mRNA_H-paniculata_contig1462.2770.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig1462.2770.1
Unique Name	mRNA_H-paniculata_contig1462.2770.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig1462.2770.1 vs. uniprot
Match: A0A6H5J909_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J909_9PHAE)

HSP 1 Score: 416 bits (1069), Expect = 1.260e-131
Identity = 229/440 (52.05%), Postives = 294/440 (66.82%), Query Frame = 3

Query:    3 EHDKSLLLRIKTAGVERYLMKDPELLFRHFMLHKEYPKAVYVMATEAHAEQGSNMHIRDRVDCLVKAISACHKCDLDSAQMVMPGWSLSHAKRQALEDEMDVMLTQERLLRNLEASMAPLQRLKEKGRLTEDLEGELDERARVANEWTWGIAGPTELYERAMAFFLWEGCLQLLQCCGKDEPALARKLVRSIIWREVPMYTREGEASHTHAFITRGRSRKGEVAVDDVRLVLDDGA---------------AFEDDGWFGPLLEKTQALAHELLSRKETYVLPVDTLCRELQLIADEYYYAGHGEAEVPPPCVAASVRQAGVSPTALLDAYESMNRTCYPKDDELMLRWLEVMTEVLTWACQ--------TQQPGVLAESVRPERVERLAHDTMRGLETVRASPRM---------QDPGAEYKIAELCRQLEDKVLSSVR 1226
            EHDK LLL I+T GVE+YL +DPE LFRH+ML K+YPKAV++M  EA  E GS +H+R RV+CL+KAISACHKCDLDSAQMV PGWSL+HAK + +EDE DV+L QERLL  L+A+MAPL+RL ++GR TE L  EL ER R+A  WT  I  P+ELY +A   FLWEGCL+L+QCC  DEP +A++L+RSIIWREVP  +R G       FI+  R R GEV VDDVR  LD G                AFEDDGWF PLL+K   L+ ELL+ K ++VL V+TLC ELQ+IADE++ AG   + +   CV  +V +AG+S  ALLDAYE +N+  YP DD   LR   VM  +L  A          T   G+++E++RPER+ERLAHDT+ GL+++R S            +D GA   + E+ R++ DK++ S R
Sbjct:  547 EHDKKLLLSIRTPGVEQYLKRDPEDLFRHYMLSKDYPKAVHLMDREARVEAGSGVHVRHRVECLLKAISACHKCDLDSAQMVAPGWSLNHAKLRTMEDERDVLLVQERLLSELKATMAPLERLAQEGRGTEGLIAELSERRRIAETWTTDIVDPSELYRQASGSFLWEGCLRLMQCCEFDEPIVAKRLIRSIIWREVPSVSRGGSKCRAQVFISSMRDRPGEVEVDDVRQELDRGLGGGGGDGGTRAGRRIAFEDDGWFTPLLDKMSVLSQELLAHKASFVLSVETLCLELQMIADEFHEAGGSASAL---CVVEAVGRAGLSALALLDAYEYLNQHHYPSDDHARLRRFAVMARLLELAAAGGDGNKAATGGVGLVSETIRPERLERLAHDTLAGLDSLRFSSSAGAARGDDADRDAGARELVEEVRRKV-DKLVRSPR 982

[Close]

BLAST of mRNA_H-paniculata_contig1462.2770.1 vs. uniprot
Match: D7G0M6_ECTSI (Nucleoporin_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M6_ECTSI)

HSP 1 Score: 336 bits (861), Expect = 1.260e-98
Identity = 205/455 (45.05%), Postives = 268/455 (58.90%), Query Frame = 3

Query:    3 EHDKSLLLRIKTAGVERYLMKDPELLFRHFMLHKEYPKAVYVMATEAHAEQGSNMHIRDRVDCLVKAISACHKCDLDSAQMVMPGWSLSHAKRQALEDEMDVMLTQERLLRNLEASMAPLQRLKEKGRLTEDLEGELDERARVANEWTWGIAGPTELYERAMAFFLWEGCLQLLQCCGKDEPALARKLVRS--------------------------IIWREVP--MYTREG---EASHTHAFITRGRSRKGEVAVDDVRLVLDDGAAFEDDGWFGPLLE-KTQALAHELLSRKETYVLPVDTLCRELQLIADEYYYAGHGEAEVPPPCVAASVRQAGVSPTALLDAYESMNRTCYPKDDELMLRWLEVMTEVLTWACQTQQP--------GVLAESVRPERVERLAHDTMRGLETVR------ASPRMQDPGAEYKIAELCRQLEDKVLSSVRT 1229
            EHDK LL+ I+T GVERYL +DPE LFRH+ML KEYPKAV++M  EA  E  S +H+R RV+CL+KAISACHKCDLDSAQMV PGWSL+HAK + +EDE DV+L QERLL +L+A+M PL+RL ++GR TE L  EL ER R+A  WT  I  P+ELY +A   FLWEGCL+L+QCC  DEP +A+KL+R                           ++W   P  +   EG   +  H   F+  G  R G+                       PLLE K   L+ ELLS K ++VL V+TLC ELQ+IADE++ AG   + +   CV  +V +AG+S   LLDAYE +N+  YP DD   LR   VM  +L  A              G+++E+VRPER+ERLAHDT+ GL+++R      AS   +D   +    EL  ++  KV   VR+
Sbjct: 1068 EHDKKLLMSIRTPGVERYLKRDPEDLFRHYMLSKEYPKAVHLMDCEARVEARSGVHVRHRVECLLKAISACHKCDLDSAQMVAPGWSLNHAKLRTMEDERDVLLVQERLLSDLKATMTPLERLAQEGRGTEGLLAELAERRRIAETWTTDIVDPSELYRQASGSFLWEGCLRLMQCCEFDEPIVAKKLIREKGRGGYLYVHVLLGGGGCGGGVRICLVVWHFYPNPLLNLEGCDRDGRHKSFFLL-GPQRPGDTP---------------------PLLEDKMSVLSQELLSHKASFVLSVETLCLELQMIADEFHEAGGSASAL---CVVEAVGRAGLSAVVLLDAYEYLNQHHYPSDDHARLRRFAVMARLLELAAAGGDGIKAAAGGVGLVSETVRPERLERLAHDTLAGLDSLRFSSSSAASAGGEDADRDAGARELLEEVRRKVDKLVRS 1497

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig1462.2770.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig1462.2770.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5J909_9PHAE	1.260e-131	52.05	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G0M6_ECTSI	1.260e-98	45.05	Nucleoporin_N domain-containing protein n=1 Tax=Ec...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig1462	contig	H-paniculata_contig1462:17781..26106 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	312.0
Seed ortholog evalue	4e-82
Seed eggNOG ortholog	2880.D7G0M6
Preferred name	NUP155
KEGG ko	ko:K14312
KEGG TC	1.I.1
KEGG Pathway	ko03013,map03013
KEGG Module	M00427
Hectar predicted targeting category	other localisation
GOs	GO:0000003,GO:0000212,GO:0000226,GO:0000280,GO:0000972,GO:0001508,GO:0001555,GO:0001654,GO:0003006,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003674,GO:0003682,GO:0005198,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005730,GO:0005737,GO:0005886,GO:0005911,GO:0006403,GO:0006405,GO:0006406,GO:0006606,GO:0006611,GO:0006810,GO:0006886,GO:0006913,GO:0006928,GO:0006936,GO:0006941,GO:0006996,GO:0006997,GO:0006998,GO:0007010,GO:0007015,GO:0007017,GO:0007049,GO:0007051,GO:0007053,GO:0007088,GO:0007096,GO:0007140,GO:0007154,GO:0007267,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007295,GO:0007300,GO:0007303,GO:0007346,GO:0007423,GO:0007444,GO:0008015,GO:0008016,GO:0008104,GO:0008150,GO:0008152,GO:0008284,GO:0009506,GO:0009507,GO:0009536,GO:0009790,GO:0009792,GO:0009888,GO:0009987,GO:0009994,GO:0010256,GO:0010467,GO:0010564,GO:0010941,GO:0012505,GO:0015031,GO:0015833,GO:0015931,GO:0016020,GO:0016032,GO:0016043,GO:0016049,GO:0016482,GO:0017038,GO:0017056,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0030029,GO:0030036,GO:0030048,GO:0030054,GO:0030154,GO:0030715,GO:0030717,GO:0031090,GO:0031503,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032386,GO:0032388,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033043,GO:0033157,GO:0033365,GO:0034399,GO:0034504,GO:0034613,GO:0035220,GO:0035295,GO:0035637,GO:0036228,GO:0040007,GO:0042127,GO:0042306,GO:0042307,GO:0042391,GO:0042886,GO:0042981,GO:0043067,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043900,GO:0043902,GO:0044057,GO:0044085,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044611,GO:0044703,GO:0045184,GO:0045477,GO:0045595,GO:0046822,GO:0046824,GO:0046907,GO:0048232,GO:0048285,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048522,GO:0048588,GO:0048589,GO:0048599,GO:0048609,GO:0048731,GO:0048856,GO:0048869,GO:0050657,GO:0050658,GO:0050789,GO:0050793,GO:0050794,GO:0051028,GO:0051049,GO:0051050,GO:0051128,GO:0051168,GO:0051169,GO:0051170,GO:0051179,GO:0051222,GO:0051223,GO:0051225,GO:0051234,GO:0051236,GO:0051239,GO:0051240,GO:0051276,GO:0051321,GO:0051641,GO:0051649,GO:0051704,GO:0051726,GO:0051783,GO:0055044,GO:0055049,GO:0055050,GO:0060047,GO:0060048,GO:0060284,GO:0060341,GO:0060429,GO:0061024,GO:0061337,GO:0061982,GO:0061988,GO:0065007,GO:0065008,GO:0070013,GO:0070192,GO:0070201,GO:0070252,GO:0070727,GO:0070925,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072594,GO:0072657,GO:0086001,GO:0086002,GO:0086003,GO:0086014,GO:0086019,GO:0086026,GO:0086065,GO:0086066,GO:0090087,GO:0090306,GO:0090316,GO:0090435,GO:0097435,GO:0140013,GO:1900180,GO:1900182,GO:1901987,GO:1901990,GO:1903046,GO:1903522,GO:1903827,GO:1903829,GO:1904589,GO:1904591,GO:1904748,GO:1904951,GO:1905475,GO:1905879,GO:1905936,GO:1905938,GO:2000241,GO:2000243
EggNOG free text desc.	protein localization to nuclear inner membrane
EggNOG OGs	COG5308@1,KOG1900@2759
COG Functional cat.	U
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko00002,ko03019
Exons	8
Model size	1580
Cds size	1188
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig1462.2770.1	prot_H-paniculata_contig1462.2770.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig1462 18114..26047 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622929163.587264-UTR-H-paniculata_contig1462:17780..18113	1622929163.587264-UTR-H-paniculata_contig1462:17780..18113	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig1462 17781..18113 -
1691480756.040898-UTR-H-paniculata_contig1462:17780..18113	1691480756.040898-UTR-H-paniculata_contig1462:17780..18113	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig1462 17781..18113 -
1622929163.8777285-UTR-H-paniculata_contig1462:26047..26106	1622929163.8777285-UTR-H-paniculata_contig1462:26047..26106	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig1462 26048..26106 -
1691480756.1316314-UTR-H-paniculata_contig1462:26047..26106	1691480756.1316314-UTR-H-paniculata_contig1462:26047..26106	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig1462 26048..26106 -

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig1462:17781..26106-
coding sequence from alignment at H-paniculata_contig1462:17781..26106-

protein sequence of mRNA_H-paniculata_contig1462.2770.1

>prot_H-paniculata_contig1462.2770.1 ID=prot_H-paniculata_contig1462.2770.1|Name=mRNA_H-paniculata_contig1462.2770.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=396bp
MKDPELLFRHFMLHKEYPKAVYVMATEAHAEQGSNMHIRDRVDCLVKAIS
ACHKCDLDSAQMVMPGWSLSHAKRQALEDEMDVMLTQERLLRNLEASMAP
LQRLKEKGRLTEDLEGELDERARVANEWTWGIAGPTELYERAMAFFLWEG
CLQLLQCCGKDEPALARKLVRSIIWREVPMYTREGEASHTHAFITRGRSR
KGEVAVDDVRLVLDDGAAFEDDGWFGPLLEKTQALAHELLSRKETYVLPV
DTLCRELQLIADEYYYAGHGEAEVPPPCVAASVRQAGVSPTALLDAYESM
NRTCYPKDDELMLRWLEVMTEVLTWACQTQQPGVLAESVRPERVERLAHD
TMRGLETVRASPRMQDPGAEYKIAELCRQLEDKVLSSVRTQSRYR*

mRNA from alignment at H-paniculata_contig1462:17781..26106-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig1462.2770.1 ID=mRNA_H-paniculata_contig1462.2770.1|Name=mRNA_H-paniculata_contig1462.2770.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8326bp|location=Sequence derived from alignment at H-paniculata_contig1462:17781..26106- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGAGCACGATAAGAGCCTTCTGTTGCGGATTAAGACGGCCGGCGTGGAG
CGCTACCTCATGAAGGACCCAGAGCTACTGTTCCGACACTTCATGCTGCA
CAAGGAGTACCCCAAAGTATGTGGAGAGTATTATTACCTACTATCGATCA
GTGTGCTCTGACTGGAGTTGATGCTGTACCACGATGATGGCGCCGTCGCC
GACCGTGATCCATGTCTAGGAAGAGTACAGTAGGAGTAAATGTTCATGTT
GTTGTTGTTGTTGTTGTTGTTGTTGTCTTAATCGAATATCGTAAAATCTG
GAGGTATCATATCAGGAAGGATGAAAACATGCTTCAAACGAGATTTATTA
TCTCGACGTCAGAGGTGTTAAGGTGTTGAAAGAACCTGTCAATTGACAGG
CATACCTTCTCCGCAATATCGTTACGACGAGTGGGCACACAAGCAATACT
CGTGGTCAGTAGCGCCATAGTTCTGTAGATAATAATCGTGCTCGAAAAAC
GTTCGCACCCCGATACATGGTGGCATCGATAACCTATCTCCGGGTTTGTT
TTAATGGTATCCATAGGCGCTTTTTCTGATTTTTATTTTTTTCCAATGCT
TGAGCCCGATCGCTCAGACCCGCTGTCTGAGGGTGACAGGTTGTGCATCT
CAGGTGCAAAAGGGGGACGTTTCTTTTACCGTGGCAGCCTCTTGCCACGG
AATTTATTATCTAATAGTGTAGAGCGAGAAGAGACAAACACCGGCTTTTT
TCGTTATGACCAATTGATAAACAAGCACTCCACAGACCGACGAAGGGGCC
AGGAGTTGTCAAAAAGGTCAGAAAGTCAGCTTTTTTGCCTGGATGTTCAA
AACGTCGAATTCCTTGACATACAGATTTGTCGTGTTTACTGCGTCGTGCG
GTGCCCGCCGTCTGCTGCAGGCGGTGTATGTAATGGCAACGGAAGCTCAC
GCAGAGCAAGGCAGCAATATGCATATTCGGGACCGCGTAGACTGTCTGGT
GAAGGCTATCTCTGCGTGTCATAAGTGCGACCTGGACTCTGCTCAGGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCTTCGGGTGGTCATTGTAC
CTTTTTGTGGTGTCCTGTATGTACTCTTTTTGGTGTATTTGTAGTTCTTG
TGTATTGTACCTTTTTTTGTTTTTTTGTAAAGTCTGTCGTGTACTGTACT
TTTTTTGGTGTCTACTACCGTTTTTTTCATATTTTCCACAACTCCCAATA
CAGCCAACCAATTTACAAAAAACCCTCGATATTTTTTTCTTGTATTTTTA
ATGTTTCACACCTCGGATAAAGGAACGCTGAAGGACCAGCGATGCCGTCA
TCCCCAAACTAATTTGCACAAATTTGCTGCCTTTTGTGTCAACGTGGCAG
ACTTGATTATGAAGTGCACTTTTTGCATTGTTGCTAATCCGATGTTCGAT
TTACTGAATGATACACCAGTACGTGACTGATGTATCGGTGTCGCCAGTTT
ATCGATGCGAGCGAAGCGAGCTAACCGTGCGAAGTACCAGGCAAACGCTT
TAGCGCGAGTCGAAACGGCCGCACCCCGGCTAGTGAGGGAGTCTCGCGGG
AGGTGCCACCAGAGGCACAATAAATAGACATTTTGAGGTTGGGGGGTGTT
AAATGAGATGACCACAGCATGTGTACATTCACTGATCGCCGATCAAGATA
TATATATATGTCGTATTGCTCGATATATGATGTATCGTTAATCCTTTGGG
GGCTCTTGATCTCTTGCCCAGGTGCGGAGTATTTGTTCACTATTTGGCCG
CTACCAAAAGAGGTGTTTGCACTTTCTCGCTCTGTTGGACATTCAAGATG
AGAAGCCACCAACACGGTCAAAAACGCCCCCAATTTTGCACATGTCTAGA
GCTGGTGTCCTCGTCATTATGCACGACTGGGTGTCGCAAACCTTTCTGTC
GGCCGTTACACAGTTCGCCTCCTAAACGGTTGATGTATCGGTGCCGGTGT
ATAGTCGTAGATGTTTCTGCATAGAAATAGATTTGTGAAGTAATTTTGTG
TTCAACCCCTCTTTCCTCTTTTTTTTTTTTTTAATTTTTAGGGATGTGTT
TCGGTCATTTGAAAGTATACAAATAGAGCGGTGGGTCGGCGAAGCCGATA
TACCGATACATCACCGATGTATTGGTAATGTATCGGTTCGAGCGAAGCGA
GCCAGCCGCACGAAGCACCAGGCGAGCGCTTTAGCGCGAGCCTCAACACC
CTCCTCCGGCTGGTGAGGAGGCCTCGCAGGAGGCAGAAAAATGAAGGATT
TTGGCTTCATCTCTCTTCAAAACGGAGGATCTCGAGTATCTTTATGGAGG
CAGCCTGACCTCGAGCTGACAGAATCCTTTTTGGAGAAAAAAAACAACTT
TCAAGCACAAAAAAATTAACGTACAAATCACACTGAGTTTGCAAAGTGTT
CGTGGGGCTACTGGGAACGAGAGCGAGAAGAGTACATGTCGGGCACAATG
TCATCGGCCTGCTCGAGGTTGCGCGGAGCTCACGCGTGTTATACGGTGCT
TCGCGGGGTGTGTTGTGCCACGCCGTTAAGGTGGTGCCGTGAGTTGTTGG
AGGATGACTAGGTCATGTGCACATTCAGTGGATAATAGCCATCCTATTAG
AGAAATGTATCGATGTATTGGAAAGACGACATATCGATATATATATATAT
AGAGAGAGAGAGATATTGGACCAACACATGATATATCGTTTTTGTAACGG
AACCGATACACAGCCCTAAGTTTTTCCTTGCGTAATTTTTTTAGTAATTA
TTTATATATATATATATATATATTCTTATTGCTTCATAATCATAAACTGT
ATTTTTTCTTTCTCCTAATTTTTATTCTGTCATCACTGATCTATTTCTTG
TCCAGATGGTGATGCCAGGATGGAGTCTAAGCCACGCGAAACGCCAGGCT
CTGGAAGACGAAATGGACGTGATGCTGACACAAGAGCGTCTTCTTCGGAA
TCTGGAGGCCAGCATGGCTCCCCTGCAGCGACTAAAGGAGAAGGGCCGGT
TGACGGAGGACCTCGAAGGTGGGTTAGAGTACAGTACACTGCGCTAAACT
GTCCACGGAAACAACCGATCAGCCGTGGACAAAAGTGTGCTGGCGATCCG
CAGGGTATGGATCAATGATGGACAAACGATCTACATATGGTATGGATATT
TTTCAAACAAACATGTATGGAGTACTAACGGTGTACCGATATTACGATAT
GCTTGTATTGTTGCAAATAAGCGATGCGAGATGTGAATGATCTGGTAGGT
CCTTACCCATTAAGCGTTCGAAATATAACTGAAGAGTACCCGCTGAAAAA
TAATTTCGATGACTTATGTATTATATTATATATACAGTCTCGTTTTGAAC
GACCCCGGTCACACCGTTTGAGATTGTGAAGCAAGGCATGTGCTTGGCTT
CAACTTATTTGTTTCTTGTCGATCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTTATCGTTAGGAGTGAGGCGTTTGAGAAGTTCTGCATA
ATTTTATAACCTGCAACATTATATTATCATATCACGTTCATCAGTGTTTA
GTATCATCACGTTCTTTCTTGTTGCATATACCACTAGACCAGGAACTCCG
CCTCCCTCGCCCACCGCGGCTACGCAAGTGGCAAACTAAACTCAGACCCC
CTCTGTCTGACGATTGGCTATCGAAATTCGCTATAATAAAAGGCACAAAG
CTCCGTCTTTCTGAGAACGTGTGGTCCACGGTCTAACAGCTAGGGCATGC
CAAACATAACTACACCCCCGTAGCTACCTCTGACTATCAACATCACGATT
ACCACGCTAACCTATTAGTTTTGGGGGGGTTTTAAACACTAACCATGTCC
CTACCGACGTCCCCCACCCCACCCCAACAAACGCGAAACGCAATGCCACA
ATATAATAGGAGAACTCGATGAGCGAGCTCGCGTGGCAAACGAATGGACT
TGGGGCATCGCTGGGCCCACGGAGCTGTACGAGAGAGCGATGGCGTTTTT
TTTGTGGGAAGGGTGTCTACAGCTGCTGCAGTGCTGTGGGAAAGACGAGC
CAGCTCTTGCGCGAAAACTGGTCCGGTGCGTTCGTATTTTTCTGATTTTG
TTTTCTGGATCATGAGTTCTTTCTCATGTACTTGAATCGAAAAAAACATT
CCCACAAAAAATACTCAAAATTTAGAATGTTGTTGTGTATTATTAGTATG
CCACTATTTCTGCTTCCGTAGAATCATGGCTACACGAGCCGGTGCATTTC
TGTTTTTGTCCTCGATATCGGAGGCTCGCTTTGCTCGCATGAATATTCGA
TATTCGGAAATTACTTTAGTACAGATTTGAAAATATGTTTCGAACCCGAA
ACGGCGCCAACGATCACCTTGCCTTGTGAAGTATATGGACACATGTGCGG
ATGTTTGTTTCTTGTACTGAAAGATTCACACGTCGGTCAAAATACGTTCT
GCAGCATCTCTAGATTTTATCATTGTAAGATGTATGCAAATGCTTGGAAA
AAATCACACACACACACACACACACACACACACACTATTAATATATATAG
AGATATATCCACTCACAATCAACAGCACGACATACCGTCCTTTCGAAACG
TTTTTTTTTATTGACAACTGGTGTATGATTTATTGGGGCTAGTTAGGAGT
ACATGGACAATATGAGCGCAGTTGGATTACTGCTTTCAGCGCAAAATGTA
CAAAACTGTAGGGGAAGTCACAAGAACGTCCAGATACCGAGATGGGGAAC
CCAGGGGGTGTTATCCGCCGTGTTGGCCTGTTGCGGGTGAAGTACAATGT
CTCTGAATACGTGAGAGGTAACATAAGAATATAATGACTACAGTCTACCC
TATTCATTCAAGACCCCCTCCTCCCCCATCGGGAGTGAAATCGTCTTTAC
CCCTCCTCAAACACGCTCGGTGCGCACGCGCGCGCGGGGGGGGGTGTTAT
GCACCGTATCAACCTGTTGCGGGCGAACTACGTTGCTGCTGAGCACCTGA
GAGGTAAAATAAGAATATAATATACGTAATCTACCCTATCAGGCTACGAC
CCCCCATACTCCCCTCGGGGGAATGAAATCGTTTCATCCCCTCCGCGAAC
ATGCTCACCGGGGGGGGGGGGGGGTATTATTCATTCTATTAGCAGTTTGC
GGGCGATCTATGACGCCTCTGAACACATGAGAGGTATAACTGGAAAAATG
ATATCCTACTGTATCGGGTTGTTATCCCACGCCCCACTACGGGGATGACA
TCGTTTATTCCCGTCCCCAAACATGCTCACGGGAGTTGGGTGTTATTCAC
CACATTAGCCTATTACGAGCAGACTACGATGCCCATGAAGACGTGAGAAG
TAACGATAAAACTTTATGTACTCAATCTATAGGTTTAGTACCACCTCCCC
CCCCTCTGGTATGAAATTATTTCATCCGCGCCTCCAACCCCCCCCACGAA
TCCCCCCGGGGGGCGAAGGGGGTTAGCCACGTTCGACTGCTGAAACTTTA
ATCAGTCGCTTGCGTCGCGGTTTTTGACCAGATTCGTACGAAAGTCATAT
CTACCCTAATTTGACAACTCCAACACATGCATGGCCATTATCCAGTCAAA
GGAAAAGTCACTTTGCCATTTGGCAAGTCGGATTCGGGTTCTCGAGTGGA
TTTCGAGTCGGACCACGTGTTTTTTTTTTCAAATTCGATTCGATTTCACA
ACGAGAACGTTTTGACCTGGACGACTGTGGATGTACTCACTGATAGAACA
TGGAAAACATGGAAAACACTATGTATGATCTCATTTCTTTGTATCTGTTG
GATGTATGAACAAAGGTCCATCATCTGGAGGGAGGTCCCAATGTACACGC
GTGAAGGCGAGGCCAGTCACACACATGCATTCATCACCCGTGGTAGAAGT
CGCAAGGGAGAGGTGGCGGTGGATGATGTACGACTAGTGCTTGACGACGG
AGCGGCTTTCGAAGACGACGGCTGGTTCGGCCCTCTGCTGGTGCGTGTCA
CTTAGTTTCCAATACGCTGGTTGGGTAGGTGGTGATGATATTGATAAATT
ATGATGATTTGATGTGGATGATGATATTTATATATACGAATGAACTCCAT
CTTCATGAACTGCCGTGCTTGCTTGGTCTTCGAAATTTAGGAGAAGACGC
AGGCGCTCGCACACGAGCTGCTGTCCCGCAAGGAGACGTACGTGCTTCCT
GTGGACACGCTTTGCCGTGAGCTGCAGCTCATCGCCGACGAGTACTACTA
CGCGGGACACGGTGAAGCAGAGGTAACTAGGGCTGCTAGTTGAAGGTTTT
GGGTTTTTTTTCTCCATCTGTTATTTTAGAATGCGCTACGCGGTTACATG
ACTCGAGAGAAACCCAAAACTCGGAACCGCAGGAAATTTGGAATCGGTTT
TTCATGAGCCATGTTACAACACTGCGATAGGAGACCGAAGACGATCGTTT
TGTTTCCGGAGTAGCTCTCGAGACCTTCCTACAAAAACAGTTTGAACAAA
TTACGATATGAGTACTGGTCGTTTTCGGTGCTATGATAGAGATGTGCGCC
GACTGGTGAGGATAAACGGTACCAACTGGCAGCCGCCCGCCGGTCAAATC
TACACGGGTTCAAATCGCCGTTTTTTCGTTTTAGTTGGGGAGTTTTTCGC
GGGTGCGCCCGGTTCAACCTTGTCCTTTCTCTGGGAATAGCGCCTCCCGA
CTTCGGTATGGAAGCATCGGAAAGAGATTTTTGCCTTAGTCTTTCGGCGG
TTAAAAAAATAAATAAATAGCGCCTCCCGAAAAAACTCGTTGTCGTGGTG
TGTACACATAAAAGCTGCCGCCAATAAAATATCGTTCGATGTAAAACCGA
CAAATTTATCTTAATTTTTTTTGGGCCAATGAAAACCCTCAGATCATGTT
CAAATTGACGTTTTGCCACGATGCATTGCTTCCAAATCACGATCAAAATA
AAGCGAGCTGAACATAATCCATTTTTTTTTTTTTAAGGGTGATTATTGGA
TTCGTTTTTTTTGCTATACATATGAAATAAAGATTACGCCTGCGCCCTGT
GAGAACCTCTCCGCCTCCCTCTCACCACCGCTGCCGCGGCGCAACCCCTT
ACCTCGTCAGGTGCCGCCGCCATGCGTTGCGGCCTCCGTTAGACAGGCGG
GAGTATCCCCGACGGCATTGCTAGATGCCTATGAATCGATGAACCGAACG
TGCTACCCGAAGGACGATGAGTTGATGTTGCGATGGCTCGAGGTCATGAC
CGAAGTGCTCACGTGGGCCTGTCAAACCCAGCAGGTGCCAGAGTGGAGCT
TTTTTGTGTTTTTTTTTTTTCATGTACGGTAGACTTTATGCCACGCTGTC
TGTCGATAGTATGTATTATCAGCAGCGCAGAAGTTGGTTTTACCCTGGTA
CCTGCCCGACCCCTGCACGGTACTTGGCTCCCGGGCTTTTCGCCAGGCTG
CAGAGGTGGTGCAGCTCTCTGTTTTGGAAGGTTGGGTGTAAGTCATGCGC
CCCGAGTGAACTGTACAGCAAAAATATGGGCATGCATATGCAGCGTTTTC
TTTTTCTTTTTCTTATGTTAACGAGGCGCCGGCACGCAGCATGACCTGGA
CCAACCAAAACCAATAAGAGACAGGGCAGCTGTACAATGGTTCGATAAGG
CCACTATAAGCGTCTACGCATAGGAAACATGTAAGTGATCCCCGCTGCCA
TCCCACCCCACCCGCGATCCCCGATTTTTTTCTCGCCTCTTCCAATAGCC
GGGCGTCCTGGCGGAGAGCGTTCGTCCCGAGAGGGTGGAGCGTTTGGCGC
ACGACACAATGCGGGGACTGGAGACTGTTCGCGCGTCGCCCCGAATGCAA
GATCCCGGAGCAGAGTACAAGATAGCCGAACTTTGCCGCCAGCTAGAGGA
TAAAGTTCTGTCCTCTGTCCGCACCCAGAGTCGGTACCGTTAGGGCGTTG
GTATTGTTGTCGGAAGAGAGGACGGAGGGGGAGGGGGAGTACTCATGTTT
CGCATACCGTCGTTGTTGGACCGTTGACCATATGACCTCGAGAAGACGAA
GCTTTGTTCTCGCGCGGTGATCCTACCCCCCGAAGGAGGAGGGGGATAGA
CGTTGTGAGCTACCAACGAGTACCTGGTACGACGGATGCGCATCTAACTT
GCGATGAACCTCTTGAGGGATGTTTCCAGAAAAATCTACCACGTGTATGC
TGAGTTAATGTAACCTGCAATCGGTCGTGGCTAGATATAACTGGTTGAGA
GGTGTTCGGAGGAGGGATGGAGGAGG

Coding sequence (CDS) from alignment at H-paniculata_contig1462:17781..26106-

>mRNA_H-paniculata_contig1462.2770.1 ID=mRNA_H-paniculata_contig1462.2770.1|Name=mRNA_H-paniculata_contig1462.2770.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2376bp|location=Sequence derived from alignment at H-paniculata_contig1462:17781..26106- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGGACCCAGAGCTACTGTTCCGACACTTCATGCTGCACAAGGAGTA
CCCCAAAATGAAGGACCCAGAGCTACTGTTCCGACACTTCATGCTGCACA
AGGAGTACCCCAAAGCGGTGTATGTAATGGCAACGGAAGCTCACGCAGAG
CAAGGCAGCAATATGCATATTCGGGACCGCGTAGACTGTCTGGTGAAGGC
TATCTCTGCGTGTCATAAGTGCGACCTGGACTCTGCTCAGGCGGTGTATG
TAATGGCAACGGAAGCTCACGCAGAGCAAGGCAGCAATATGCATATTCGG
GACCGCGTAGACTGTCTGGTGAAGGCTATCTCTGCGTGTCATAAGTGCGA
CCTGGACTCTGCTCAGATGGTGATGCCAGGATGGAGTCTAAGCCACGCGA
AACGCCAGGCTCTGGAAGACGAAATGGACGTGATGCTGACACAAGAGCGT
CTTCTTCGGAATCTGGAGGCCAGCATGGCTCCCCTGCAGCGACTAAAGGA
GAAGGGCCGGTTGACGGAGGACCTCGAAGATGGTGATGCCAGGATGGAGT
CTAAGCCACGCGAAACGCCAGGCTCTGGAAGACGAAATGGACGTGATGCT
GACACAAGAGCGTCTTCTTCGGAATCTGGAGGCCAGCATGGCTCCCCTGC
AGCGACTAAAGGAGAAGGGCCGGTTGACGGAGGACCTCGAAGGAGAACTC
GATGAGCGAGCTCGCGTGGCAAACGAATGGACTTGGGGCATCGCTGGGCC
CACGGAGCTGTACGAGAGAGCGATGGCGTTTTTTTTGTGGGAAGGGTGTC
TACAGCTGCTGCAGTGCTGTGGGAAAGACGAGCCAGCTCTTGCGCGAAAA
CTGGTCCGGAGAACTCGATGAGCGAGCTCGCGTGGCAAACGAATGGACTT
GGGGCATCGCTGGGCCCACGGAGCTGTACGAGAGAGCGATGGCGTTTTTT
TTGTGGGAAGGGTGTCTACAGCTGCTGCAGTGCTGTGGGAAAGACGAGCC
AGCTCTTGCGCGAAAACTGGTCCGGTCCATCATCTGGAGGGAGGTCCCAA
TGTACACGCGTGAAGGCGAGGCCAGTCACACACATGCATTCATCACCCGT
GGTAGAAGTCGCAAGGGAGAGGTGGCGGTGGATGATGTACGACTAGTGCT
TGACGACGGAGCGGCTTTCGAAGACGACGGCTGGTTCGGCCCTCTGCTGG
TCCATCATCTGGAGGGAGGTCCCAATGTACACGCGTGAAGGCGAGGCCAG
TCACACACATGCATTCATCACCCGTGGTAGAAGTCGCAAGGGAGAGGTGG
CGGTGGATGATGTACGACTAGTGCTTGACGACGGAGCGGCTTTCGAAGAC
GACGGCTGGTTCGGCCCTCTGCTGGAGAAGACGCAGGCGCTCGCACACGA
GCTGCTGTCCCGCAAGGAGACGTACGTGCTTCCTGTGGACACGCTTTGCC
GTGAGCTGCAGCTCATCGCCGACGAGTACTACTACGCGGGACACGGTGAA
GCAGAGGAGAAGACGCAGGCGCTCGCACACGAGCTGCTGTCCCGCAAGGA
GACGTACGTGCTTCCTGTGGACACGCTTTGCCGTGAGCTGCAGCTCATCG
CCGACGAGTACTACTACGCGGGACACGGTGAAGCAGAGGTGCCGCCGCCA
TGCGTTGCGGCCTCCGTTAGACAGGCGGGAGTATCCCCGACGGCATTGCT
AGATGCCTATGAATCGATGAACCGAACGTGCTACCCGAAGGACGATGAGT
TGATGTTGCGATGGCTCGAGGTCATGACCGAAGTGCTCACGTGGGCCTGT
CAAACCCAGCAGGTGCCGCCGCCATGCGTTGCGGCCTCCGTTAGACAGGC
GGGAGTATCCCCGACGGCATTGCTAGATGCCTATGAATCGATGAACCGAA
CGTGCTACCCGAAGGACGATGAGTTGATGTTGCGATGGCTCGAGGTCATG
ACCGAAGTGCTCACGTGGGCCTGTCAAACCCAGCAGCCGGGCGTCCTGGC
GGAGAGCGTTCGTCCCGAGAGGGTGGAGCGTTTGGCGCACGACACAATGC
GGGGACTGGAGACTGTTCGCGCGTCGCCCCGAATGCAAGATCCCGGAGCA
GAGTACAAGATAGCCGAACTTTGCCGCCAGCTAGAGGATAAAGTTCTGTC
CTCTGTCCGCACCCAGAGTCGGTACCGTTAGCCGGGCGTCCTGGCGGAGA
GCGTTCGTCCCGAGAGGGTGGAGCGTTTGGCGCACGACACAATGCGGGGA
CTGGAGACTGTTCGCGCGTCGCCCCGAATGCAAGATCCCGGAGCAGAGTA
CAAGATAGCCGAACTTTGCCGCCAGCTAGAGGATAAAGTTCTGTCCTCTG
TCCGCACCCAGAGTCGGTACCGTTAG