prot_H-paniculata_contig1459.2750.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1459.2750.1
Unique Nameprot_H-paniculata_contig1459.2750.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length366
Homology
BLAST of mRNA_H-paniculata_contig1459.2750.1 vs. uniprot
Match: A0A6H5JYU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYU7_9PHAE)

HSP 1 Score: 255 bits (652), Expect = 3.060e-77
Identity = 149/275 (54.18%), Postives = 164/275 (59.64%), Query Frame = 0
Query:   18 DRFLGALVVVCASAVIGAVGAHAGSTLSSLFRFAGGGGGRFGDKHRATXXXXXXXXKLRRGRACAPPFPNAVDSDXXXXXXXXXXXXXXDAYHVYAHGARSVGSGDDEWRAAGRGARERRGDGGDVGRSXXXXXXXSVLHVGSCHCGGLMFEVDAPAHLVAIEGPSKVRYPFITVPADQFRLTSDDSNGSLYLLKCRPPAGQDTTPKVSAHFFCRRCGVHVVHAPDFPHAAVADVNVHCIRPETIKSLAVGFMKGGGAEVPGMGDPVQGVYEVNK 292
            DR LG LV  CASA++ A+GA AG             G  F    R          K R  R                       XXX DAY  YAHG+RS              A  R       GR         VLH GSCHCGGL FEV+AP HL AIEGPSKVRYPFITVPA+QFRLTSDD+NGSLYLL+ RPPAG D TPKVSAHFFCRRCGVH+VHAPDFPHAAVADVNVHCI P TIKSLAV F + GG E+PG+GDPV+G+YE  +
Sbjct:   15 DRVLGVLVAACASALLVALGARAGXXX----------GASFTTLLRLAYQGSSTSSKRRSSRXXX--------------------XXXGDAYFEYAHGSRST-------------AAARXXXXXXAGRGGL------VLHAGSCHCGGLAFEVEAPEHLAAIEGPSKVRYPFITVPAEQFRLTSDDTNGSLYLLQYRPPAGSDDTPKVSAHFFCRRCGVHIVHAPDFPHAAVADVNVHCIHPATIKSLAVAFPRRGGGELPGIGDPVEGMYEARR 240          
BLAST of mRNA_H-paniculata_contig1459.2750.1 vs. uniprot
Match: A0A835Z3S2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3S2_9STRA)

HSP 1 Score: 136 bits (342), Expect = 2.950e-32
Identity = 71/156 (45.51%), Postives = 90/156 (57.69%), Query Frame = 0
Query:  155 VLHVGSCHCGGLMFEVDAPAHLVAIEGPSKVRYPFITVPADQFRLTSDDSNGSLYLLKCRPPAGQDTTPK-------------------------VSAHFFCRRCGVHVVHAPDFPHAAVADVNVHCIRPETIKSLAVGFMKGGGAEVPGMGDPVQ 285
            V+H GSCHCG + FEV AP HL A+EG SK+RYPFI VPA +F+LTSD+S  SLYL+K    A     P                          V+AH FC  CGVHV HAP+FP++AVA VN  C+   ++ SLAV  +    A +PG+G P +
Sbjct:   92 VMHTGSCHCGNMTFEVQAPEHLAAVEGGSKLRYPFIIVPAGRFKLTSDESYCSLYLVKSPSAAAPHAQPTLDSSSCXXXXXXXXXXXXXXADVIHVAAHLFCSNCGVHVCHAPNFPNSAVAHVNAQCLDARSVASLAVAVLSDA-ALLPGVGAPAE 246          
BLAST of mRNA_H-paniculata_contig1459.2750.1 vs. uniprot
Match: A0A2A4VQ08_9PROT (Aldehyde-activating protein n=1 Tax=Kordiimonadales bacterium TaxID=2030814 RepID=A0A2A4VQ08_9PROT)

HSP 1 Score: 74.3 bits (181), Expect = 1.160e-12
Identity = 43/122 (35.25%), Postives = 61/122 (50.00%), Query Frame = 0
Query:  155 VLHVGSCHCGGLMFEVDAPAHLVAIEGP----SKVRYPFITVPADQFRLTSDDSNGSLYLLKCRPPAGQDTTPKVSAHFFCRRCGVHVVHAPDFPHAAVADVNVHCIRPETIKSLAVGFMKG 272
            V H GSCHCG + FEVDAPA + A+       ++  +  + V  D FR+T+ + N + Y  K R           + H FC+ CGV   + P   H     VN++CI PET+ S+  G   G
Sbjct:    4 VTHKGSCHCGSVAFEVDAPADIDAVSCTCSICTRTGFIHVFVGRDAFRITAGEDNLTEYRFKTR----------TAKHLFCKTCGVKAFYVPR-SHPNGWSVNLNCIDPETVTSVKQGEFDG 114          
BLAST of mRNA_H-paniculata_contig1459.2750.1 vs. uniprot
Match: A0A7Y3CPG4_9GAMM (GFA family protein n=1 Tax=Woeseiaceae bacterium TaxID=2026806 RepID=A0A7Y3CPG4_9GAMM)

HSP 1 Score: 67.8 bits (164), Expect = 2.660e-10
Identity = 41/117 (35.04%), Postives = 55/117 (47.01%), Query Frame = 0
Query:  155 VLHVGSCHCGGLMFEVDAPAHLVAIEGPSKV----RYPFITVPADQFRLTSDDSNGSLYLLKCRPPAGQDTTPKVSAHFFCRRCGVHVVHAPDFPHAAVADVNVHCIRPETIKSLAV 267
              H GSCHCG + FEVDAPA + A +    +     +  + V A  FRL   +   S Y               V+ H+FCR CG+   + P   H     VNVHC+  ETI+S+ V
Sbjct:    2 TTHKGSCHCGQVRFEVDAPATIRADDCNCSICRKSGFLHLLVSAADFRLLQGEDELSSYTFNTG----------VAKHYFCRHCGIKSFYIPR-SHPEGVSVNVHCLEMETIESIEV 107          
BLAST of mRNA_H-paniculata_contig1459.2750.1 vs. uniprot
Match: A0A2E6E9Y8_9GAMM (Aldehyde-activating protein n=1 Tax=Woeseia sp. TaxID=1980636 RepID=A0A2E6E9Y8_9GAMM)

HSP 1 Score: 66.2 bits (160), Expect = 1.060e-9
Identity = 41/117 (35.04%), Postives = 54/117 (46.15%), Query Frame = 0
Query:  155 VLHVGSCHCGGLMFEVDAPAHLVAIEGPSKVRY----PFITVPADQFRLTSDDSNGSLYLLKCRPPAGQDTTPKVSAHFFCRRCGVHVVHAPDFPHAAVADVNVHCIRPETIKSLAV 267
            V+H GSCHCG + FEVDAP +L   E    + Y      I VP  +FRL       ++Y              KV+ H+FC  CGV   + P   H     VN  C+  ET+ S+ V
Sbjct:    2 VVHRGSCHCGKVKFEVDAPTNLEISECNCSICYMVGFQHIHVPKSRFRLLEGKDVLAVYKFNT----------KVARHYFCPYCGVKSFYVPR-SHPDGISVNARCLNQETVSSIQV 107          
BLAST of mRNA_H-paniculata_contig1459.2750.1 vs. uniprot
Match: A0A661DA95_9GAMM (GFA family protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661DA95_9GAMM)

HSP 1 Score: 63.9 bits (154), Expect = 6.170e-9
Identity = 41/117 (35.04%), Postives = 57/117 (48.72%), Query Frame = 0
Query:  155 VLHVGSCHCGGLMFEVDAPAHLVAIEGP----SKVRYPFITVPADQFRLTSDDSNGSLYLLKCRPPAGQDTTPKVSAHFFCRRCGVHVVHAPDFPHAAVADVNVHCIRPETIKSLAV 267
            + H GSCHCG ++FEV+AP HL  +E      SK  Y  + VP  QF L     N    L+K      Q+       H+FC+ CG+   + P      V+ VNV C+   TIK + +
Sbjct:    1 MKHKGSCHCGAVVFEVEAPEHLHVLECNCSICSKSGYLHLIVPKSQFNLLKGSDN----LVKYTFDTHQEK------HWFCQTCGIKSFYIPRSNPDGVS-VNVRCLDSSTIKRIDI 106          
BLAST of mRNA_H-paniculata_contig1459.2750.1 vs. uniprot
Match: A0A7S1Y434_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y434_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 8.960e-9
Identity = 38/106 (35.85%), Postives = 54/106 (50.94%), Query Frame = 0
Query:  155 VLHVGSCHCGGLMFEVDAPAHLVAIEGPSK--VRYPFITVPADQFRLT-SDDSNGSLYLLKCRPPAGQDTTPKVSAHFFCRRCGVHVVHAPDFPHAAVADVNVHCI 257
            ++H G CHC  + FE+ AP  L       +  ++YPF+T  A  F+L    D  G  Y+           +  V+AH FC+RCGVHV+ APD  H     VN +C+
Sbjct:  136 MMHRGHCHCKAIEFELLAPKLLRTTISSQRGEIQYPFVTTEAPNFKLVRGSDVLGIYYVSVPTVTKSPGISATVAAHSFCKRCGVHVLQAPD-SHTNSLRVNANCL 240          
BLAST of mRNA_H-paniculata_contig1459.2750.1 vs. uniprot
Match: A0A8J7J3I8_9CYAN (GFA family protein n=1 Tax=Lusitaniella coriacea LEGE 07157 TaxID=945747 RepID=A0A8J7J3I8_9CYAN)

HSP 1 Score: 62.8 bits (151), Expect = 1.580e-8
Identity = 39/115 (33.91%), Postives = 59/115 (51.30%), Query Frame = 0
Query:  155 VLHVGSCHCGGLMFEVDAPAHLVAIEGP----SKVRYPFITVPADQFRLTSDDSNGSLYLLKCRPPAGQDTTPKVSAHFFCRRCGVHVVHAPDFPHAAVADVNVHCIR--PETIK 263
            +++ GSCHCG + FEV+AP HL   E      SK  Y  + VP ++F+L S + N + Y  +            V+ H FC+ CG+   + P      V DVNV C+   P+++K
Sbjct:    1 MIYQGSCHCGAITFEVEAPEHLEVDECNCSICSKSGYLHLIVPKNKFKLLSGEDNLATYTFQTG----------VAKHKFCKTCGIKSFYIPRSNPDGV-DVNVRCLETLPKSMK 104          
BLAST of mRNA_H-paniculata_contig1459.2750.1 vs. uniprot
Match: A0A5C8ZZI6_9GAMM (GFA family protein n=1 Tax=Parahaliea maris TaxID=2716870 RepID=A0A5C8ZZI6_9GAMM)

HSP 1 Score: 62.8 bits (151), Expect = 1.580e-8
Identity = 39/112 (34.82%), Postives = 53/112 (47.32%), Query Frame = 0
Query:  155 VLHVGSCHCGGLMFEVDAPAHLVA----IEGPSKVRYPFITVPADQFRLTSDDSNGSLYLLKCRPPAGQDTTPKVSAHFFCRRCGVHVVHAPDFPHAAVADVNVHCIRPETI 262
            ++H GSCHCG + FEVDAP  + A         K  Y  + VP  +FRL S + + S Y               V+ H FC +CG+   + P      V DVNVHC+  E +
Sbjct:    1 MIHQGSCHCGAVTFEVDAPEVIEADYCNCSICKKSGYLHLIVPLGKFRLLSGEDSLSTYTFNTG----------VAQHTFCTQCGIKPFYTPRSNPDGV-DVNVHCLDTENL 101          
BLAST of mRNA_H-paniculata_contig1459.2750.1 vs. uniprot
Match: A0A7S2UKU5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UKU5_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.870e-8
Identity = 35/91 (38.46%), Postives = 48/91 (52.75%), Query Frame = 0
Query:  156 LHVGSCHCGGLMFEVDAPAHLVAIEGPSKVRYPFITVPADQFRLTSDDSNGSLYLLKCRPPAGQDTT--PKVSA-HFFCRRCGVHVVHAPD 243
            LH+GSCHC  + FE+ AP+   A +   K+RYP +      F LT    +   Y ++  P    D    P V+A H FC  CGVH++ APD
Sbjct:  118 LHLGSCHCRSIHFELGAPSSPQAYDCNGKIRYPHLRTTEQNFMLTKGTEHLKTYYVRL-PSLSHDRKDGPGVTAAHAFCTVCGVHILRAPD 207          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1459.2750.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JYU7_9PHAE3.060e-7754.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z3S2_9STRA2.950e-3245.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2A4VQ08_9PROT1.160e-1235.25Aldehyde-activating protein n=1 Tax=Kordiimonadale... [more]
A0A7Y3CPG4_9GAMM2.660e-1035.04GFA family protein n=1 Tax=Woeseiaceae bacterium T... [more]
A0A2E6E9Y8_9GAMM1.060e-935.04Aldehyde-activating protein n=1 Tax=Woeseia sp. Ta... [more]
A0A661DA95_9GAMM6.170e-935.04GFA family protein n=1 Tax=Gammaproteobacteria bac... [more]
A0A7S1Y434_9STRA8.960e-935.85Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A8J7J3I8_9CYAN1.580e-833.91GFA family protein n=1 Tax=Lusitaniella coriacea L... [more]
A0A5C8ZZI6_9GAMM1.580e-834.82GFA family protein n=1 Tax=Parahaliea maris TaxID=... [more]
A0A7S2UKU5_9STRA1.870e-838.46Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.170.150.70coord: 158..274
e-value: 8.5E-9
score: 37.3
NoneNo IPR availablePANTHERPTHR28620FAMILY NOT NAMEDcoord: 152..299
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 21..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 33..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..366
NoneNo IPR availableTMHMMTMhelixcoord: 20..42
IPR011057Mss4-like superfamilySUPERFAMILY51316Mss4-likecoord: 144..259

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1459contigH-paniculata_contig1459:14902..20250 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1459.2750.1mRNA_H-paniculata_contig1459.2750.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1459 12626..20250 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1459.2750.1 ID=prot_H-paniculata_contig1459.2750.1|Name=mRNA_H-paniculata_contig1459.2750.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=366bp
MRRSSSMRSEPTSNTQTDRFLGALVVVCASAVIGAVGAHAGSTLSSLFRF
AGGGGGRFGDKHRATKKKSSRRRKLRRGRACAPPFPNAVDSDDDDDDSNS
EREGEGDAYHVYAHGARSVGSGDDEWRAAGRGARERRGDGGDVGRSSSSS
SSSSVLHVGSCHCGGLMFEVDAPAHLVAIEGPSKVRYPFITVPADQFRLT
SDDSNGSLYLLKCRPPAGQDTTPKVSAHFFCRRCGVHVVHAPDFPHAAVA
DVNVHCIRPETIKSLAVGFMKGGGAEVPGMGDPVQGVYEVNKEAWSDAMR
EKVDAALQQQQQQPSNLERSGAGGQTSNRVPSPRRRPSSGPARRGTAGGD
REAASSRTLSDGGVVG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011057Mss4-like_sf