mRNA_H-paniculata_contig1461.2765.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1461.2765.1 vs. uniprot
Match: D7FJR7_ECTSI (PPIase cyclophilin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJR7_ECTSI) HSP 1 Score: 238 bits (606), Expect = 1.970e-71 Identity = 114/207 (55.07%), Postives = 149/207 (71.98%), Query Frame = 3 Query: 3 VYHEWAPLGAQRFVNLVEDDFFTDVSFFRCVKNFLVQFGISS--DEKKKDYWRNEGPIDDDPSQGREFKRGMLSYAGGGQNTRTTQLFITFKDLSFLGSPKSPWEVPLGVVTEGMETVIDKLYNGYGDQEGFNPEGVNQGKLQREGNSYLRENFPQISYFKGCKVVADTHPSQLSGEVHAVETKEDGGSNLMIAFFPALMVLMAYII 617 VYH W+P GA+RFV+LV+DD+FTDV+ FRCVKNFLVQFGIS KK +WR +GPI DDP+ FKRGMLS+AG G N+R TQ+FITF D+ LG K+PWE PLG+VT+GM+TV+DK Y GYGDQ+ FN +G+NQG LQ GN+YLRE FP+ISY K C+VV +T P + + + ++ GG + P +M+ +I+ Sbjct: 37 VYHSWSPNGAERFVDLVKDDYFTDVALFRCVKNFLVQFGISPYVSSPKKKFWREKGPIKDDPNLQISFKRGMLSFAGSGPNSRGTQVFITFADIPHLG--KTPWETPLGIVTQGMDTVVDKFYTGYGDQQPFNQDGINQGTLQSRGNAYLREEFPEISYLKECRVVGETVPEEHASARVEKQQEKPGGEYGDVLRPPPVMMKDEFIV 241
BLAST of mRNA_H-paniculata_contig1461.2765.1 vs. uniprot
Match: A0A7S3MFS0_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MFS0_9STRA) HSP 1 Score: 180 bits (457), Expect = 1.800e-50 Identity = 92/181 (50.83%), Postives = 119/181 (65.75%), Query Frame = 3 Query: 3 VYHEWAPLGAQRFVNLVEDDFFTDVSFFRCVKNFLVQFGISSDEKKKDYWRNEGPIDDDPSQGREFKRGMLSYAGGGQNTRTTQLFITFKDLSFLGSPKSPWEVPLGVVTEGMETVIDKLYNGYGDQEGFNPEGVNQGKLQREGNSYLRENFPQISYFKGCKVV----ADTHPSQLSGEVH 533 +Y EW+PLGA+RF++LV+DDFFTD++FFRCV+ FL QFGIS KK + R E P DDP+ K+ LS+AGGG NTR+TQLFI F+DL FLG K PWE P G V EG +T +D LY YGD F +G +Q K+ GN+Y+RE FP++ + K C +V + P EVH Sbjct: 36 IYKEWSPLGAERFLDLVKDDFFTDIAFFRCVRRFLTQFGISDVPSKKHWHREEIP--DDPNLNLGIKKNYLSFAGGGPNTRSTQLFIAFEDLDFLG--KEPWETPFGQVIEGQQT-LDSLYKDYGDIPPFG-KGPDQQKIHNRGNAYVREKFPKVDFIKSCHMVEPPKVEEKPIVAQSEVH 210
BLAST of mRNA_H-paniculata_contig1461.2765.1 vs. uniprot
Match: A0A7S1T0Y9_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T0Y9_9CHLO) HSP 1 Score: 174 bits (440), Expect = 6.660e-47 Identity = 84/164 (51.22%), Postives = 114/164 (69.51%), Query Frame = 3 Query: 3 VYHEWAPLGAQRFVNLVEDDFFTDVSFFRCVKNFLVQFGISSDEKKKDYWRNEGPIDDDPSQGREFKRGMLSYAGGGQNTRTTQLFITFKDLSFLGSPKSPWEVPLGVVTEGMETVIDKLYNGYGDQEGFNPEGVNQGKLQREGNSYLRENFPQISYFKGCKVV 494 V+ EWAPLGA RF+ LVE FF DV+ FR V NFLVQFGI++D + W+++G I DDPS G KRG +++AG GQN+RTTQ++I F+D + LG K+ WE P VTEGM+ V+D+ Y+GYGD E F + GK+ GNSY+++ FPQ+ Y C+V+ Sbjct: 44 VHPEWAPLGAARFLELVESGFFVDVALFRVVPNFLVQFGIAADPEVTKKWQSKGNIMDDPSIGTPVKRGTIAFAGSGQNSRTTQMWIAFQDSAHLG--KAFWETPFAQVTEGMD-VVDRFYSGYGDMEAFGGHCPDSGKMSTLGNSYVKKEFPQMDYITSCRVL 204
BLAST of mRNA_H-paniculata_contig1461.2765.1 vs. uniprot
Match: I2CPH7_NANGC (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=I2CPH7_NANGC) HSP 1 Score: 173 bits (438), Expect = 1.140e-46 Identity = 89/161 (55.28%), Postives = 106/161 (65.84%), Query Frame = 3 Query: 12 EWAPLGAQRFVNLVEDDFFTDVSFFRCVKNFLVQFGISSDEKKKDYWRNEGPIDDDPSQGREFKRGMLSYAGGGQNTRTTQLFITFKDLSFLGSPKSPWEVPLGVVTEGMETVIDKLYNGYGDQEGFNPEGVNQGKLQREGNSYLRENFPQISYFKGCKVV 494 EWAP GA+RF+ LV +FTDV FFR V FL QFGI + WR EG I DDPSQ R+ RG LS+AG G NTR TQLFI D S+LG KSPWEVP+G V EGM+ VID LY GYG+ FN EGV Q K+ + YLR +FP++ Y K C ++ Sbjct: 57 EWAPFGAERFLQLVASGYFTDVPFFRVVPGFLTQFGIPPPSAVRKRWREEGSIPDDPSQNRQILRGYLSFAGAGPNTRDTQLFIALADSSWLG--KSPWEVPVGRVIEGMD-VIDALYAGYGEISPFNKEGVEQYKIWAD-EDYLRRDFPKLDYMKDCAII 213
BLAST of mRNA_H-paniculata_contig1461.2765.1 vs. uniprot
Match: A0A7R9Y723_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y723_9VIRI) HSP 1 Score: 162 bits (409), Expect = 2.730e-42 Identity = 82/175 (46.86%), Postives = 108/175 (61.71%), Query Frame = 3 Query: 18 APLGAQRFVNLVED-DFFTDVSFFRCVKNFLVQFGISSDEKKKDYWRNEGPIDDDPSQGREFKRGMLSYAGGGQNTRTTQLFITFKDLSFLGSPKSPWEVPLGVVT-EGMETVIDKLYNGYGDQEGFNPEGVNQGKLQREGNSYLRENFPQISYFKGCKVVADTHPSQLSGEVHA 536 APLGA RF+++V D DFF VKNF+ Q GI D ++ W G I DDP G KRG LS+AGGG+NTR+TQ FITF D LG +PWEV G + ME+ D LY GYG+ E FN EG++Q ++Q+EG+ Y+R FP +++GC V +PS+ + E HA Sbjct: 53 APLGAARFLDMVRDPDFFXXXXXXXTVKNFISQTGIPGDAATRERWARAGNIQDDPPGG-HLKRGELSFAGGGKNTRSTQFFITFNDSKHLGD--APWEVAFGYIEPSSMESTADHLYAGYGEMEPFNKEGISQSRIQKEGSDYVRREFPNTDFWRGCHVAVRRNPSRAAAEAHA 224
BLAST of mRNA_H-paniculata_contig1461.2765.1 vs. uniprot
Match: A0A7S1R7D7_ALECA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1R7D7_ALECA) HSP 1 Score: 154 bits (390), Expect = 6.090e-41 Identity = 78/169 (46.15%), Postives = 113/169 (66.86%), Query Frame = 3 Query: 3 VYHEWAPLGAQRFVNLVEDDFFTDVSFFRCVKNFLVQFGISSDEKKKDYWRNEGPIDDDPSQGREFKRGMLSYAGGGQNTRTTQLFITFKDLSFLGSPKSPWEVPLGVVTEGMETVIDKLYNGYGDQEGFNPEGVNQGKLQREGNSYLRENFPQISYFKGCKVV-ADTH 506 VY EW+P GA+ F++LV+ ++TD++ FR V NFLVQFGIS+D + ++ I+DDPS G F+RG LSYAGGG N+RT Q+FI+F LG KSPWE P G V++ ++ ++Y GYGD + +G + +Q+ GN Y+R+ FP+I + + CKVV A +H Sbjct: 30 VYREWSPNGAEHFLDLVKAGWYTDIALFRAVPNFLVQFGISTDSAMTQKYGSQ-TIEDDPSLGLPFERGTLSYAGGGPNSRTNQVFISFGQNRGLG--KSPWETPFGHVSKHSMDILSQIYTGYGDMPPWG-KGPSPSLIQQHGNKYVRDEFPKIDFIRSCKVVDASSH 194
