prot_H-paniculata_contig146.2755.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig146.2755.1
Unique Nameprot_H-paniculata_contig146.2755.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1121
Homology
BLAST of mRNA_H-paniculata_contig146.2755.1 vs. uniprot
Match: D7FN20_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN20_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 1.940e-31
Identity = 69/78 (88.46%), Postives = 73/78 (93.59%), Query Frame = 0
Query:    1 MYAAACSFDKWIRLFDFYSGKCLAKVAGHSELATGVRFTPDGRRLVSTGGDGVMFVWRLSSALQQAMRDRMSELRTSG 78
            MYAAACSFDKWIRLFDFYSG+CLAKVAGHSELATGVRFTPDGRRLV+TGGDGVMFVWRLSS L ++MRDRM ELR  G
Sbjct: 1067 MYAAACSFDKWIRLFDFYSGECLAKVAGHSELATGVRFTPDGRRLVTTGGDGVMFVWRLSSELHESMRDRMCELRPGG 1144          
BLAST of mRNA_H-paniculata_contig146.2755.1 vs. uniprot
Match: A0A836CL69_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL69_9STRA)

HSP 1 Score: 126 bits (316), Expect = 6.770e-31
Identity = 57/74 (77.03%), Postives = 65/74 (87.84%), Query Frame = 0
Query:    1 MYAAACSFDKWIRLFDFYSGKCLAKVAGHSELATGVRFTPDGRRLVSTGGDGVMFVWRLSSALQQAMRDRMSEL 74
            +YAA CSFDKWIRLFDFYSG+CLA+V+GHSEL TGVRFT DGRRL+S GGDG MFVWRLS  L +AM DR++EL
Sbjct:    1 IYAATCSFDKWIRLFDFYSGRCLARVSGHSELVTGVRFTQDGRRLISIGGDGCMFVWRLSDELHRAMSDRLAEL 74          
BLAST of mRNA_H-paniculata_contig146.2755.1 vs. uniprot
Match: A0A7S2CJK0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CJK0_9STRA)

HSP 1 Score: 113 bits (283), Expect = 2.990e-25
Identity = 50/74 (67.57%), Postives = 60/74 (81.08%), Query Frame = 0
Query:    1 MYAAACSFDKWIRLFDFYSGKCLAKVAGHSELATGVRFTPDGRRLVSTGGDGVMFVWRLSSALQQAMRDRMSEL 74
            MY A CSFDKWIRLFDFYSG+CLA+VAGH+EL TG+RF+ DG RL+S GGDG +FVW+L   L  AM +R+ EL
Sbjct:   77 MYTATCSFDKWIRLFDFYSGRCLAQVAGHAELVTGLRFSADGTRLLSVGGDGCIFVWKLGGGLVSAMAERLQEL 150          
BLAST of mRNA_H-paniculata_contig146.2755.1 vs. uniprot
Match: A0A7S2AWM8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AWM8_9STRA)

HSP 1 Score: 108 bits (271), Expect = 4.510e-23
Identity = 45/73 (61.64%), Postives = 62/73 (84.93%), Query Frame = 0
Query:    1 MYAAACSFDKWIRLFDFYSGKCLAKVAGHSELATGVRFTPDGRRLVSTGGDGVMFVWRLSSALQQAMRDRMSE 73
            MYAA CSFD+W+RLFD +SG+CLA+V GH+EL TG+RF+ DG+RL+S GGDG +FVW+L+S + QA+ +R+ E
Sbjct:  141 MYAATCSFDRWVRLFDLFSGRCLAQVGGHAELITGIRFSSDGQRLLSVGGDGCIFVWKLASQITQAIGERLEE 213          
BLAST of mRNA_H-paniculata_contig146.2755.1 vs. uniprot
Match: A0A7S2S3R8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S3R8_9STRA)

HSP 1 Score: 115 bits (288), Expect = 2.930e-22
Identity = 48/74 (64.86%), Postives = 64/74 (86.49%), Query Frame = 0
Query:    1 MYAAACSFDKWIRLFDFYSGKCLAKVAGHSELATGVRFTPDGRRLVSTGGDGVMFVWRLSSALQQAMRDRMSEL 74
            MY A CSFDKWIRLFDFYSG C+A+VAGH+EL TG++FTPDG+RL+S GGDG +FVW+L+SA+ + +++R  E+
Sbjct:  300 MYTATCSFDKWIRLFDFYSGACIAQVAGHAELVTGLKFTPDGKRLISIGGDGCIFVWKLNSAIARGIQEREKEI 373          
BLAST of mRNA_H-paniculata_contig146.2755.1 vs. uniprot
Match: A0A7S3CYC9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3CYC9_9EUKA)

HSP 1 Score: 94.4 bits (233), Expect = 3.160e-17
Identity = 44/76 (57.89%), Postives = 57/76 (75.00%), Query Frame = 0
Query:    4 AACSFDKWIRLFDFYSGKCLAKVAGHSELATGVRFTPDGRRLVSTGGDGVMFVWRLSSALQQAMRDRMSELRTSGN 79
            A    DK++RL DF SG+CL +V GHSEL TG++FTPD RRL+S  GDG MFVW+L S L +AM DR++EL  +G+
Sbjct:  116 ATSGSDKFVRLHDFLSGECLVRVGGHSELITGLKFTPDCRRLISVAGDGCMFVWKLRSDLTRAMLDRLAELFPAGH 191          
BLAST of mRNA_H-paniculata_contig146.2755.1 vs. uniprot
Match: A0A6H5L4C9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4C9_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 1.680e-16
Identity = 48/59 (81.36%), Postives = 50/59 (84.75%), Query Frame = 0
Query:    1 MYAAACSFDK--------WIRLFDFYSGKCLAKVAGHSELATGVRFTPDGRRLVSTGGD 51
            MYAAACSFDK        WIRLFDFYSG+CLAKVAGHSELATGVRFTPDGRRLV+TG D
Sbjct:  452 MYAAACSFDKVCVRCSIVWIRLFDFYSGECLAKVAGHSELATGVRFTPDGRRLVTTGDD 510          
BLAST of mRNA_H-paniculata_contig146.2755.1 vs. uniprot
Match: A0A7S1UAY3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UAY3_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 2.280e-15
Identity = 37/75 (49.33%), Postives = 55/75 (73.33%), Query Frame = 0
Query:    1 MYAAACSFDKWIRLFDFYSGKCLAKVAGHSELATGVRFTPDGRRLVSTGGDGVMFVWRLSSALQQAMRDRMSELR 75
            +Y A CS+D+W+R+ DFYSG+ +A+ AGH E+ T   FTPDG+ LV+ G DGV+F W+L   ++ A+ DR+ EL+
Sbjct:  562 LYVATCSYDRWVRITDFYSGRVVARAAGHGEVVTAAAFTPDGQNLVTAGADGVIFSWKLPPHVRTAVSDRLQELK 636          
BLAST of mRNA_H-paniculata_contig146.2755.1 vs. uniprot
Match: A0A0L0HT87_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HT87_SPIPD)

HSP 1 Score: 91.7 bits (226), Expect = 6.830e-15
Identity = 46/84 (54.76%), Postives = 59/84 (70.24%), Query Frame = 0
Query:    2 YAAACSFDKWIRLFDFYSGKCLAKVA-GHSELATGVRFTPDGRRLVSTGGDGVMFVWRLSSALQQAMRDRMSELRTSGNSGYRA 84
            YAA  + DK IR+FDFYSG CL +VA GHSEL TGV+FT D + L+STG DG +FVW+LS  + Q M+ R+ +   SGN   R+
Sbjct:  700 YAATSASDKTIRIFDFYSGDCLGRVASGHSELVTGVKFTLDCKHLISTGADGCIFVWKLSKRITQQMQKRLGKKFGSGNGATRS 783          
BLAST of mRNA_H-paniculata_contig146.2755.1 vs. uniprot
Match: A0A7S1CEL4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CEL4_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 8.610e-15
Identity = 40/75 (53.33%), Postives = 56/75 (74.67%), Query Frame = 0
Query:    3 AAACSFDKWIRLFDFYSGKCLAKVAGHSELATGVRFTPDGRRLVSTGGDGVMFVWRLSSALQQAMRDRMSELRTS 77
            A  CSFDK IR++DFY G+ L++V  HSE+ TG+ FT D RR++S GGD  + VWRL+  L  AMR+R+SE+++S
Sbjct:  716 AVTCSFDKAIRMYDFYEGRRLSRVTAHSEMVTGLAFTHDCRRMISVGGDACIMVWRLAPELTSAMRERLSEIQSS 790          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig146.2755.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN20_ECTSI1.940e-3188.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CL69_9STRA6.770e-3177.03Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S2CJK0_9STRA2.990e-2567.57Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2AWM8_9STRA4.510e-2361.64Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2S3R8_9STRA2.930e-2264.86Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3CYC9_9EUKA3.160e-1757.89Hypothetical protein (Fragment) n=1 Tax=Palpitomon... [more]
A0A6H5L4C9_9PHAE1.680e-1681.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1UAY3_9STRA2.280e-1549.33Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A0L0HT87_SPIPD6.830e-1554.76Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
A0A7S1CEL4_9STRA8.610e-1553.33Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 19..58
e-value: 2.1E-6
score: 37.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 26..67
score: 12.681
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..104
e-value: 7.3E-14
score: 53.2
NoneNo IPR availablePANTHERPTHR45589FAMILY NOT NAMEDcoord: 2..175
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..67
score: 14.898
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 4..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig146contigH-paniculata_contig146:7405..16633 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig146.2755.1mRNA_H-paniculata_contig146.2755.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig146 7035..16676 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig146.2755.1 ID=prot_H-paniculata_contig146.2755.1|Name=mRNA_H-paniculata_contig146.2755.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1121bp
MYAAACSFDKWIRLFDFYSGKCLAKVAGHSELATGVRFTPDGRRLVSTGG
DGVMFVWRLSSALQQAMRDRMSELRTSGNSGYRAGESSPGVASGTPDVPL
SSDRGRPTTGIPPSAVGGGGDAGTGPQTPAKVAEARAKAKAEAKARLRFQ
RYQLPAWAQTLQPNPVPTTNTTTATATAAGSEGLQTPTHPEKHSQVTPPA
GSDDNEVAITPPAPPTRTEEREVGKLSAMRSVASGADLAIGAGGSFGSQQ
PEPAGENSQGRGNVRGAVLRQKDAEGGYVECSKASDGSTGYKTGSGIEGG
SANGGLSAIGQVGQGMVGHAVGRGFGLRAGRRVAAAGAAVPQGRWGQRVL
QEGPLEILGRRLGHRPFPETLPPSQQRIGAAGDLVQSREEEDGVMLGGSD
EEDENDGYFDDRDLEDIGGPRKQQHQELGNVSPGMVSGPVVASCSAKTGE
DLVSANEEGLRKAVRSGKRYPWDDDDMDMADFVLEVTAGEYNAGTNTDGQ
LKQQEERGQEHGNHSDDDSPLRQSHGQEFSLGLNNRRRRSRSQQSFECIV
GDGDGGGGSLESAGEQEDEGDFCANSPGSENAPGINHDDLAGMRGRRIIE
TEGAVENMRRRLSAMGLLEPTAVAVGGGAGAAVVEGEGRAHDNPGMDRAI
ADNVVATETAVPAENRPGNETSEAPSIGGHSHSIADSAPAGHSGISRTSG
TSVAERKNQKIATNLFSVETETERNTTKKYATPVSACTGLTGLTKSYSPF
KTPTPGETPRQSAIIIPASLAAGEPEGRRRIWSRQPEEVVSQRSAGEVTP
VIGALPRPDEEYETALLRLSAAAEHAAQLYRELTQVAAAAAARDPAQSSL
SVPPVSAEGTSRAVVGMDSFECTGAAAATSAAGVAPILCEGQEVRETAIA
SPAVVTAAAAMAQSRNAWDQEYQAHHVMDDDENADHRADDNSREREEALE
RTEPLLESYRESFASVNDILSVLSAGSASDRPDRTPKYARGTATRTSTAE
PKGSQTSASPTRARRAWAPTPSTSRGSGDGGDLHDKRSGSWSLVDGNGQM
RAALGLSSWEGGSGNTGSASMDESVPAEVAGMLQRYSEMMLRAVQEKIDA
SLADGTLRSSSTRGSEQRLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf