKEGMSAF  KRK E++++
Sbjct:   87 AGADIKEMATKSFVEAYNSNMFANWGDITKISKPVIAAVNGYALGGGCELAMLCDLIIAGDSAKFGQPEITLGTIPGCGGTQRLIRAVGKSKAMEMILTGNMIDAHQAEKDGLVARVVPADHLLDEACKTANKIASFSQPVVKMAKEAVNAAYEQTLQEGLKFESRLFWSSFATKDQKEGMSAFVNKRKAEFTNE 281
[Close]
BLAST of mRNA_H-paniculata_contig14651.2781.1 vs. uniprot
Match: A0A839N9P3_9MICO (Enoyl-CoA hydratase n=2 Tax=Flexivirga oryzae TaxID=1794944 RepID=A0A839N9P3_9MICO)

HSP 1 Score: 268 bits (686), Expect = 2.480e-84
Identity = 133/193 (68.91%), Postives = 159/193 (82.38%), Query Frame = 1 
Query:    1 AGADIKEMACLTFAEAYGEDKFNEWARLGKIRKPLIAAVNGYALGGGCELAMMCDIILAGEKAKFGQPEITLGVIPGWGGTQRLIRAIGKSKAMEMILTGNQIDAHQAEKDGLVARVYPVEELVDAAVAMGGKISSMSLPVTLMAKEAVNAAFEGTLAEGVRLERRMFHSAFALDDQKEGMSAFAEKRKPEWS 579
            AGADIKEMA  TFA+ YGE+ F  W RL ++R PLIAAV GYALGGGCELAM+CD+I+A + AKFGQPEITLGVIPG GG+QRL RA+GK+KAM+++LTG Q+ A +AE+ GLVARV P E L+ AA  +  KI+SMSLP+ +MAK+AVNAAFE TLAEGVRLERR FH+AFA DDQKEGM+AF EKR   +S
Sbjct:   64 AGADIKEMADKTFAQVYGENLFGAWERLTRVRTPLIAAVAGYALGGGCELAMLCDLIIAADTAKFGQPEITLGVIPGMGGSQRLTRAVGKAKAMDLVLTGRQMGADEAERSGLVARVVPAEGLLAAAKEVADKIASMSLPIAMMAKDAVNAAFETTLAEGVRLERRSFHAAFATDDQKEGMAAFVEKRPANFS 256
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BLAST of mRNA_H-paniculata_contig14651.2781.1 vs. uniprot
Match: V4TIN4_9HYPH (Enoyl-CoA hydratase n=1 Tax=Lutibaculum baratangense AMV1 TaxID=631454 RepID=V4TIN4_9HYPH)

HSP 1 Score: 268 bits (684), Expect = 4.790e-84
Identity = 133/195 (68.21%), Postives = 156/195 (80.00%), Query Frame = 1 
Query:    1 AGADIKEMACLTFAEAYGEDKFNEWARLGKIRKPLIAAVNGYALGGGCELAMMCDIILAGEKAKFGQPEITLGVIPGWGGTQRLIRAIGKSKAMEMILTGNQIDAHQAEKDGLVARVYPVEELVDAAVAMGGKISSMSLPVTLMAKEAVNAAFEGTLAEGVRLERRMFHSAFALDDQKEGMSAFAEKRKPEWSHK 585
            AGADIKEM   TF +AY ED   EW RL + RKP+IAAV GYALGGGCELAMMCD I+A E AKFGQPEITLG+IPG GGTQRLIRAIGK+KAM+MILTG  +DA +AE+ GLV+RV PV ELVD A+    +I  +S+P  +MAKEAVN+A E TL+EG RLERR+FHS FA +DQKEGM AFAEKR P++ H+
Sbjct:   63 AGADIKEMQGKTFVQAYREDFIAEWERLSRARKPVIAAVAGYALGGGCELAMMCDFIIAAENAKFGQPEITLGIIPGAGGTQRLIRAIGKAKAMDMILTGRVMDAREAERSGLVSRVVPVGELVDTALEAAERIGDLSMPALMMAKEAVNSAHETTLSEGCRLERRLFHSLFATEDQKEGMKAFAEKRTPQFRHR 257
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BLAST of mRNA_H-paniculata_contig14651.2781.1 vs. uniprot
Match: A0A8K1CNU3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNU3_PYTOL)

HSP 1 Score: 268 bits (686), Expect = 5.110e-84
Identity = 132/195 (67.69%), Postives = 157/195 (80.51%), Query Frame = 1 
Query:    1 AGADIKEMACLTFAEAYGEDKFNEWARLGKIRKPLIAAVNGYALGGGCELAMMCDIILAGEKAKFGQPEITLGVIPGWGGTQRLIRAIGKSKAMEMILTGNQIDAHQAEKDGLVARVYPVEELVDAAVAMGGKISSMSLPVTLMAKEAVNAAFEGTLAEGVRLERRMFHSAFALDDQKEGMSAFAEKRKPEWSHK 585
            AGADIKEMA   F +AY  + F  W  + K+ KP+IAAVNGYALGGGCELAM CD+I+AG+KAKFGQPEITLG IPG GGTQRLIRA+GKSKAMEMILTGN IDA QAE+DGLVARV P ++L+D A+    KI+S S PV  MAKEAVNA++E +L EG++ E R+F S+FA  DQKEGM+AF EKRKP ++HK
Sbjct:   86 AGADIKEMATREFVDAYKSNMFANWGDITKVSKPVIAAVNGYALGGGCELAMQCDMIIAGDKAKFGQPEITLGTIPGCGGTQRLIRAVGKSKAMEMILTGNMIDAQQAERDGLVARVVPADQLLDEALKTADKIASFSQPVVKMAKEAVNASYEQSLQEGLKFESRLFWSSFATKDQKEGMAAFVEKRKPNFTHK 280
[Close]
BLAST of mRNA_H-paniculata_contig14651.2781.1 vs. uniprot
Match: A0A7S2EM59_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EM59_TRICV)

HSP 1 Score: 266 bits (679), Expect = 6.020e-84
Identity = 130/195 (66.67%), Postives = 156/195 (80.00%), Query Frame = 1 
Query:    1 AGADIKEMACLTFAEAYGEDKFNEWARLGKIRKPLIAAVNGYALGGGCELAMMCDIILAGEKAKFGQPEITLGVIPGWGGTQRLIRAIGKSKAMEMILTGNQIDAHQAEKDGLVARVYPVEELVDAAVAMGGKISSMSLPVTLMAKEAVNAAFEGTLAEGVRLERRMFHSAFALDDQKEGMSAFAEKRKPEWSHK 585
            AGADI EM+ + FA+AY  D F  WA +G + KPLIAAVNGYALGGGCELAMMCD++LAG+ AKFGQPEI LGVIPG GGTQRL+RA+GKSKAMEM+L+GN IDA +AE+DGLV+RV P + LV+ A  +G  I+S      +MAKEAVNAA E TL+EG+R ERR+FHS FA +DQKEGM AF  KRKP++ HK
Sbjct:   18 AGADISEMSGVKFADAYKSDMFRRWAEVGDVSKPLIAAVNGYALGGGCELAMMCDVVLAGDGAKFGQPEINLGVIPGAGGTQRLVRAVGKSKAMEMVLSGNTIDAERAERDGLVSRVVPSDALVEEATKLGFTIASKGRVAVMMAKEAVNAADEMTLSEGLRFERRLFHSLFATEDQKEGMEAFLGKRKPQFKHK 212
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14651.2781.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKM6_ECTSI4.180e-11185.13Enoyl-CoA hydratase n=1 Tax=Ectocarpus siliculosus... [more]
A0A835ZGP5_9STRA1.630e-9372.31ClpP/crotonase-like domain-containing protein n=1 ... [more]
A0A812XL95_SYMMI2.700e-8770.26Echs1 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A2D4CC62_PYTIN1.060e-8568.72Enoyl-CoA hydratase, mitochondrial n=1 Tax=Pythium... [more]
A0A7Z0DAR6_9ACTN3.320e-8567.69Enoyl-CoA hydratase n=1 Tax=Naumannella cuiyingian... [more]
A0A0P1A5R9_PLAHL9.360e-8569.23Enoyl-hydratase n=1 Tax=Plasmopara halstedii TaxID... [more]
A0A839N9P3_9MICO2.480e-8468.91Enoyl-CoA hydratase n=2 Tax=Flexivirga oryzae TaxI... [more]
V4TIN4_9HYPH4.790e-8468.21Enoyl-CoA hydratase n=1 Tax=Lutibaculum baratangen... [more]
A0A8K1CNU3_PYTOL5.110e-8467.69Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2EM59_TRICV6.020e-8466.67Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14651contigH-paniculata_contig14651:1484..6014 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score326.6
Seed ortholog evalue7.5e-87
Seed eggNOG ortholog2880.D8LKM6
KEGG rclassRC00770,RC00831,RC00834,RC01086,RC01095,RC01098,RC01103
KEGG koko:K07511
KEGG ReactionR02685,R03026,R03045,R04137,R04170,R04204,R04224,R04738,R04740,R04744,R04746,R04749,R05595,R06942
KEGG Pathwayko00062,ko00071,ko00280,ko00310,ko00380,ko00410,ko00627,ko00640,ko00650,ko00930,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00062,map00071,map00280,map00310,map00380,map00410,map00627,map00640,map00650,map00930,map01100,map01110,map01120,map01130,map01200,map01212
KEGG ModuleM00013,M00032,M00085,M00087
Hectar predicted targeting categoryother localisation
EggNOG free text desc.enoyl-CoA hydratase activity
EggNOG OGsCOG1024@1,KOG1680@2759
EC4.2.1.17
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons5
Model size1364
Cds size567
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929165.8171682-UTR-H-paniculata_contig14651:1483..22591622929165.8171682-UTR-H-paniculata_contig14651:1483..2259Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14651 1484..2259 -
1691480756.9418473-UTR-H-paniculata_contig14651:1483..22591691480756.9418473-UTR-H-paniculata_contig14651:1483..2259Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14651 1484..2259 -
1622929165.8991582-UTR-H-paniculata_contig14651:5993..60141622929165.8991582-UTR-H-paniculata_contig14651:5993..6014Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14651 5994..6014 -
1691480757.0030868-UTR-H-paniculata_contig14651:5993..60141691480757.0030868-UTR-H-paniculata_contig14651:5993..6014Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14651 5994..6014 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929165.832284-CDS-H-paniculata_contig14651:2259..23251622929165.832284-CDS-H-paniculata_contig14651:2259..2325Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14651 2260..2325 -
1691480756.9544332-CDS-H-paniculata_contig14651:2259..23251691480756.9544332-CDS-H-paniculata_contig14651:2259..2325Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14651 2260..2325 -
1622929165.8437912-CDS-H-paniculata_contig14651:3746..39341622929165.8437912-CDS-H-paniculata_contig14651:3746..3934Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14651 3747..3934 -
1691480756.9639056-CDS-H-paniculata_contig14651:3746..39341691480756.9639056-CDS-H-paniculata_contig14651:3746..3934Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14651 3747..3934 -
1622929165.858965-CDS-H-paniculata_contig14651:4415..45201622929165.858965-CDS-H-paniculata_contig14651:4415..4520Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14651 4416..4520 -
1691480756.9730196-CDS-H-paniculata_contig14651:4415..45201691480756.9730196-CDS-H-paniculata_contig14651:4415..4520Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14651 4416..4520 -
1622929165.8740187-CDS-H-paniculata_contig14651:5045..51721622929165.8740187-CDS-H-paniculata_contig14651:5045..5172Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14651 5046..5172 -
1691480756.983105-CDS-H-paniculata_contig14651:5045..51721691480756.983105-CDS-H-paniculata_contig14651:5045..5172Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14651 5046..5172 -
1622929165.8862958-CDS-H-paniculata_contig14651:5912..59931622929165.8862958-CDS-H-paniculata_contig14651:5912..5993Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14651 5913..5993 -
1691480756.9929075-CDS-H-paniculata_contig14651:5912..59931691480756.9929075-CDS-H-paniculata_contig14651:5912..5993Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14651 5913..5993 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14651.2781.1prot_H-paniculata_contig14651.2781.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig14651 2260..5993 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig14651.2781.1

>prot_H-paniculata_contig14651.2781.1 ID=prot_H-paniculata_contig14651.2781.1|Name=mRNA_H-paniculata_contig14651.2781.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=189bp
MACLTFAEAYGEDKFNEWARLGKIRKPLIAAVNGYALGGGCELAMMCDII
LAGEKAKFGQPEITLGVIPGWGGTQRLIRAIGKSKAMEMILTGNQIDAHQ
AEKDGLVARVYPVEELVDAAVAMGGKISSMSLPVTLMAKEAVNAAFEGTL
AEGVRLERRMFHSAFALDDQKEGMSAFAEKRKPEWSHK*
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mRNA from alignment at H-paniculata_contig14651:1484..6014-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig14651.2781.1 ID=mRNA_H-paniculata_contig14651.2781.1|Name=mRNA_H-paniculata_contig14651.2781.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4531bp|location=Sequence derived from alignment at H-paniculata_contig14651:1484..6014- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCTGGCGCGGACATTAAGGAGATGGCATGCTTGACGTTCGCAGAGGCGTA
TGGCGAGGACAAGTTCAATGAGTGGGCGCGACTCGGAAAGATCAGAAAAC
CGGTGAGCCGTAGAACTCTAACTTACGTCTATGTTCCGCCTTGAAATGTT
TTTTTGTGCTCTTTGGCGAGGGGAAAGTAAACGACCAGGACCAGGTGTTT
GTCTCAAGAAGTTTGACTGAGTTCGGATTCATACCCCACTACCGCTTGGA
TCATGACGCGCAAGTCAGCGCTTCTGCAGTGCCGGTCAAGTTGTCAGCAC
ACTGTTGGAGGTTACCTGGGCTTCTCTCGGTTGAGCACGATTTTTACTAC
GACCTTTGTCGTCCGTCCTGACTCCAGTGTCAGCGAAGTGGTTTAGCATT
CTTCAAGTACAATAGATGAGAGCCAGCAGTCAGGGCATGATAAGGCAAGT
AACTACTGCGATGCCTGTTGGAAGTTTCCATTGCGCCCTTGCACAGAGGT
GCGCTAATGGCCAAGCGCCGGCCGCTCGCTCCTAGCTGCTGTTCTTGTCC
CAAGTTGGTGTACGGCGATGAAGTAACTATGGCCAAGGCAAAGATTTGAG
AATGCACTCGTCTACCTCGCAGAAGGCAAGCGGATTAAAAATGCGCGTGC
CTTCAACATCACTGAGGTACCACTGTACAACAGCAAGTTTTTTTAGGTCT
TCACGCCTCTAGCTGTCTGGCTATCTGACTTGATGGAGTACGAAAACACG
ACCGAGCACAATGAAGAACACCTCTTGATGTATGCCGTGTTACAGTGGTC
GCCCGGTCGTCCTTGCTCTCATTTTGTCCCTATCTTCGCAAGCTCATCGC
AGCCGTGAACGGGTACGCACTGGGTGGGGGTTGCGAGCTAGCGATGATGT
GTGATATTATTCTTGCGGGGGAGAAAGCGAAGTTCGGACAGCCCGAGATT
ACGCTTGGAGTTATCCCCGGTGAGGACGTGGCGCTTGGTGGGGAGAGTGG
AATATTTTGGGCTGAGCGTTGTCGTTCGCCTTTTCGTACCTTGAATGTTT
GTATGTGGTTTCTGCTCAATATCCCAGCAGCGCAATCAGATTTTCCAATA
TCGTCGCCGCACTACTGAGCAGGTGGCGGGATCATATACGAACGATCGTT
TGGTGATCGAGCGTTCTCTTGTTGATGAAGATGTCTCTTGTTGATCAAGC
GGCCTCTTTCTGTCATTGTTTTCGTGATTTTTATTTTTGCGGTGCAATCT
CGTAAGGCAAGATCGCTGGCCGTTGTCGACAGCAGTGCCAGGTTGGCCTA
GGGTAAGTCCTTTGTGCCCCGGGCGTGAGCGAGCATCTACCGTACCCATG
TGAAAACGGAGGCTTATGTCGCGATTCCTGCCGAACATGCCCGATGCCAA
GAAGCTTTGACATACTGTGCCCTACCCTGTATCTTTGTGTTTTGGGCGTT
TGTCGATGCTATGCAACCTGTTGTTTTGTCCGCACACGAAACAGGCTGGG
GTGGTACACAACGGCTGATAAGAGCAATAGGAAAATCGAAAGCAATGGAG
ATGATTCTCACCGGGAACCAAATAGATGCACACCAGGCAGAGAAGGACGG
TGAGGCCACTTTGCGATCATGCAATATAATGTACCGCAAAACGCAATAGC
AATAGTTGCGCTGGGTGAGGGGCTCAGGTTGTAGCTTCTACCGAAGCGGA
GCCAACCGTACGCTATATGGAATAGTGGGCTGGCTGCCTCAGGGTAGCTT
TCGGGAAAGTCTGCTAATGCAGTGAGTGCTATTTGGCGCGGTTGCCGCGA
CCCCGTCACTTTAGTCGCTTTGTTCTACTCATGCTTTGTTCCACTCATGA
AATGTTACGCTTCTGATTTCCCCTTCTTCAGAGTCTCTTTGTCTCTTATA
ATTCTTCGCCATAGTTCAGTTGACCGGTCCGTGCTTCTGTAGACCCTTTT
CAATGATTCGTTCACGCCTCCTTGGGAGATTCAATCCATTCTACAAACCC
GGGTTATCTCTCTTTTCCTCTTGTTCGCGTATGTATATGATTAGTTTTAC
GTATATTTTCTATTTTCCCTTCTAATTTAGGGTTGGTTGCAAGAGTTTAC
CCGGTGGAGGAGCTAGTGGATGCGGCAGTGGCTATGGGAGGAAAGATATC
GTCTATGTCATTGCCGGTTACCCTTATGGCAAAGGAGGCAGTGAACGCAG
CGTTTGAGGGGACGTTGGCGGAGGGTGTCCGTCTCGAGCGCCGAATGTTT
CACAGCGCCTTCGCGCTGGTGAGATCGCTTACGAGAAACGTGTACAGCTT
TCGTATTTTCGGGCCACTTACCCCATAATACCACAAACCTGGGCTCCGCA
CGTCTGCATACACCTATACAGTGACACTGAGGACTGTGGCTACAACCATT
AATAATTAGTTATATTTGTGATTTGGGGTCCAAATGCATCTGTGGACGCT
ATCAGTAGTTTTTTAGCAAGTTACTGTTCTGTCTTATTATCCAAGGTTGT
CGTAGCAAAGTACCTTGGTATTACTGACAATGGGTATACGTGGAGACTTG
CGAACCCAGACTTATGTGACCATGAACAGTATGGGCATTGCACTATTTTT
AGCATTCATGCAAGAAGAGCTGTTTCGCACTCCCCGAAATTTCCCAAGAA
AAAAGCTGCCTATACGCCGAACTTAACGAGATTGGCAAGTCTCAACTTTT
CGCGACTTTAAATGGGGTAGCATTTTTGTCATATCAGCGCCTTTTGCGAC
GATGTGAACTCCGCCAAAGCACACTGTGCCGAAGGGGTAAAGGTTGGGGT
AAGAAGTAGCGTTAGATGCTATTGTTCATTATCTCGCGTCGGGGCACAAC
GAATCATGAACCATGCAAAAACAGAACCATAACTCAGTCCGTATGAAAGT
AGATGGATAAGGAGCAGGAAGCGGCGAGCGCGCCTACGGTGGGTGATAAT
AACTATTACCAGTTTCATGAATGGAACAAAGGCTTCGTCATTGTTGGTGA
TAATTGAGGGCCCTCGTTGGCGCTGCATTTCACTTGCGAATATTCAAGTT
TTTGTTACCTCGGTTGACGAGTCAGGGCTTGGCAGTACGACTCTTCACCG
CAAAGGTTCAGTGGCGGCGGGCGTAGGTATTTCTGACGACAGTCCACACG
CCCGCAGACGATAGAATGAAGTCTTGGATATCATCTTGTGTTGGATCAGT
CCTCGCGATGGACTTATGGTTTTTCTCAACTCTTAAACATTCTCCAGTTG
AGCGTCATAGGAAAAAAGAATAATAGCTTTATACAGTTTACGTCTGATAG
AATAAGAACTGCAAGTTAACCTGCGAATATTGCTTAACCGGATTTACAGT
TTTTAGGCTCACATAAAGTTTATACTCGCCACCGGAGTGTATTAATGTCT
TAACGGCGTGTCCTGTGCTTGGCACGCAGGGCACGACTAGTGGATGAATG
AACTTTCGCTGGCTGACGCGAAGATAAAAACACGAGGCGGGTATCGTAGT
GTTTTCCCAATATATATATTTATCTCTTCGTGATTTTTCATTGTATGGTC
TAGCTTGCCTATGGGAATACACCAGGGCGGGCGATTGATTCCGTCGATTT
GTTTGTGCGATGTGCGTGGTGATTGTACAGCTTGTTGATTCTCCCTCACC
GTGCGCTATTGCTTTGCTTCTACGCGTGCGTTGTCGCAGGACGATCAAAA
AGAAGGAATGTCGGCGTTCGCGGAAAAACGCAAGCCGGAGTGGAGCCACA
AGTAGTGTCATCTTTGCATTTTTGGGGTGTGCCCATCTCGACTGTCTCTG
GGAGCTAACTGGTGGCGTACATTTCCCAAAGCGCTGTGATGGACAGGCAG
TATCTAACACAGGCTGTGGGTGGGCCTGCGTTGATAAGTCATCGTGTTTC
TCGCCCGCTGTCGCTGTGCTCAACCTTGACGGTGTCCAGTCGAACTATTG
TACTGCGGGTCTTGGTTGTAAATCCTACTGAGTGTCGATTGTTGCGGCCT
GTCTGTGGACCCTGGTATCGTAACCGAAGACAAGGTCAAGGTTTCAAGGT
CTATTTCTTGATGTGAAATCTACCAAGGCTGTCACGAATAATTCTCGTTC
TAACAAGGTTCTATTTAAAGGAGAGAACATAGGTGGTCTCGTCTGGTTGC
CTACACGTCGGTGTACCATCTGCGGTTCTTTGATCTCTTTCGCGTTCTGT
TTCTGATGTCTTGGTTGGATTGCTTTGGTCTAAACGTGCAAACAAACCAC
CATGCAATAAACGCTGCTCAGCTGCGGCGTGCCATGGCCGGTGGCACGTA
GTAAGTGACCGAAAGTGTGAAGTACAGCAATCAACGACACAACAACAACT
ACGTTTCTACATGATGTCTTCGGGTGGATGGTGATCAACCATTGGAAAAT
TTGAAGGGCCGAACACAGATGGAAGTATAGGCGGTCAGTTAGTGGTTCAT
TTGTTTGTGGTAGTGATGACCTCTATTGATCTTTCAAAGAATATAAGGCC
CGCACCACCGCAGAACCGCAGACCTGGTGGC
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Coding sequence (CDS) from alignment at H-paniculata_contig14651:1484..6014-

>mRNA_H-paniculata_contig14651.2781.1 ID=mRNA_H-paniculata_contig14651.2781.1|Name=mRNA_H-paniculata_contig14651.2781.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1134bp|location=Sequence derived from alignment at H-paniculata_contig14651:1484..6014- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCATGCTTGACGTTCGCAGAGGCGTATGGCGAGGACAAGTTCAATGA
GTGGGCGCGACTCGGAAAGATCAGAAAACCGATGGCATGCTTGACGTTCG
CAGAGGCGTATGGCGAGGACAAGTTCAATGAGTGGGCGCGACTCGGAAAG
ATCAGAAAACCGCTCATCGCAGCCGTGAACGGGTACGCACTGGGTGGGGG
TTGCGAGCTAGCGATGATGTGTGATATTATTCTTGCGGGGGAGAAAGCGA
AGTTCGGACAGCCCGAGATTACGCTTGGAGTTATCCCCGCTCATCGCAGC
CGTGAACGGGTACGCACTGGGTGGGGGTTGCGAGCTAGCGATGATGTGTG
ATATTATTCTTGCGGGGGAGAAAGCGAAGTTCGGACAGCCCGAGATTACG
CTTGGAGTTATCCCCGGCTGGGGTGGTACACAACGGCTGATAAGAGCAAT
AGGAAAATCGAAAGCAATGGAGATGATTCTCACCGGGAACCAAATAGATG
CACACCAGGCAGAGAAGGACGGCTGGGGTGGTACACAACGGCTGATAAGA
GCAATAGGAAAATCGAAAGCAATGGAGATGATTCTCACCGGGAACCAAAT
AGATGCACACCAGGCAGAGAAGGACGGGTTGGTTGCAAGAGTTTACCCGG
TGGAGGAGCTAGTGGATGCGGCAGTGGCTATGGGAGGAAAGATATCGTCT
ATGTCATTGCCGGTTACCCTTATGGCAAAGGAGGCAGTGAACGCAGCGTT
TGAGGGGACGTTGGCGGAGGGTGTCCGTCTCGAGCGCCGAATGTTTCACA
GCGCCTTCGCGCTGGGTTGGTTGCAAGAGTTTACCCGGTGGAGGAGCTAG
TGGATGCGGCAGTGGCTATGGGAGGAAAGATATCGTCTATGTCATTGCCG
GTTACCCTTATGGCAAAGGAGGCAGTGAACGCAGCGTTTGAGGGGACGTT
GGCGGAGGGTGTCCGTCTCGAGCGCCGAATGTTTCACAGCGCCTTCGCGC
TGGACGATCAAAAAGAAGGAATGTCGGCGTTCGCGGAAAAACGCAAGCCG
GAGTGGAGCCACAAGTAGGACGATCAAAAAGAAGGAATGTCGGCGTTCGC
GGAAAAACGCAAGCCGGAGTGGAGCCACAAGTAG
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