prot_H-paniculata_contig14569.2737.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14569.2737.1
Unique Nameprot_H-paniculata_contig14569.2737.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length622
Homology
BLAST of mRNA_H-paniculata_contig14569.2737.1 vs. uniprot
Match: A0A6H5JJD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJD0_9PHAE)

HSP 1 Score: 279 bits (713), Expect = 2.320e-77
Identity = 243/671 (36.21%), Postives = 309/671 (46.05%), Query Frame = 0
Query:    1 YLQVLTEAWRSTRVRVTIEDCTPRTALIASFGGEPTPSRHELLAPATLDR--NGTCGMDVITRPSYVRDGFWHFAVVGGLPLRSQRYFAGPPDTLDFEVAIIAEPVLYPWLDRGLAPPLLAGVDDDDDYESCLRIRASPPVPIPMIAEQVSVGIAAASAAGVEDNSTRYGGNFLPKVGDFVSTGSSSSLASGSR------------------------WLGMFTVGAYSEIVVVNFEVAALRGGGATAAQGGXXXXXXXXXXXXXXXXXXXXXXXXXHLEK-SAQRGDSRRLLQTLHGQWSLAGVEGEEPRTAGEGLTAGVVLVESA---GFNVGRVSGNVNGADVVGNSDGDXXXXXXXXGAPGRVLADGGKGQGYPGPCVVKVCAAAT-IVPYWDQEGMEGGAPVEPEEGRM-----VCSSVTVVDANDGEATPILGALELPIRPQAGRWYVTGRASCENSDMPDNPRPLSGDGXXXXXXXXXGQVSIGGNAKPVVVEGGG-----QSPTRATRPSVVDAVDVDVDNVDVAADGPGFGDGPISLQRDWAHVEWSGEELLPE--------RQARLEREGSCGLSAAARESGDPGVAETAFVLSAAVVAQSCPSGRVGVDGLGVRRVASQHSADRRDGRVGGEDAGPTRVSCIGEAFPTVMTRKGAAAVYE 622
            Y QVLTEAW+STRVRV+IEDCTPRTA+IA+FG EPTPSRHELLA A  D   NGTCG+DVITRPSY RDG WHFAVVGG PLR  RYFAGPPDTL F+ A+IA+  +YP LDRG+A    A  D       CLR  A PPV +P I      G + +   G     +R  G+FLP +G F + G++       R                        WLG FT+ AY E V + FEVAA+  GG+ A    XXXXXXXX                  ++  +   G                                   L E A   G   GR +G+ +GA      DG         G       D   G      C V VCAAA  IV    ++  +G A V  E+  +     VC SV V     G+   + G L+LP RPQ GRWY+T RA+CE +      +  S               S     + V   GGG                   V  +V+  ++ + G G+G   +SLQRDWAHVEWS + L+P+        R+   + +G  G  A    +G     + AFV  AA   ++CP G VGV G+ +R V +   A   DG          R SC+G   P +M R GAA ++E
Sbjct:   63 YFQVLTEAWQSTRVRVSIEDCTPRTAVIAAFGAEPTPSRHELLAHAMPDLAGNGTCGVDVITRPSYSRDGVWHFAVVGGSPLRGDRYFAGPPDTLAFQAAVIADSAVYPTLDRGVA----ASGD-------CLRKVAVPPVVVPTITGPP--GSSVSRRGGGXGQGSR--GSFLPTLGRFPAGGAAEKTEGKDRGGGDGEEEDARHAAAATALLLSPSWLGAFTLSAYDESVTIPFEVAAIVDGGSEADGXXXXXXXXXXGTGQGLVGRALGANGTADVKLLTTDYGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTERAAGYGQGKGRAAGDQSGA-----GDGGEEKEETHQGREEERSLDNDDGG-----CEVTVCAAAARIVLGIGEQDDDGDAEVPQEDSSVGGQQRVCRSVVV----GGQGAAVSGTLDLPDRPQTGRWYLTARAACEAAPGTAGHKQRSL--RRSTVGADVPTTSAASQDEGVPGTGGGVPSXXXXXXXXXXXXXXXXVGQEVEEKNIYS-GTGWGLEVMSLQRDWAHVEWSADFLVPDGGDGGGDARRGGDDGKGEGGREACTSAAGG----KDAFVFRAAAFTEACPRGAVGVGGVDLRPVTAAAEAGVGDGAAAAARESH-RFSCVGAELPMLMRRDGAARIHE 696          
BLAST of mRNA_H-paniculata_contig14569.2737.1 vs. uniprot
Match: D8LS69_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS69_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 1.440e-52
Identity = 108/180 (60.00%), Postives = 124/180 (68.89%), Query Frame = 0
Query:    1 YLQVLTEAWRSTRVRVTIEDCTPRTALIASFGGEPTPSRHELLAPATLD--RNGTCGMDVITRPSYVRDGFWHFAVVGGLPLRSQRYFAGPPDTLDFEVAIIAEPVLYPWLDRGLAPPLLAGVDDDDDYESCLRIRASPPVPIPMIAEQVSVGIAAASAAGVEDNSTRYGGNFLPKVGDF 178
            Y QVLTEAW+STRVRV+IEDCTPRTA+IA+FG EPTPSRHELLA A  D   NGTCG+DVITRPSY RDG WHFAVVGG PLR  RYFAGP DTL F+ A+IA+  +YP LDRG+A    A  D       CLR  A PPV +P I      G +A+   G     +R  G+FLP +G F
Sbjct:   63 YFQVLTEAWQSTRVRVSIEDCTPRTAVIAAFGAEPTPSRHELLAHAMPDVAGNGTCGVDVITRPSYSRDGVWHFAVVGGSPLRGDRYFAGPADTLAFQAAVIADSAVYPTLDRGVA----ASGD-------CLRKVAVPPVVVPTITGPP--GSSASRRVGGGGQGSR--GSFLPTLGRF 227          
BLAST of mRNA_H-paniculata_contig14569.2737.1 vs. uniprot
Match: D8LS70_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS70_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 1.990e-9
Identity = 48/130 (36.92%), Postives = 66/130 (50.77%), Query Frame = 0
Query:  503 ISLQRDWAHVEWSGEELLPE--------RQARLEREGSCGLSAAARESGDPGVAETAFVLSAAVVAQSCPSGRVGVDGLGVRRVASQHSADRRDGRVGGEDAGPT--RVSCIGEAFPTVMTRKGAAAVYE 622
            +SLQRDWAHVEWS + L+P+        R+   + +G  G  A    +G     E AFV  AA   ++CP G VGV G+ +R V +   A   +G      A     R SC+G   P +M R GAA ++E
Sbjct:    1 MSLQRDWAHVEWSADFLVPDVGDGGGDARRGGDDGKGEGGREACTSAAGG----EDAFVFRAAAFTEACPRGAVGVGGVDLRPVTAAAEAGFGEGAAATAAAATESHRFSCVGAELPMLMRRDGAARIHE 126          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14569.2737.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JJD0_9PHAE2.320e-7736.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS69_ECTSI1.440e-5260.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LS70_ECTSI1.990e-936.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14569contigH-paniculata_contig14569:1162..5874 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14569.2737.1mRNA_H-paniculata_contig14569.2737.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14569 1162..5874 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14569.2737.1 ID=prot_H-paniculata_contig14569.2737.1|Name=mRNA_H-paniculata_contig14569.2737.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=622bp
YLQVLTEAWRSTRVRVTIEDCTPRTALIASFGGEPTPSRHELLAPATLDR
NGTCGMDVITRPSYVRDGFWHFAVVGGLPLRSQRYFAGPPDTLDFEVAII
AEPVLYPWLDRGLAPPLLAGVDDDDDYESCLRIRASPPVPIPMIAEQVSV
GIAAASAAGVEDNSTRYGGNFLPKVGDFVSTGSSSSLASGSRWLGMFTVG
AYSEIVVVNFEVAALRGGGATAAQGGNGGYGGGSGEGKPDRRRQRRRRRR
RHLEKSAQRGDSRRLLQTLHGQWSLAGVEGEEPRTAGEGLTAGVVLVESA
GFNVGRVSGNVNGADVVGNSDGDGGGGGGDGGAPGRVLADGGKGQGYPGP
CVVKVCAAATIVPYWDQEGMEGGAPVEPEEGRMVCSSVTVVDANDGEATP
ILGALELPIRPQAGRWYVTGRASCENSDMPDNPRPLSGDGGGGGGSRGGG
QVSIGGNAKPVVVEGGGQSPTRATRPSVVDAVDVDVDNVDVAADGPGFGD
GPISLQRDWAHVEWSGEELLPERQARLEREGSCGLSAAARESGDPGVAET
AFVLSAAVVAQSCPSGRVGVDGLGVRRVASQHSADRRDGRVGGEDAGPTR
VSCIGEAFPTVMTRKGAAAVYE
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