mRNA_H-paniculata_contig146.2755.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig146.2755.1 vs. uniprot
Match: D7FN20_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN20_ECTSI) HSP 1 Score: 170 bits (430), Expect = 9.330e-39 Identity = 81/91 (89.01%), Postives = 85/91 (93.41%), Query Frame = 2 Query: 5 GGELLKVDLDPTGMYAAACSFDKWIRLFDFYSGKCLAKVAGHSELATGVRFTPDGRRLVSTGGDGVMFVWRLSSALQQAMRDRMSELRTSG 277 GGEL KVDLDPTGMYAAACSFDKWIRLFDFYSG+CLAKVAGHSELATGVRFTPDGRRLV+TGGDGVMFVWRLSS L ++MRDRM ELR G Sbjct: 1054 GGELFKVDLDPTGMYAAACSFDKWIRLFDFYSGECLAKVAGHSELATGVRFTPDGRRLVTTGGDGVMFVWRLSSELHESMRDRMCELRPGG 1144
BLAST of mRNA_H-paniculata_contig146.2755.1 vs. uniprot
Match: A0A836CL69_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL69_9STRA) HSP 1 Score: 125 bits (315), Expect = 1.040e-30 Identity = 57/74 (77.03%), Postives = 65/74 (87.84%), Query Frame = 2 Query: 44 MYAAACSFDKWIRLFDFYSGKCLAKVAGHSELATGVRFTPDGRRLVSTGGDGVMFVWRLSSALQQAMRDRMSEL 265 +YAA CSFDKWIRLFDFYSG+CLA+V+GHSEL TGVRFT DGRRL+S GGDG MFVWRLS L +AM DR++EL Sbjct: 1 IYAATCSFDKWIRLFDFYSGRCLARVSGHSELVTGVRFTQDGRRLISIGGDGCMFVWRLSDELHRAMSDRLAEL 74
BLAST of mRNA_H-paniculata_contig146.2755.1 vs. uniprot
Match: A0A7S2CJK0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CJK0_9STRA) HSP 1 Score: 124 bits (310), Expect = 7.990e-29 Identity = 56/85 (65.88%), Postives = 67/85 (78.82%), Query Frame = 2 Query: 11 ELLKVDLDPTGMYAAACSFDKWIRLFDFYSGKCLAKVAGHSELATGVRFTPDGRRLVSTGGDGVMFVWRLSSALQQAMRDRMSEL 265 EL K+ L P GMY A CSFDKWIRLFDFYSG+CLA+VAGH+EL TG+RF+ DG RL+S GGDG +FVW+L L AM +R+ EL Sbjct: 66 ELYKMALCPAGMYTATCSFDKWIRLFDFYSGRCLAQVAGHAELVTGLRFSADGTRLLSVGGDGCIFVWKLGGGLVSAMAERLQEL 150
BLAST of mRNA_H-paniculata_contig146.2755.1 vs. uniprot
Match: A0A7S2AWM8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AWM8_9STRA) HSP 1 Score: 125 bits (313), Expect = 1.250e-28 Identity = 54/87 (62.07%), Postives = 72/87 (82.76%), Query Frame = 2 Query: 2 GGGELLKVDLDPTGMYAAACSFDKWIRLFDFYSGKCLAKVAGHSELATGVRFTPDGRRLVSTGGDGVMFVWRLSSALQQAMRDRMSE 262 GGGEL KV + P GMYAA CSFD+W+RLFD +SG+CLA+V GH+EL TG+RF+ DG+RL+S GGDG +FVW+L+S + QA+ +R+ E Sbjct: 127 GGGELYKVAVCPAGMYAATCSFDRWVRLFDLFSGRCLAQVGGHAELITGIRFSSDGQRLLSVGGDGCIFVWKLASQITQAIGERLEE 213
BLAST of mRNA_H-paniculata_contig146.2755.1 vs. uniprot
Match: A0A7S2S3R8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S3R8_9STRA) HSP 1 Score: 125 bits (314), Expect = 3.000e-25 Identity = 54/88 (61.36%), Postives = 72/88 (81.82%), Query Frame = 2 Query: 2 GGGELLKVDLDPTGMYAAACSFDKWIRLFDFYSGKCLAKVAGHSELATGVRFTPDGRRLVSTGGDGVMFVWRLSSALQQAMRDRMSEL 265 G EL K+ + P GMY A CSFDKWIRLFDFYSG C+A+VAGH+EL TG++FTPDG+RL+S GGDG +FVW+L+SA+ + +++R E+ Sbjct: 286 GSSELYKLAICPGGMYTATCSFDKWIRLFDFYSGACIAQVAGHAELVTGLKFTPDGKRLISIGGDGCIFVWKLNSAIARGIQEREKEI 373
BLAST of mRNA_H-paniculata_contig146.2755.1 vs. uniprot
Match: A0A6H5L4C9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4C9_9PHAE) HSP 1 Score: 121 bits (303), Expect = 7.830e-24 Identity = 60/72 (83.33%), Postives = 62/72 (86.11%), Query Frame = 2 Query: 5 GGELLKVDLDPTGMYAAACSFDK--------WIRLFDFYSGKCLAKVAGHSELATGVRFTPDGRRLVSTGGD 196 GGEL KVDLDPTGMYAAACSFDK WIRLFDFYSG+CLAKVAGHSELATGVRFTPDGRRLV+TG D Sbjct: 439 GGELFKVDLDPTGMYAAACSFDKVCVRCSIVWIRLFDFYSGECLAKVAGHSELATGVRFTPDGRRLVTTGDD 510
BLAST of mRNA_H-paniculata_contig146.2755.1 vs. uniprot
Match: A0A7S3CYC9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3CYC9_9EUKA) HSP 1 Score: 107 bits (268), Expect = 9.570e-22 Identity = 50/91 (54.95%), Postives = 67/91 (73.63%), Query Frame = 2 Query: 8 GELLKVDLDPTGMYAAACSFDKWIRLFDFYSGKCLAKVAGHSELATGVRFTPDGRRLVSTGGDGVMFVWRLSSALQQAMRDRMSELRTSGN 280 GE +K+ +DP G+ A DK++RL DF SG+CL +V GHSEL TG++FTPD RRL+S GDG MFVW+L S L +AM DR++EL +G+ Sbjct: 101 GEPIKIQMDPAGVTFATSGSDKFVRLHDFLSGECLVRVGGHSELITGLKFTPDCRRLISVAGDGCMFVWKLRSDLTRAMLDRLAELFPAGH 191
BLAST of mRNA_H-paniculata_contig146.2755.1 vs. uniprot
Match: UPI0015E1E888 (mitogen-activated protein kinase-binding protein 1-like n=1 Tax=Morone saxatilis TaxID=34816 RepID=UPI0015E1E888) HSP 1 Score: 99.8 bits (247), Expect = 2.390e-20 Identity = 46/86 (53.49%), Postives = 62/86 (72.09%), Query Frame = 2 Query: 8 GELLKVDLDPTGMYAAACSFDKWIRLFDFYSGKCLAKVAGHSELATGVRFTPDGRRLVSTGGDGVMFVWRLSSALQQAMRDRMSEL 265 G L+KV +DP+G+Y AA DK I +FDFYSG+C+A + GHSE+ TGVRF+ D R L++ GD +FVWRLS L MR R+++L Sbjct: 34 GTLIKVQIDPSGLYIAASCSDKNISIFDFYSGECVATMFGHSEIVTGVRFSSDCRHLITVSGDSCIFVWRLSPELTIRMRQRLADL 119
BLAST of mRNA_H-paniculata_contig146.2755.1 vs. uniprot
Match: A0A7S1UAY3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UAY3_9STRA) HSP 1 Score: 108 bits (270), Expect = 3.640e-20 Identity = 44/87 (50.57%), Postives = 65/87 (74.71%), Query Frame = 2 Query: 8 GELLKVDLDPTGMYAAACSFDKWIRLFDFYSGKCLAKVAGHSELATGVRFTPDGRRLVSTGGDGVMFVWRLSSALQQAMRDRMSELR 268 GE L+V +DP+G+Y A CS+D+W+R+ DFYSG+ +A+ AGH E+ T FTPDG+ LV+ G DGV+F W+L ++ A+ DR+ EL+ Sbjct: 550 GETLRVSVDPSGLYVATCSYDRWVRITDFYSGRVVARAAGHGEVVTAAAFTPDGQNLVTAGADGVIFSWKLPPHVRTAVSDRLQELK 636
BLAST of mRNA_H-paniculata_contig146.2755.1 vs. uniprot
Match: A0A7S1CEL4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CEL4_9STRA) HSP 1 Score: 102 bits (254), Expect = 2.770e-18 Identity = 46/88 (52.27%), Postives = 65/88 (73.86%), Query Frame = 2 Query: 11 ELLKVDLDPTGMYAAACSFDKWIRLFDFYSGKCLAKVAGHSELATGVRFTPDGRRLVSTGGDGVMFVWRLSSALQQAMRDRMSELRTS 274 EL +V +DP G+ A CSFDK IR++DFY G+ L++V HSE+ TG+ FT D RR++S GGD + VWRL+ L AMR+R+SE+++S Sbjct: 703 ELNRVVMDPAGILAVTCSFDKAIRMYDFYEGRRLSRVTAHSEMVTGLAFTHDCRRMISVGGDACIMVWRLAPELTSAMRERLSEIQSS 790 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig146.2755.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig146.2755.1 >prot_H-paniculata_contig146.2755.1 ID=prot_H-paniculata_contig146.2755.1|Name=mRNA_H-paniculata_contig146.2755.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1121bp MYAAACSFDKWIRLFDFYSGKCLAKVAGHSELATGVRFTPDGRRLVSTGGback to top mRNA from alignment at H-paniculata_contig146:7035..16676- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig146.2755.1 ID=mRNA_H-paniculata_contig146.2755.1|Name=mRNA_H-paniculata_contig146.2755.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9642bp|location=Sequence derived from alignment at H-paniculata_contig146:7035..16676- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig146:7035..16676- >mRNA_H-paniculata_contig146.2755.1 ID=mRNA_H-paniculata_contig146.2755.1|Name=mRNA_H-paniculata_contig146.2755.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=6726bp|location=Sequence derived from alignment at H-paniculata_contig146:7035..16676- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |