mRNA_H-paniculata_contig14590.2752.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig14590.2752.1
Unique NamemRNA_H-paniculata_contig14590.2752.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig14590.2752.1 vs. uniprot
Match: A0A6H5L3Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Q8_9PHAE)

HSP 1 Score: 577 bits (1486), Expect = 6.730e-205
Identity = 304/353 (86.12%), Postives = 321/353 (90.93%), Query Frame = 1
Query:    1 ILYSEMSIGVPKEVMPREKRVAQTPDTVGKLTKLGITVNVEAGAGEPSKCSDDRYVAAGAKIVNRDAVWKSDLVIKVNPPTEEEATMLGSRAVMSLFWPAQNTALLEQMAKQGATVLAMDQLPRTLSRGQSFDVLSSQANITGYRAVLEAAHHFDRFFAGQTTAAGRIPPAKVLVLGGGVAGLAAVQAAKNMGAIVKAFDVRPAVKEQIESLGGEFLEVDVQEDGSGAGGYAKEMSKEWFAAAERMLAAEVKDMDVVIGTALIPGRPAPRLVTEAMVHSMKAGSVTVDLAAATGGNIGTTRADEARAIVYKTDNGATCIGYTDMSSRLANTASTLFSNNAVKLFCSAGPFSTG 1059
            I YSEMS+GVPKE+ P EKRVAQTPDTV KL KLGITVNVEAGAGE S+CSD  Y AAGA IV +D VW+SDLV+KVNPPT EEA +L SRA+MSLFWPAQN  LLEQMAKQGATVLAMDQLPRTLSRGQ+FDVLSSQANI GYRAVLEAAHHFDRFFAGQTTAAGRIPPAKVLVLGGGVAGLAAVQ AKNMGA+VKAFDVRPAVKEQIESLGGEFLEVD+QEDGSGAGGYAKEMSKEWF AAERMLAAE+K +DVVIGTALIPG+PAPRL+TE MVHSMK GSVTVDLAAATGGNI TTRADE    VYKT NG TCIGYT+M+SRLANTASTLFSNN VKLF SAGPFSTG
Sbjct:   61 IPYSEMSVGVPKEITPLEKRVAQTPDTVAKLVKLGITVNVEAGAGEASQCSDKGYEAAGANIVGKDKVWQSDLVMKVNPPTTEEAALLESRAIMSLFWPAQNKELLEQMAKQGATVLAMDQLPRTLSRGQAFDVLSSQANIAGYRAVLEAAHHFDRFFAGQTTAAGRIPPAKVLVLGGGVAGLAAVQTAKNMGAVVKAFDVRPAVKEQIESLGGEFLEVDLQEDGSGAGGYAKEMSKEWFEAAERMLAAEMKGIDVVIGTALIPGKPAPRLITEPMVHSMKVGSVTVDLAAATGGNIATTRADE----VYKTPNGVTCIGYTNMTSRLANTASTLFSNNVVKLFSSAGPFSTG 409          
BLAST of mRNA_H-paniculata_contig14590.2752.1 vs. uniprot
Match: D7FQ93_ECTSI (Proton-translocating NAD(P)(+) transhydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ93_ECTSI)

HSP 1 Score: 553 bits (1424), Expect = 2.430e-185
Identity = 306/403 (75.93%), Postives = 318/403 (78.91%), Query Frame = 1
Query:    1 ILYSEMSIGVPKEVMPREKRVAQTPDTVGKLTKLGITVNVEAGAGEPSKCSDDRYVAAGAKIVNRDAVWKSDLVIKVNPPTEEEATMLGSRAVMSLFWPAQNTALLEQMAKQGATVLAMDQLPRTLSRGQSFDVLSSQANITGYRAVLEAAHHFDRFFAGQTTAAGRIPPAKVLVLGGGVAGLAAVQAAKNMGAIVKAFDVRPAVKEQIESLGGEFLEVDVQEDGSGAGGYAKEMSKEWFAAAERMLAAEVKDMDVVIGTALIPGRPAPRLVTEA--------------------------------------------------MVHSMKAGSVTVDLAAATGGNIGTTRADEARAIVYKTDNGATCIGYTDMSSRLANTASTLFSNNAVKLFCSAGPFSTG 1059
            I YSEMS+GVPKE+ P EKRVAQTPDTV KL KLGITVNVEAGAGE SKCSD  Y AAGA IV +D VWKSDLV+KVNPPT EEA +L SRA+MSLFWPAQN  LLEQMAKQGATVLAMDQLPRTLSRGQSFDVLSSQANI GYRAVLEAAHHFDRFFAGQTTAAGRIPPAKVLVLGGGVAGLAAVQAAKNMGA+VKAFDVRPAVKEQIESLGGEFLEVD+QEDGSGAGGYAKEMSKEWF AAERMLAAE+K +DVVIGTALIPGRPAPRL+TE                                                   MV SMK GSVTVDLAAATGGNI TTRADE    VYKT NG TCIGYTDM+SRLANTAS LFSNN VKLF SAGPF  G
Sbjct:   87 IPYSEMSVGVPKEITPLEKRVAQTPDTVAKLVKLGITVNVEAGAGEASKCSDKGYEAAGANIVGKDKVWKSDLVMKVNPPTTEEAALLESRAIMSLFWPAQNKELLEQMAKQGATVLAMDQLPRTLSRGQSFDVLSSQANIAGYRAVLEAAHHFDRFFAGQTTAAGRIPPAKVLVLGGGVAGLAAVQAAKNMGAVVKAFDVRPAVKEQIESLGGEFLEVDLQEDGSGAGGYAKEMSKEWFQAAERMLAAEMKGIDVVIGTALIPGRPAPRLITEVLVLGGGVAGLAAVQAAKNMGAVVKAFDVRPAVKEQIESLGGEFLEVDLQPMVDSMKVGSVTVDLAAATGGNIATTRADE----VYKTPNGVTCIGYTDMTSRLANTASALFSNNVVKLFSSAGPFQHG 485          
BLAST of mRNA_H-paniculata_contig14590.2752.1 vs. uniprot
Match: A0A835ZE55_9STRA (Proton-translocating NAD(P)(+) transhydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE55_9STRA)

HSP 1 Score: 475 bits (1223), Expect = 3.530e-156
Identity = 252/350 (72.00%), Postives = 290/350 (82.86%), Query Frame = 1
Query:    7 YSEMSIGVPKEVMPREKRVAQTPDTVGKLTKLGITVNVEAGAGEPSKCSDDRYVAAGAKIVNRDAVWKSDLVIKVNPPTEEEATMLGSRAVMSLFWPAQNTALLEQMAKQGATVLAMDQLPRTLSRGQSFDVLSSQANITGYRAVLEAAHHFDRFFAGQTTAAGRIPPAKVLVLGGGVAGLAAVQAAKNMGAIVKAFDVRPAVKEQIESLGGEFLEVDVQEDGSGAGGYAKEMSKEWFAAAERMLAAEVKDMDVVIGTALIPGRPAPRLVTEAMVHSMKAGSVTVDLAAATGGNIGTTRADEARAIVYKTDNGATCIGYTDMSSRLANTASTLFSNNAVKLFCSAGPFST 1056
            Y ++++GVPKE M  EKRV QTP TV KLT +G+ V VEAGAG     +D++Y AAGA IV+   VWKSDLVIKV  PT+EEA  L +RA++SLFWPAQN  LL+ +  QGATVLA+D LPRTLSRGQ+FDVLSSQANITGYRAVLEAAH FDRFFAGQTTAAGR+PPA+VLVLGGGVAGLAA+QAA+ MGA+VKAFDVR AVKEQ++SLGGEFLEV   E+GSGAGGYAKEMSKEWF AA ++LA EVKDMD++I TALIPG+PAPRL+T  MV +MK GSVTVDLAA +GGNIGTTRADEA    Y+T NG  CIGYTDM+SRLA TASTLF+NN  K F S GP +T
Sbjct:   62 YGDITVGVPKETMRLEKRVGQTPQTVKKLTAVGVKVRVEAGAGAACDFADEQYRAAGAAIVSAAEVWKSDLVIKVRAPTKEEAAKLENRALLSLFWPAQNKELLDLLKAQGATVLALDCLPRTLSRGQAFDVLSSQANITGYRAVLEAAHAFDRFFAGQTTAAGRVPPARVLVLGGGVAGLAAIQAARGMGAVVKAFDVRAAVKEQVQSLGGEFLEVSTGEEGSGAGGYAKEMSKEWFDAAAKVLAREVKDMDIIIATALIPGKPAPRLITAEMVATMKPGSVTVDLAAESGGNIGTTRADEA----YRTANGVFCIGYTDMASRLAATASTLFANNTSKFFLSMGPITT 407          
BLAST of mRNA_H-paniculata_contig14590.2752.1 vs. uniprot
Match: A0A6V2UXD4_HETAK (Proton-translocating NAD(P)(+) transhydrogenase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2UXD4_HETAK)

HSP 1 Score: 446 bits (1148), Expect = 3.530e-145
Identity = 236/352 (67.05%), Postives = 281/352 (79.83%), Query Frame = 1
Query:    1 ILYSEMSIGVPKEVMPREKRVAQTPDTVGKLTKLGITVNVEAGAGEPSKCSDDRYVAAGAKIVNRDAVWKSDLVIKVNPPTEEEATMLGSRAVMSLFWPAQNTALLEQMAKQGATVLAMDQLPRTLSRGQSFDVLSSQANITGYRAVLEAAHHFDRFFAGQTTAAGRIPPAKVLVLGGGVAGLAAVQAAKNMGAIVKAFDVRPAVKEQIESLGGEFLEVDVQEDGSGAGGYAKEMSKEWFAAAERMLAAEVKDMDVVIGTALIPGRPAPRLVTEAMVHSMKAGSVTVDLAAATGGNIGTTRADEARAIVYKTDNGATCIGYTDMSSRLANTASTLFSNNAVKLFCSAGPFST 1056
            I Y +MSIG+PKE+  RE RVA  PDTV K  K G+TVNV+ GAGE S+ SD++Y AAGA +V++ AVWKSDLV+KV PPT EEA +L  RA +S  +PA NT L+ Q+ KQGAT L +D L RTLSR Q++D LSSQANI GYRAV+EAA  FDRFFAGQ TAAGR+PPAKVLV+GGGVAGLAAVQAAKNMGAIV+AFDVRPA KEQIES+GGEFL V+  EDGS AGGYAKEMSKEWF AA RML  + +++D+++GTALIPG+ AP+L+++ MV  MKAGSVTVDLAA +GGNI  TR DE    VY T NG TC+GY++M+S LANTAS L +NN  KL  +AGPFST
Sbjct:   55 IPYEKMSIGIPKELDHREFRVAGIPDTVAKFVKAGMTVNVQKGAGEKSQFSDEKYAAAGANLVDQKAVWKSDLVLKVKPPTPEEAALLEDRASLSFLYPAVNTELVAQLQKQGATALGIDSLHRTLSRAQAYDALSSQANIAGYRAVIEAASRFDRFFAGQMTAAGRVPPAKVLVIGGGVAGLAAVQAAKNMGAIVRAFDVRPAAKEQIESMGGEFLMVEHTEDGSAAGGYAKEMSKEWFDAAARMLKKQCQEVDIIVGTALIPGKKAPQLISQDMVDVMKAGSVTVDLAAESGGNIAATRCDE----VYTTPNGVTCVGYSNMASHLANTASFLLANNFAKLVLAAGPFST 402          
BLAST of mRNA_H-paniculata_contig14590.2752.1 vs. uniprot
Match: A0A6V2B5X5_9STRA (Proton-translocating NAD(P)(+) transhydrogenase n=6 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2B5X5_9STRA)

HSP 1 Score: 431 bits (1107), Expect = 2.850e-139
Identity = 225/350 (64.29%), Postives = 274/350 (78.29%), Query Frame = 1
Query:    7 YSEMSIGVPKEVMPREKRVAQTPDTVGKLTKLGITVNVEAGAGEPSKCSDDRYVAAGAKIVNRDAVWKSDLVIKVNPPTEEEATMLGSRAVMSLFWPAQNTALLEQMAKQGATVLAMDQLPRTLSRGQSFDVLSSQANITGYRAVLEAAHHFDRFFAGQTTAAGRIPPAKVLVLGGGVAGLAAVQAAKNMGAIVKAFDVRPAVKEQIESLGGEFLEVDVQEDGSGAGGYAKEMSKEWFAAAERMLAAEVKDMDVVIGTALIPGRPAPRLVTEAMVHSMKAGSVTVDLAAATGGNIGTTRADEARAIVYKTDNGATCIGYTDMSSRLANTASTLFSNNAVKLFCSAGPFST 1056
            YS++ IGVPKE  P EKRV+ TP+TV KLT  G +V +E+GAG  S  SD  Y AAGAKIV  D VWKSDLV+K+ PPT EEAT L  R+++S  WP QN  L++Q+  Q ATV AMD +PRTLSRGQ++D LSSQANI+GYRAVLEA++ F RFFAGQ TAAG++PPAKVLV+G GVAGLAA+Q AKNMGAIV+AFDVRP  KEQ+E++GG+FLEVD QEDGSGAGGYAKEMSKEW AAA  ML+ + +++D+VI TALIPGRPAP+++T+ M+  MK+GSVTVDLAA  GGNI TT  D+     + TDNG  C+GYTD+ SRL  T+STL+SNN  K   S GP +T
Sbjct:   49 YSKIKIGVPKETFPLEKRVSATPETVSKLTAPGFSVLIESGAGAASHFSDKDYEAAGAKIVAADDVWKSDLVMKLRPPTPEEATKLEDRSLISFVWPGQNKELVQQLQDQNATVFAMDCIPRTLSRGQTYDALSSQANISGYRAVLEASNEFGRFFAGQMTAAGKVPPAKVLVVGTGVAGLAAIQTAKNMGAIVRAFDVRPVTKEQVEAMGGQFLEVDYQEDGSGAGGYAKEMSKEWHAAAAAMLSKQCEEVDIVITTALIPGRPAPKMITKDMIAKMKSGSVTVDLAAENGGNIETTVKDQK----FITDNGVICLGYTDLPSRLPTTSSTLYSNNISKFLLSTGPMTT 394          
BLAST of mRNA_H-paniculata_contig14590.2752.1 vs. uniprot
Match: A0A7S2LQP6_9STRA (Proton-translocating NAD(P)(+) transhydrogenase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LQP6_9STRA)

HSP 1 Score: 417 bits (1071), Expect = 6.090e-134
Identity = 223/353 (63.17%), Postives = 276/353 (78.19%), Query Frame = 1
Query:    1 ILYSEMSIGVPKEVMPREKRVAQTPDTVGKLTKLGITVNVEAGAGEPSKCSDDRYVAAGAKIVNRDAVWK-SDLVIKVNPPTEEEATMLGSRAVMSLFWPAQNTALLEQMAKQGATVLAMDQLPRTLSRGQSFDVLSSQANITGYRAVLEAAHHFDRFFAGQTTAAGRIPPAKVLVLGGGVAGLAAVQAAKNMGAIVKAFDVRPAVKEQIESLGGEFLEVDVQEDGSGAGGYAKEMSKEWFAAAERMLAAEVKDMDVVIGTALIPGRPAPRLVTEAMVHSMKAGSVTVDLAAATGGNIGTTRADEARAIVYKTDNGATCIGYTDMSSRLANTASTLFSNNAVKLFCSAGPFST 1056
            I YS++++GVPKE  P EKRVA TP++V KL K G  V +E GAG  S  SD  Y +AGAKIV  + VWK SD+V+K+ PPT EEA+ L  R ++S  +PAQN  L++Q+  Q AT  AMD +PRTLSRGQ++D LSSQANITGYRAV+EA++ F RFFAGQ TAAG++PPAKVLV+G GVAGLAA+Q AKNMGAIV+AFDVRP  KEQ+E++GG+FLEVD +EDGSGAGGYAKEMSKEW AAA +ML+ + +++D+VI TA IPGR AP ++T+ MV  +KAGSVTVDLAA TGGNIGTT  DE R I   TDNG TC+GYTD++SRL  T+S+L+SNN  K   S GP +T
Sbjct:   47 IPYSKLTLGVPKERFPLEKRVAATPESVSKLVKPGFNVLIEKGAGSSSHFSDAEYASAGAKIVEAEEVWKNSDIVMKLRPPTTEEASKLEDRTLISFIYPAQNKELVQQLQDQKATAFAMDCIPRTLSRGQTYDALSSQANITGYRAVIEASNEFGRFFAGQMTAAGKVPPAKVLVVGTGVAGLAAIQTAKNMGAIVRAFDVRPVTKEQVEAMGGQFLEVDYKEDGSGAGGYAKEMSKEWHAAAAQMLSKQCEEVDIVITTAAIPGRKAPLMITKEMVAKLKAGSVTVDLAAETGGNIGTTVKDE-RII---TDNGVTCLGYTDLASRLPTTSSSLYSNNISKFLLSMGPQTT 395          
BLAST of mRNA_H-paniculata_contig14590.2752.1 vs. uniprot
Match: B8C9R3_THAPS (Proton-translocating NAD(P)(+) transhydrogenase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9R3_THAPS)

HSP 1 Score: 417 bits (1071), Expect = 7.210e-134
Identity = 220/353 (62.32%), Postives = 275/353 (77.90%), Query Frame = 1
Query:    1 ILYSEMSIGVPKEVMPREKRVAQTPDTVGKLTKLGITVNVEAGAGEPSKCSDDRYVAAGAKIVNRDAVWK-SDLVIKVNPPTEEEATMLGSRAVMSLFWPAQNTALLEQMAKQGATVLAMDQLPRTLSRGQSFDVLSSQANITGYRAVLEAAHHFDRFFAGQTTAAGRIPPAKVLVLGGGVAGLAAVQAAKNMGAIVKAFDVRPAVKEQIESLGGEFLEVDVQEDGSGAGGYAKEMSKEWFAAAERMLAAEVKDMDVVIGTALIPGRPAPRLVTEAMVHSMKAGSVTVDLAAATGGNIGTTRADEARAIVYKTDNGATCIGYTDMSSRLANTASTLFSNNAVKLFCSAGPFST 1056
            I Y+++++GVPKE  P EKRVA TP++V KL K G  V +E GAG  S  SD  Y +AGAKIV  D VWK SD+V+K+ PPT+EE T L +R ++S  +PAQN  LL+Q+  Q +T  +MD +PRTLSRGQ++D LSSQANITGYRAV+EA++ F RFFAGQ TAAG++PPAKVLV+G GVAGLAA+Q AKNMGAIV+AFDVRP  KEQ+E++GG+FLEVD QEDGSGAGGYAKEMSKEW AAA +ML  + +++D+VI TA IPGR AP ++T+AMV  MK+GSVTVDLAA +GGNI TT  DE     + TDNG TC+GYTD++SRL  T+S+L+SNN  K   S GP +T
Sbjct:   55 IPYNKLTVGVPKERFPLEKRVAATPESVSKLVKPGFNVLIEKGAGSSSYFSDADYESAGAKIVEADQVWKESDIVMKLRPPTKEELTQLDNRTIISFLYPAQNPELLQQLQDQKSTAFSMDCIPRTLSRGQTYDALSSQANITGYRAVVEASNEFGRFFAGQMTAAGKVPPAKVLVVGTGVAGLAAIQTAKNMGAIVRAFDVRPVTKEQVEAMGGQFLEVDYQEDGSGAGGYAKEMSKEWHAAAAKMLGKQCEEVDIVITTAAIPGRKAPLMITKAMVDKMKSGSVTVDLAAESGGNIETTVKDEK----FITDNGVTCLGYTDLASRLPTTSSSLYSNNISKFLLSMGPQTT 403          
BLAST of mRNA_H-paniculata_contig14590.2752.1 vs. uniprot
Match: A0A7S4EXX0_CHRCT (Proton-translocating NAD(P)(+) transhydrogenase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EXX0_CHRCT)

HSP 1 Score: 415 bits (1066), Expect = 2.180e-133
Identity = 224/350 (64.00%), Postives = 274/350 (78.29%), Query Frame = 1
Query:    7 YSEMSIGVPKEVMPREKRVAQTPDTVGKLTKLGITVNVEAGAGEPSKCSDDRYVAAGAKIVNRDAVWKSDLVIKVNPPTEEEATMLGSRAVMSLFWPAQNTALLEQMAKQGATVLAMDQLPRTLSRGQSFDVLSSQANITGYRAVLEAAHHFDRFFAGQTTAAGRIPPAKVLVLGGGVAGLAAVQAAKNMGAIVKAFDVRPAVKEQIESLGGEFLEVDVQEDGSGAGGYAKEMSKEWFAAAERMLAAEVKDMDVVIGTALIPGRPAPRLVTEAMVHSMKAGSVTVDLAAATGGNIGTTRADEARAIVYKTDNGATCIGYTDMSSRLANTASTLFSNNAVKLFCSAGPFST 1056
            YSE++IGVPKE +P E+RVAQTP++V KL K G  V V  GAGE +  +D  YVA+GA IV+++  + + LV KV  PT EEA M+G R ++S  +PAQN  LLEQ+  Q ATV AMD +PRTLSRGQ+FD LSSQANI GYRAV+EA++ F RFFAGQ TAAG++PPAKVLVLGGGVAGLAAVQ AKNMGA+V+ FDVR AVKEQ +SLG EFLEVD +E G G GGYAKEMSKEW AAA  ML  +++++D+VI TALIPG+PAP+LV E MV ++K GSVTVDLAA+ GGN+ TT  D  +AIV  T NG TCIGYTD++SRLA T+STL++NN +K   SAGP +T
Sbjct:   31 YSEITIGVPKETVPLERRVAQTPESVAKLVKEGFVVRVAKGAGERADFNDSAYVASGASIVSQEEAFGASLVTKVMGPTPEEAKMIGDRMLLSFIFPAQNKELLEQLQAQKATVFAMDCIPRTLSRGQAFDALSSQANIAGYRAVIEASNVFGRFFAGQMTAAGKVPPAKVLVLGGGVAGLAAVQTAKNMGAVVRLFDVRAAVKEQAQSLGAEFLEVDHEESGEGGGGYAKEMSKEWHAAANAMLLKQMEEVDIVITTALIPGKPAPKLVDETMVKALKPGSVTVDLAASAGGNVATTVKD--KAIV--TPNGVTCIGYTDLNSRLAQTSSTLYANNQMKWILSAGPTTT 376          
BLAST of mRNA_H-paniculata_contig14590.2752.1 vs. uniprot
Match: A0A7S0LNL4_9EUKA (Proton-translocating NAD(P)(+) transhydrogenase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LNL4_9EUKA)

HSP 1 Score: 413 bits (1061), Expect = 1.330e-132
Identity = 220/352 (62.50%), Postives = 270/352 (76.70%), Query Frame = 1
Query:    1 ILYSEMSIGVPKEVMPREKRVAQTPDTVGKLTKLGITVNVEAGAGEPSKCSDDRYVAAGAKIVNRDAVWKSDLVIKVNPPTEEEATMLGSRAVMSLFWPAQNTALLEQMAKQGATVLAMDQLPRTLSRGQSFDVLSSQANITGYRAVLEAAHHFDRFFAGQTTAAGRIPPAKVLVLGGGVAGLAAVQAAKNMGAIVKAFDVRPAVKEQIESLGGEFLEVDVQEDGSGAGGYAKEMSKEWFAAAERMLAAEVKDMDVVIGTALIPGRPAPRLVTEAMVHSMKAGSVTVDLAAATGGNIGTTRADEARAIVYKTDNGATCIGYTDMSSRLANTASTLFSNNAVKLFCSAGPFST 1056
            I YS++SIGVPKE+  RE+RV+QTP++V KL K G +V VE GAG  +   D  Y  AGAK+V+R+  +K+ L+ KV  PT EE  ++ +R ++S  +PAQN  LLEQ+  Q AT  AMD +PRTLSRGQ+FD LSSQANI+GYRAV+EA+H F RFFAGQ TAAG++PPAKVLVLGGGVAGLAAVQ AKNMGA+V+ FDVR AVKEQ +SLG EFLEVD  E G G GGYAKEMSKEW AAA  ML  ++ ++D+VI TALIPG+PAP+LV   MV ++K GSVTVDLAAA GGN+ TT  DE    V  TDNG TCIGYTD++SRLA+T+S L++NN +K   +AGP ST
Sbjct:   34 IPYSQLSIGVPKELADRERRVSQTPESVSKLVKEGFSVLVERGAGASADFGDSMYEDAGAKLVSREEAYKASLITKVTVPTSEEVKLIENRMLLSFLFPAQNAPLLEQLKAQKATAFAMDCIPRTLSRGQAFDALSSQANISGYRAVVEASHVFGRFFAGQMTAAGKVPPAKVLVLGGGVAGLAAVQTAKNMGAVVRLFDVRAAVKEQAQSLGAEFLEVDFHESGEGGGGYAKEMSKEWHAAANAMLLKQMSEVDIVITTALIPGKPAPKLVDAEMVAALKPGSVTVDLAAANGGNVATTVKDE----VIVTDNGVTCIGYTDLNSRLASTSSALYANNQMKWILAAGPTST 381          
BLAST of mRNA_H-paniculata_contig14590.2752.1 vs. uniprot
Match: A0A7S3STK5_EMIHU (Proton-translocating NAD(P)(+) transhydrogenase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3STK5_EMIHU)

HSP 1 Score: 413 bits (1061), Expect = 1.350e-132
Identity = 222/350 (63.43%), Postives = 268/350 (76.57%), Query Frame = 1
Query:    7 YSEMSIGVPKEVMPREKRVAQTPDTVGKLTKLGITVNVEAGAGEPSKCSDDRYVAAGAKIVNRDAVWKSDLVIKVNPPTEEEATMLGSRAVMSLFWPAQNTALLEQMAKQGATVLAMDQLPRTLSRGQSFDVLSSQANITGYRAVLEAAHHFDRFFAGQTTAAGRIPPAKVLVLGGGVAGLAAVQAAKNMGAIVKAFDVRPAVKEQIESLGGEFLEVDVQEDGSGAGGYAKEMSKEWFAAAERMLAAEVKDMDVVIGTALIPGRPAPRLVTEAMVHSMKAGSVTVDLAAATGGNIGTTRADEARAIVYKTDNGATCIGYTDMSSRLANTASTLFSNNAVKLFCSAGPFST 1056
            YSE+S+GVPKE    EKRV QTP++V KL K GITV VEAGAG  +  SD  Y  AGA +V+RD  W + LV KV PPTEEEA ++G R ++S  +PAQN AL++Q+  Q ATV AMD +PRTLSRGQ+FD LSSQANI GYRAV+EA+  F RFFAGQ TAAG++PPAKV+VLGGGVAGLAAVQ AKNMGAIVK FDVR AV+EQ +S+G EFL+VD +E G G GGYAKEMS EW AAA  ML  + +D+D+VI TALIPG+ AP +VTE MV  MKAGSVTVDLAA+ GGN+ TT  DE    +  T NG  CIGYTD++SRLA+T+S+L++NN  K   +AGP +T
Sbjct:   34 YSELSVGVPKESASMEKRVGQTPESVAKLVKEGITVKVEAGAGAAADFSDAAYEKAGASVVSRDEAWGASLVTKVMPPTEEEAKLVGDRMLLSFVFPAQNDALVKQLQAQKATVFAMDCIPRTLSRGQAFDALSSQANIAGYRAVIEASGVFGRFFAGQMTAAGKVPPAKVMVLGGGVAGLAAVQTAKNMGAIVKLFDVRAAVEEQAKSMGAEFLKVDFEESGEGGGGYAKEMSAEWHAAAREMLTKQCEDVDIVITTALIPGKKAPVMVTEEMVGKMKAGSVTVDLAASAGGNVETTVPDE----MITTPNGVKCIGYTDLNSRLASTSSSLYANNQQKWIAAAGPTTT 379          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14590.2752.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L3Q8_9PHAE6.730e-20586.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQ93_ECTSI2.430e-18575.93Proton-translocating NAD(P)(+) transhydrogenase n=... [more]
A0A835ZE55_9STRA3.530e-15672.00Proton-translocating NAD(P)(+) transhydrogenase n=... [more]
A0A6V2UXD4_HETAK3.530e-14567.05Proton-translocating NAD(P)(+) transhydrogenase n=... [more]
A0A6V2B5X5_9STRA2.850e-13964.29Proton-translocating NAD(P)(+) transhydrogenase n=... [more]
A0A7S2LQP6_9STRA6.090e-13463.17Proton-translocating NAD(P)(+) transhydrogenase n=... [more]
B8C9R3_THAPS7.210e-13462.32Proton-translocating NAD(P)(+) transhydrogenase n=... [more]
A0A7S4EXX0_CHRCT2.180e-13364.00Proton-translocating NAD(P)(+) transhydrogenase n=... [more]
A0A7S0LNL4_9EUKA1.330e-13262.50Proton-translocating NAD(P)(+) transhydrogenase n=... [more]
A0A7S3STK5_EMIHU1.350e-13263.43Proton-translocating NAD(P)(+) transhydrogenase n=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14590contigH-paniculata_contig14590:648..5749 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score550.8
Seed ortholog evalue4.5e-154
Seed eggNOG ortholog2880.D7FQ93
KEGG rclassRC00001
KEGG koko:K00323
KEGG ReactionR00112
KEGG Pathwayko00760,ko01100,map00760,map01100
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Transhydrogenase
EggNOG OGs2QQ0A@2759,COG1282@1
Ec32 ortholog descriptionNicotinamide nucleotide transhydrogenase
Ec32 orthologEc-01_007000.2
EC1.6.1.2
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons7
Model size1062
Cds size1047
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14590.2752.1prot_H-paniculata_contig14590.2752.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig14590 663..5749 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929160.8631797-UTR-H-paniculata_contig14590:647..6621622929160.8631797-UTR-H-paniculata_contig14590:647..662Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14590 648..662 +
1691480754.6138759-UTR-H-paniculata_contig14590:647..6621691480754.6138759-UTR-H-paniculata_contig14590:647..662Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14590 648..662 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929160.8788097-CDS-H-paniculata_contig14590:662..8481622929160.8788097-CDS-H-paniculata_contig14590:662..848Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14590 663..848 +
1691480754.6358023-CDS-H-paniculata_contig14590:662..8481691480754.6358023-CDS-H-paniculata_contig14590:662..848Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14590 663..848 +
1622929160.8919227-CDS-H-paniculata_contig14590:1345..15341622929160.8919227-CDS-H-paniculata_contig14590:1345..1534Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14590 1346..1534 +
1691480754.6465397-CDS-H-paniculata_contig14590:1345..15341691480754.6465397-CDS-H-paniculata_contig14590:1345..1534Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14590 1346..1534 +
1622929160.9090388-CDS-H-paniculata_contig14590:2005..21311622929160.9090388-CDS-H-paniculata_contig14590:2005..2131Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14590 2006..2131 +
1691480754.6571972-CDS-H-paniculata_contig14590:2005..21311691480754.6571972-CDS-H-paniculata_contig14590:2005..2131Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14590 2006..2131 +
1622929160.9232335-CDS-H-paniculata_contig14590:3089..32391622929160.9232335-CDS-H-paniculata_contig14590:3089..3239Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14590 3090..3239 +
1691480754.6674137-CDS-H-paniculata_contig14590:3089..32391691480754.6674137-CDS-H-paniculata_contig14590:3089..3239Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14590 3090..3239 +
1622929160.9410367-CDS-H-paniculata_contig14590:4069..42251622929160.9410367-CDS-H-paniculata_contig14590:4069..4225Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14590 4070..4225 +
1691480754.6771932-CDS-H-paniculata_contig14590:4069..42251691480754.6771932-CDS-H-paniculata_contig14590:4069..4225Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14590 4070..4225 +
1622929160.957815-CDS-H-paniculata_contig14590:4762..48641622929160.957815-CDS-H-paniculata_contig14590:4762..4864Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14590 4763..4864 +
1691480754.6872046-CDS-H-paniculata_contig14590:4762..48641691480754.6872046-CDS-H-paniculata_contig14590:4762..4864Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14590 4763..4864 +
1622929160.9734066-CDS-H-paniculata_contig14590:5611..57491622929160.9734066-CDS-H-paniculata_contig14590:5611..5749Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14590 5612..5749 +
1691480754.699887-CDS-H-paniculata_contig14590:5611..57491691480754.699887-CDS-H-paniculata_contig14590:5611..5749Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14590 5612..5749 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig14590.2752.1

>prot_H-paniculata_contig14590.2752.1 ID=prot_H-paniculata_contig14590.2752.1|Name=mRNA_H-paniculata_contig14590.2752.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=349bp
MSIGVPKEVMPREKRVAQTPDTVGKLTKLGITVNVEAGAGEPSKCSDDRY
VAAGAKIVNRDAVWKSDLVIKVNPPTEEEATMLGSRAVMSLFWPAQNTAL
LEQMAKQGATVLAMDQLPRTLSRGQSFDVLSSQANITGYRAVLEAAHHFD
RFFAGQTTAAGRIPPAKVLVLGGGVAGLAAVQAAKNMGAIVKAFDVRPAV
KEQIESLGGEFLEVDVQEDGSGAGGYAKEMSKEWFAAAERMLAAEVKDMD
VVIGTALIPGRPAPRLVTEAMVHSMKAGSVTVDLAAATGGNIGTTRADEA
RAIVYKTDNGATCIGYTDMSSRLANTASTLFSNNAVKLFCSAGPFSTG*
back to top

mRNA from alignment at H-paniculata_contig14590:648..5749+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig14590.2752.1 ID=mRNA_H-paniculata_contig14590.2752.1|Name=mRNA_H-paniculata_contig14590.2752.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5102bp|location=Sequence derived from alignment at H-paniculata_contig14590:648..5749+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATCCTATACAGCGAGATGAGCATCGGAGTGCCAAAGGAGGTGATGCCTCG CGAAAAGAGGGTGGCCCAGACACCGGACACGGTTGGAAAGTTGACGAAGC TCGGCATCACGGTCAACGTGGAGGCTGGCGCGGGAGAGCCATCCAAGTGC TCAGACGACCGCTACGTGGCTGCGGGGGCGAAGATCGTCAACAGGGACGC GGTAAGGTTTTAATTTTTCTCTTCCTTCGTTGTCTTTTTCGTTTTATTCG AGATTTGGATAGTAACGGGAAATTGTTGCGAATGTGCCGCCGACCCTAAT CATACACAAAATATGAGGCAGGAGAGAGCTTGAAAGCTTTGGTGGGTAAG CGGCCTCCCTGTTTTGGGGCCATTTATTTTTTTGTTTTGCGGTCGAAGAT TTCCTGTGTTTATTGTATGGTTCGTGCGTTGGCATTCCATGCGGTTTGCT GCCCTTTTGCTATAGTCTTGTGCATGGTGAATCGTATGCAGACTCGCCCT GGAAGGTGAAGCCATGTCCCAGTTGTCCCCCTCTTCTGGTCTGATGCACC ATGGCAGCTACATTATTCACACTATGCAAAAGGTGCCTGCCTGCGGTCGT TTAGGCCACGAGAACTCGCTGGCCTGCTCTTCATCTACTCACTGGACCCT CATTACCCTCCCCACCCCCCTTCGTCCGTCCCTGTCCCCATTGCTCAGGT ATGGAAATCCGATTTAGTGATAAAGGTCAACCCTCCCACAGAGGAAGAGG CCACGATGCTCGGCTCCAGGGCGGTTATGTCGCTCTTCTGGCCTGCCCAG AACACAGCGCTGCTGGAGCAGATGGCGAAGCAGGGCGCAACGGTTCTGGC CATGGACCAACTACCGCGGACGCTAAGCCGGGGACAGGTGCACACGTGGT TGGACGGGGGTGGGGAGGTTGGGCTTGCAGTTGCTCGACTGGCTTGACCT GTGTGTTTTCCAAGTTTTATTCATTTGTGGCCCTGTCCCTAAGGATATTA AACGTGGGAATTTCGGGAGAGGTGGGGGGGGGGGATGACGATTTCATGGG GTTAGCGGTTATCCTTGGCAGCAGGAGATACTACTGTAGCTAGGTGCCTC ATCATAGCTGCCCGGTCATTGTTTCACGTACGTCGCGATTCATCTTGCTT TTTCACGGGAACACACGCCACAATTGCTTAGAGCGAAACGTTTGCGGGGC TACACCCCATCCTCCACCCCCCTTTCCCCTTCCCTCCTCCATGCGTAGTT TTAGCGGCATCCTCCCCGTACACTCCAACTCACTTGACCGCTACGCCTCC GTATCAACGATACCCTTACTGCCCCACCGCCCCTCTTGTGTTCGTTCGCA CGATGAAGTCATTTGATGTGTTGAGCTCCCAAGCCAACATCACGGGCTAC CGCGCCGTCCTGGAGGCTGCGCACCACTTTGACCGCTTCTTCGCGGGGCA GACGACGGCGGCCGGCCGTATCCCGCCTGCAAAGGTAAGAAAAGGACTCC GCGAGGGGGGGGAAGGGGTATTGCCGTTTTGACGTCATCCATTATACACT TTTCACTATTTGACCGACTTGGCAAGGCGGGCGTTGATCAATGCAAAACA AAGAATCGTACACGACAGAGGGTGGCGGTCTTTCTTTTTTTCTGATTTTT CTTGTTGTTTAGGTACGGTAGATCAGGGTTGAGTGACAAGCACGGTACTA TGTTGCCGAGACAAGGGTGGGCAGTAGTACGCTGCGGCCTTCCTGATTTG TGCCAGTTGCCTATTAAGGAGTGGTTTCTTGAGGGAGGATCGCGGTGTAC CAGTGTGTTGTATCCACCGATCATCATGTACGCTCTTGTTTTGATTTCTT GCCCTGTGGGTAGGCTAGCAACAAACATCAGGGTGGTTAAGGCAAACAGA AAATGCAATACGAGCATACTGTAGCCATGCACGTCATGCAGAGTAACTCT TCTATTTAAATGTGGTTAAGTACAATGCGAATTGCGATACCCGTTTCTTT GACACTTTGTCGTGAAGGGAAAACATATAATACCCTGAAATATTGTTTAT TGGAATATGACAATCTTAAAATATCCTTGCTTTGGAAAATGGACCAACGA TATCTGCATACGTCATGTCGTTGTTGATGAAAGGGACACATCGCCAAACG TGCAAGATCTAAATGGCTCGGCTGGTGGACCGATGGATCATTTTGATGCC GGACCAACGATGCACACATCTAAACATGACGGGAACCCCCCCCCCCCCCC CCCAGCCAGGTAAAACTCGATGCATGGACGATGGACACAGCTGGCCTAAA GACGTCACTGCGAACTCAGCCTTCAATTTTTCCCTCAAAAATCAGATGCT AGCTTGAGCTTGAGGGTATTTTCTTGATTTCATTTAATATAACATAGGAG TTGCTGTTATTACTATTTTTACCTATTGACGTGATTCATCAGGTGCTTGT GCTCGGAGGTGGGGTGGCCGGTCTAGCGGCCGTGCAGGCGGCAAAGAACA TGGGTGCGATCGTGAAGGCGTTCGATGTCAGACCTGCCGTGAAGGAGCAG ATTGAGTCCCTTGGCGGGGAGTTCCTGGAAGTCGACGTTCAAGTGAGAAA ACCTCACGCTCATATCAACGAAGTTGTAGGTTGTCAGTTGTTGAATAATA ACCATGTCGAGCGATGAATATGCCTCGCAGTAAATACATGACAAGGTAAG TTACAGAGAAATGTGCGCATGCCAACAGGCAGGTGAATCGTTATATTTTA AGAGGGGAGGGGGGGGGGGGGGGTTATGTGGATAGTGGGGGATAGGTGTA GTATTTCTTCTGTCGTCACATTATTTCGCCGTCATAGAATTGGCATGAGC AGTGACCGCTGTGGACGCTAACAAGGTGAGTGATGAGGATAAAGTTAATT TCCTGTGAGATACGGTGGTAGTCAACAATTAGTCCACTCGCTGTTTCCTT CTTGAGATATGTGAAGGGTCCAGGCACTCCGTCTTTGACGGGGTGAGTCC TACCCCTCAAATTGGTCATGATGTAATTTTGCTGAAAGTGAAGTTCGAAG CTGGCTGCACAGCCTTAGTTAACATGGGTACAATTGGATATATTATTTGA GCTTCAAAGCTATAATTCAACTAACTCTGGCGGGGTTGACGAACGAATGA GAATACTGATGGATGAACCCTCCACTACCCTCCGGTGCTAATGGAGCCAT CGGTAATATACTTGGAGTTTAGCGTGGTCGGGACGAGCGAAAAATATTAC GTCGTTTCCTCGGCCTCTATATAGTAAGTATTATCAAATGCCACGTAAAT ACATCTTCCAGTATTTTGAGAGTCTCGCGTTTTTTTTTTGCAGTATTTTT ATGTAAAAAAAAAAAAGAACTGACCGAATTTGATGCTTATTTTTTCACGC TTTGATTGTTTGTTGTTACCAGGAAGATGGTTCGGGGGCCGGAGGCTACG CCAAGGAGATGTCGAAGGAGTGGTTCGCGGCGGCAGAGCGAATGCTGGCG GCGGAGGTGAAGGACATGGACGTCGTTATCGGCACCGCACTCATCCCTGG AAGGCCGGCGCCTCGGCTCGTCACGGAGGTGGGTGAAATGCGGTTAGCTT TTTTTTCTTCCTGAAGAGATTCCTGGTTGTAGATTGTTTTTCTATAGGTC GAATTATCGATTCACGCCTATGATACTGAATGTGGGTGATCTGTATAGAC AAGTCATTCGATTGCAGTACACTCCATGTTGTGGAAGGATTTCGTTTGTT GCAATTGTGCGTGTTTCCATCACGCTGCGCCCGGAGCAGTTTGCTGTTAA CAGTGCAGCACCTCGAAGCCCTGCAGTGAGCCCCCCCCCCCCCCCCAGTG ATTTAATAATTAAAGTGTGAACAAATGTACTTCAAAGTTAGAAATATAAC ATGAATACGGTGGCAATGGAGGTATCATGTTCGCTTCAGAGGTAAAGTTC AACTAACTGAACCCCCTTTTGTCATTCACCCACCCATATACCGTATGTGT GACGCTGTTGTAGTCTTTTTTTGTTATTGCGCAAGCCAAACTGTTGTCTC CATCCTATCTGCTTTTGATCTGTCGTCTCCATCGTCGTCGTCGATGACGG TGTTGTTGTATGCAGGCTATGGTGCATTCGATGAAGGCTGGAAGCGTTAC GGTCGATCTCGCAGCAGCCACGGGCGGTAACATCGGGACCACCAGGGCGG ACGAGGCAAGGGCAATTGTGCACATGATCAGTTCAGTCGTGGATATAGAG AGCATTTGCGTGAAAACCAATTCCTTCCGCAATTTTTTCGATTTGGTCGT GTATAGCTAACAGGAAGCTCCTCTTGCAGACCCCCTTCGAACCTCGGCTC ACCCGTGCCAACGTCTCGTGACGAAAGGAATACCTCTTCCGTGAGAGCAT ACGAATAGTCACCGGTTGTAACGAGGAGTTCGTTTTGTGAGGAGACATAA GGTGTAGGTGAACTGGGGTCCGAGACGAGAAGCTCACTGTTAGCTAAACA CGATCAAATCGAAATGTGCGAAAGGATTTCGTATTGCGCGAAGACTATTT TGTTATTTTCGTATTTTTGTGGTCGTTTCTTGTGCTTGTTGGAATTTTTT ATTGGTGGCGCGACTCTCGTACATTCGATGGGAGATGGCTTTTGCTACAG TCGCTCCGGTTTAGCTCCGCTGTACGTCTCAAGTCTTTTAGAGCAGAGGA CCAACCGTCGTTGCTCAAGTTTTATGGAATCTGATGCTGTACCCTTGCGG TACGAATAAAACTCTCTTCGTTCGCACGCAAAAGCAGCTGTGTGTCTCTA TAGTTGCGACTGGAACGAGCCACCAATGTAGCTCTCTCTGTAGCTCTCCC TATAACCCCAGTTCATATGATGATGATTGATCTAATTTTGAACTGTAGCC CCCCCTTCCCCTCCCTGTCCTGTCGACGGAACAAACCGGTCACACACACT CCATGAAATGACAGGTGTACAAAACGGATAACGGCGCAACTTGCATCGGA TACACGGATATGTCTAGCAGGCTGGCCAACACGGCCTCCACGCTATTCTC GAACAACGCCGTCAAGTTGTTCTGTTCCGCGGGTCCCTTCAGCACCGGGT GA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig14590:648..5749+

>mRNA_H-paniculata_contig14590.2752.1 ID=mRNA_H-paniculata_contig14590.2752.1|Name=mRNA_H-paniculata_contig14590.2752.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2094bp|location=Sequence derived from alignment at H-paniculata_contig14590:648..5749+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGCATCGGAGTGCCAAAGGAGGTGATGCCTCGCGAAAAGAGGGTGGC
CCAGACACCGGACACGGTTGGAAAGTTGACGAAGCTCGGCATCACGGTCA
ACGTGGAGGCTGGCGCGGGAGAGCCATCCAAGTGCTCAGACGACCGCTAC
GTGGCTGCGGGGGCGAAGATCGTCAACAGGGACGCGATGAGCATCGGAGT
GCCAAAGGAGGTGATGCCTCGCGAAAAGAGGGTGGCCCAGACACCGGACA
CGGTTGGAAAGTTGACGAAGCTCGGCATCACGGTCAACGTGGAGGCTGGC
GCGGGAGAGCCATCCAAGTGCTCAGACGACCGCTACGTGGCTGCGGGGGC
GAAGATCGTCAACAGGGACGCGGTATGGAAATCCGATTTAGTGATAAAGG
TCAACCCTCCCACAGAGGAAGAGGCCACGATGCTCGGCTCCAGGGCGGTT
ATGTCGCTCTTCTGGCCTGCCCAGAACACAGCGCTGCTGGAGCAGATGGC
GAAGCAGGGCGCAACGGTTCTGGCCATGGACCAACTACCGCGGACGCTAA
GCCGGGGACAGGTATGGAAATCCGATTTAGTGATAAAGGTCAACCCTCCC
ACAGAGGAAGAGGCCACGATGCTCGGCTCCAGGGCGGTTATGTCGCTCTT
CTGGCCTGCCCAGAACACAGCGCTGCTGGAGCAGATGGCGAAGCAGGGCG
CAACGGTTCTGGCCATGGACCAACTACCGCGGACGCTAAGCCGGGGACAG
TCATTTGATGTGTTGAGCTCCCAAGCCAACATCACGGGCTACCGCGCCGT
CCTGGAGGCTGCGCACCACTTTGACCGCTTCTTCGCGGGGCAGACGACGG
CGGCCGGCCGTATCCCGCCTGCAAAGTCATTTGATGTGTTGAGCTCCCAA
GCCAACATCACGGGCTACCGCGCCGTCCTGGAGGCTGCGCACCACTTTGA
CCGCTTCTTCGCGGGGCAGACGACGGCGGCCGGCCGTATCCCGCCTGCAA
AGGTGCTTGTGCTCGGAGGTGGGGTGGCCGGTCTAGCGGCCGTGCAGGCG
GCAAAGAACATGGGTGCGATCGTGAAGGCGTTCGATGTCAGACCTGCCGT
GAAGGAGCAGATTGAGTCCCTTGGCGGGGAGTTCCTGGAAGTCGACGTTC
AAGTGCTTGTGCTCGGAGGTGGGGTGGCCGGTCTAGCGGCCGTGCAGGCG
GCAAAGAACATGGGTGCGATCGTGAAGGCGTTCGATGTCAGACCTGCCGT
GAAGGAGCAGATTGAGTCCCTTGGCGGGGAGTTCCTGGAAGTCGACGTTC
AAGAAGATGGTTCGGGGGCCGGAGGCTACGCCAAGGAGATGTCGAAGGAG
TGGTTCGCGGCGGCAGAGCGAATGCTGGCGGCGGAGGTGAAGGACATGGA
CGTCGTTATCGGCACCGCACTCATCCCTGGAAGGCCGGCGCCTCGGCTCG
TCACGGAGGAAGATGGTTCGGGGGCCGGAGGCTACGCCAAGGAGATGTCG
AAGGAGTGGTTCGCGGCGGCAGAGCGAATGCTGGCGGCGGAGGTGAAGGA
CATGGACGTCGTTATCGGCACCGCACTCATCCCTGGAAGGCCGGCGCCTC
GGCTCGTCACGGAGGCTATGGTGCATTCGATGAAGGCTGGAAGCGTTACG
GTCGATCTCGCAGCAGCCACGGGCGGTAACATCGGGACCACCAGGGCGGA
CGAGGCAAGGGCAATTGCTATGGTGCATTCGATGAAGGCTGGAAGCGTTA
CGGTCGATCTCGCAGCAGCCACGGGCGGTAACATCGGGACCACCAGGGCG
GACGAGGCAAGGGCAATTGTGTACAAAACGGATAACGGCGCAACTTGCAT
CGGATACACGGATATGTCTAGCAGGCTGGCCAACACGGCCTCCACGCTAT
TCTCGAACAACGCCGTCAAGTTGTTCTGTTCCGCGGGTCCCTTCAGCACC
GGGTGAGTGTACAAAACGGATAACGGCGCAACTTGCATCGGATACACGGA
TATGTCTAGCAGGCTGGCCAACACGGCCTCCACGCTATTCTCGAACAACG
CCGTCAAGTTGTTCTGTTCCGCGGGTCCCTTCAGCACCGGGTGA
back to top