BLAST of mRNA_H-paniculata_contig1461.2765.1 vs. uniprot
Match: A0A6B2LG42_9EUKA (PPIase cyclophilin-type domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LG42_9EUKA) HSP 1 Score: 155 bits (391), Expect = 1.430e-40 Identity = 77/166 (46.39%), Postives = 113/166 (68.07%), Query Frame = 3 Query: 3 VYHEWAPLGAQRFVNLVEDDFFTDVSFFRCVKNFLVQFGISSDEKKKDYWRNEGPIDDDPSQGREFKRGMLSYAGGGQNTRTTQLFITFKDLSFLGSPKSPWEVPLGVVTEGMETVIDKLYNGYGDQEGFNPEGVNQGKLQREGNSYLRENFPQISYFKGCKVVAD 500 VY +WAP+G+ RF+ LV D++FT FFR VK FLVQFGI +D K W ++GPI+DDP +G FKRG LS+AG G+++RTT+LF+ + D + G+ + WEVP GVV + M+ V D++ + YGD + +G +Q +L GN+YL ENFP++ Y C + ++ Sbjct: 15 VYPDWAPIGSDRFLELVRDNYFTKSPFFRVVKGFLVQFGIPADPSKWKEWHDKGPINDDPPKGVSFKRGYLSFAGYGEDSRTTELFVAYSDENGFGNTR--WEVPFGVVQD-MD-VFDQINDEYGDVPPYG-QGPDQQQLYLRGNAYLTENFPKMDYISYCSIESE 175
BLAST of mRNA_H-paniculata_contig1461.2765.1 vs. uniprot
Match: A0A835YQT8_9STRA (PPIase cyclophilin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQT8_9STRA) HSP 1 Score: 152 bits (383), Expect = 2.960e-39 Identity = 82/186 (44.09%), Postives = 104/186 (55.91%), Query Frame = 3 Query: 3 VYHEWAPLGAQRFVNLVEDDFFTDVSFFRCVKNFLVQFGISSDEKKK--DYWRNEGPI--DDDPSQGREFKRGMLSYAGGGQNTRTTQLFITFKDLSFLGSPKSPWEVPLGVVTEGMETVIDKLYNGYGDQEGFNPEGVNQGKLQREGNSYLRENFPQISYFKGCKVV-ADTHPSQLSGEVHAVET 545 V HEWAPLGA RFV ++ TD++ FR K+F+VQ G+ W P DD P FK GM+S+AGGG ++R T FI + D FLG SPWE P GVV GM V+ Y+GYG+ + FNP GVNQ + EGN+YLR FP++ Y K C +V A P Q A+ T Sbjct: 46 VRHEWAPLGADRFVAMIASGLMTDLALFRVDKDFIVQTGMCGATAPGVCAQWAELFPEFPDDRPHPRLPFKDGMVSFAGGGDDSRATDFFIAYADSEFLGG--SPWETPFGVVVGGMGEVVRGFYDGYGEMQPFNPAGVNQDLINEEGNAYLRREFPKLDYIKSCAIVGAPRRPVQRGSATGAMRT 229
BLAST of mRNA_H-paniculata_contig1461.2765.1 vs. uniprot
Match: A0A1F9Z9Q9_9BACT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Elusimicrobia bacterium RIFOXYB2_FULL_62_6 TaxID=1797970 RepID=A0A1F9Z9Q9_9BACT) HSP 1 Score: 144 bits (363), Expect = 4.180e-37 Identity = 81/166 (48.80%), Postives = 107/166 (64.46%), Query Frame = 3 Query: 3 VYHEWAPLGAQRFVNLVEDDFFTDVSFFRCVKNFLVQFGISSDEKKKDYWRNEGPIDDDPSQGREFKRGMLSYAGGGQNTRTTQLFITFKDLSFLGSPKSPWEVPLGVVTEGMETVIDKLYNGYGD--QEGFNPEGVNQGKLQREGNSYLRENFPQISYFKGCKVV 494 VY +WAPLGA RF NLV+ +FTD++FFR V F+VQFGI D WR E I DDP + K G L+YA G +TRTTQLFI F + +FL S P P G VTEGM +V+D LY+GYG+ G P+ QG++Q EGN+YL+++FP++ Y +V+ Sbjct: 33 VYKDWAPLGADRFYNLVKAGYFTDIAFFRVVSGFMVQFGIHGDPAVSAKWR-EARIQDDPVKQSNAK-GNLTYAMAGPDTRTTQLFINFGNNAFLDSQGFP---PFGKVTEGM-SVVDSLYSGYGEGAPRGMGPD---QGRIQMEGNAYLKKDFPKMDYILSAEVL 189
BLAST of mRNA_H-paniculata_contig1461.2765.1 vs. uniprot
Match: A0A2R5GIZ6_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIZ6_9STRA) HSP 1 Score: 146 bits (369), Expect = 2.370e-36 Identity = 78/210 (37.14%), Postives = 113/210 (53.81%), Query Frame = 3 Query: 3 VYHEWAPLGAQRFVNLVEDDFFTDVSFFRCVKNFLVQFGISSDEKKKDYWRNEGPIDDDPSQGREFKRGMLSYAGGGQNTRTTQLFITFKDLSFLGSPKSPWEVPLGVV-TEGMETVIDKLYNGYGDQEGFNPEGVNQGKLQREGNSYLRENFPQISYFKGCKVVADTHPSQLSGEVHAVE-----TKEDGGSNLMIAFFPALMVLMAYI 614 V WAP+GA+RF+NLV++ FF FR V+ FLVQFG+SSD + + W + + DDP QG +RG L++AG G+N+R TQ+FI D ++ PWE P V E + V+ L YGD + FN +GV+ GK+ R G SYL + FP + Y C+ + H + A E +D + L+ L ++ YI Sbjct: 30 VVPSWAPVGAERFLNLVDEGFFDGAPLFRAVRGFLVQFGLSSDPEANNRWGHL-TLPDDPKQGVRIRRGTLAFAGSGKNSRATQMFIALTDKAWPRLGSEPWETPFAYVPAEDYQAVVSLLNTEYGDIKPFNKQGVDPGKIWRHGMSYLEDGFPNLDYLAYCRRLPKHHLGFADSIMQAQEDFANAAPDDASTRLLYVLAILLAIMTCYI 238 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1461.2765.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1461.2765.1 >prot_H-paniculata_contig1461.2765.1 ID=prot_H-paniculata_contig1461.2765.1|Name=mRNA_H-paniculata_contig1461.2765.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=149bp MLSYAGGGQNTRTTQLFITFKDLSFLGSPKSPWEVPLGVVTEGMETVIDKback to top mRNA from alignment at H-paniculata_contig1461:2043..8300+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1461.2765.1 ID=mRNA_H-paniculata_contig1461.2765.1|Name=mRNA_H-paniculata_contig1461.2765.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6258bp|location=Sequence derived from alignment at H-paniculata_contig1461:2043..8300+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1461:2043..8300+ >mRNA_H-paniculata_contig1461.2765.1 ID=mRNA_H-paniculata_contig1461.2765.1|Name=mRNA_H-paniculata_contig1461.2765.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=894bp|location=Sequence derived from alignment at H-paniculata_contig1461:2043..8300+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |