prot_H-paniculata_contig1462.2769.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1462.2769.1
Unique Nameprot_H-paniculata_contig1462.2769.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length219
Homology
BLAST of mRNA_H-paniculata_contig1462.2769.1 vs. uniprot
Match: D7FZB4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZB4_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 1.170e-35
Identity = 70/116 (60.34%), Postives = 87/116 (75.00%), Query Frame = 0
Query:   95 EEKLAFMTKILDAKPPPKPVLTPEEKQRNMEIGKRYNKMMAKEHNDRMADYTLKIRLRDDAINNLPELLQHAARQKDTNPPPTNRRMFSFTPPIPGYNPRDYVKEEESDDLDIGAQ 210
            ++K   + K+LDA+P P P L+ EEKQRN +IG+RYN  MA  HN+RMAD T KI+LRDDAI +LPELLQHAARQ D NPPP NRR+ ++TPPIPG++ +DY     SDD D  AQ
Sbjct:   70 DKKTMTLLKLLDARPEPMPELSAEEKQRNFDIGRRYNSKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFDKKDYGL---SDDEDADAQ 182          
BLAST of mRNA_H-paniculata_contig1462.2769.1 vs. uniprot
Match: A0A1Z5J8W3_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J8W3_FISSO)

HSP 1 Score: 60.5 bits (145), Expect = 5.900e-8
Identity = 45/138 (32.61%), Postives = 75/138 (54.35%), Query Frame = 0
Query:   73 SPRKKEMQKNARKTKDHKKASNEEKLAFMTKI----LDAKPPPKPVLTPEEKQRNMEIGKRYNKMMAKEHNDRMADYTLKIRLRDDAINNLPEL--LQHAARQKDTNPPPTNRRMFSFTPPIPGYNPRDYVKEEESDD 204
            +P++K+ + N +K K    A  +   +   K+    LDA    +P ++ EEK+R  +IG+ +     ++HN+   D T KI L+  AI  LP    L+ AA   +T  PP  R++  +TPPIPG++P  +++  E DD
Sbjct:   28 APKRKQQKANKKKKKGTGGAEQDSMASKNMKLVMAALDAPMKLEPAVSEEEKERRYQIGRNHVIGRFRQHNEIDHDLTCKIHLKQHAIRMLPRNSPLRDAALSMNTTMPPPWRQLPVWTPPIPGFDPSQFIERVEEDD 165          
BLAST of mRNA_H-paniculata_contig1462.2769.1 vs. uniprot
Match: A0A4D9D834_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D834_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.840e-7
Identity = 41/101 (40.59%), Postives = 54/101 (53.47%), Query Frame = 0
Query:   97 KLAFMTKILDAKPPPKPVLTPEEKQRNME-IGKRYNKMMAKEHNDRMADYTLKIRLRDDAINNLPELLQHAARQKDTNPPPTNRRMFSFTPPIPGYNPRDY 196
            K A+  KILDA P        E++Q   + IG RYN    +    +  D   KI+L+ +AIN LPE LQ  AR  D  P P +RR+ + TPPIPG+    Y
Sbjct:   33 KNAWYIKILDAPPGLLAKGVSEDQQAKFQAIGHRYNVEYNRRAARQAGDLHRKIKLKQEAINALPEALQKEARTLDLTPFPASRRITTLTPPIPGFEAGKY 133          
BLAST of mRNA_H-paniculata_contig1462.2769.1 vs. uniprot
Match: B7FP26_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FP26_PHATC)

HSP 1 Score: 57.4 bits (137), Expect = 8.280e-7
Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = 0
Query:   98 LAFMTKILDAKPPPKPVLTPEEKQRNMEIGKRYNKMMAKEHNDRMADYTLKIRLRDDAINNLPE--LLQHAARQKDTNPPPTNRRMFSFTPPIPGYNPRDYVKEEE 201
            L  +   LDA    +P +   EK R  +IG+ Y     + HN+   D T KI ++  A+N LP+   L+  A + DT  PP  R +  +TPPIPG++P  +V  EE
Sbjct:   63 LDLVLAALDAPSSKEPPIDDAEKARRYQIGRNYVIGSFERHNEIDHDLTCKIHIKQHALNMLPKGTKLREEALKTDTKSPPLWRNLPVWTPPIPGFDPSQFVDREE 168          
BLAST of mRNA_H-paniculata_contig1462.2769.1 vs. uniprot
Match: A0A7S2U755_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U755_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 3.950e-5
Identity = 39/114 (34.21%), Postives = 66/114 (57.89%), Query Frame = 0
Query:   98 LAFMTKILDA---KPPPKPVLTPEEKQRNMEIGKRYNKMMAKEHNDRMADYTLKIRLRDDAINNLPE--LLQHAARQKDT----NPPPTNRRMFSFTPPIPGYNPRDYVKEEES 202
            +  +TK L+    KP P P  + EE  R  EIG+ YN    K+HN    D T K+++++ AI+ LP+   L+  A + D     N PP  R + ++TPPIPG++P+ ++ ++++
Sbjct:   71 VTLITKALNDPQNKPNPPPA-SEEEMARRSEIGRNYNIGTFKQHNALNHDLTCKLKMKNHAISMLPKNSTLREEALKIDMDDIENHPPKWRSIPTWTPPIPGFDPKKFILKDDN 183          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1462.2769.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FZB4_ECTSI1.170e-3560.34Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1Z5J8W3_FISSO5.900e-832.61Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A4D9D834_9STRA1.840e-740.59Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
B7FP26_PHATC8.280e-735.85Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S2U755_9STRA3.950e-534.21Hypothetical protein n=1 Tax=Attheya septentrional... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 76..96
NoneNo IPR availablePANTHERPTHR13359:SF239S RIBOSOMAL PROTEIN L40, MITOCHONDRIALcoord: 75..196
IPR03914539S ribosomal protein L40, mitochondrialPANTHERPTHR1335939S RIBOSOMAL PROTEIN L40, MITOCHONDRIALcoord: 75..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1462contigH-paniculata_contig1462:6892..14431 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1462.2769.1mRNA_H-paniculata_contig1462.2769.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1462 6851..15256 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1462.2769.1 ID=prot_H-paniculata_contig1462.2769.1|Name=mRNA_H-paniculata_contig1462.2769.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=219bp
MLRATSSRAMCVRSPVATSGACIAPTRKLGSVDYQQHDDARSVRGFGRFT
RAAGGRVAYDDRQRRGFGTRQISPRKKEMQKNARKTKDHKKASNEEKLAF
MTKILDAKPPPKPVLTPEEKQRNMEIGKRYNKMMAKEHNDRMADYTLKIR
LRDDAINNLPELLQHAARQKDTNPPPTNRRMFSFTPPIPGYNPRDYVKEE
ESDDLDIGAQEFEEGESR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039145MRPL40