prot_H-paniculata_contig14568.2736.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig14568.2736.1
Unique Name	prot_H-paniculata_contig14568.2736.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	114

Homology

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BLAST of mRNA_H-paniculata_contig14568.2736.1 vs. uniprot
Match: D7G8D7_ECTSI (ARL1, ARF-like Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D7_ECTSI)

HSP 1 Score: 227 bits (579), Expect = 1.980e-74
Identity = 113/114 (99.12%), Postives = 114/114 (100.00%), Query Frame = 0

Query:    1 MGIVLSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELMAMLE 114
            MGIVLSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERM+IAKQELMAMLE
Sbjct:    1 MGIVLSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMAIAKQELMAMLE 114

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BLAST of mRNA_H-paniculata_contig14568.2736.1 vs. uniprot
Match: B8CE86_THAPS (Adp-ribosylation factor 1 n=15 Tax=Bacillariophyta TaxID=2836 RepID=B8CE86_THAPS)

HSP 1 Score: 209 bits (532), Expect = 2.940e-67
Identity = 101/114 (88.60%), Postives = 110/114 (96.49%), Query Frame = 0

Query:    1 MGIVLSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELMAMLE 114
            MGI++SRVF++LFGSKEVRILILGLDNAGKTTILYRLQNE+D+ +QTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDS+D ERMS+AK EL AMLE
Sbjct:    1 MGIIMSRVFESLFGSKEVRILILGLDNAGKTTILYRLQNESDEAVQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSADVERMSVAKGELAAMLE 114

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BLAST of mRNA_H-paniculata_contig14568.2736.1 vs. uniprot
Match: A0A836CD21_9STRA (ARL1, ARF-like ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD21_9STRA)

HSP 1 Score: 208 bits (529), Expect = 8.150e-67
Identity = 101/114 (88.60%), Postives = 110/114 (96.49%), Query Frame = 0

Query:    1 MGIVLSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELMAMLE 114
            MGI+LS+VFQA+FGSKEVRILILGLDNAGKTTIL RLQNEA+++IQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D ER+ IAKQEL AMLE
Sbjct:    1 MGILLSKVFQAVFGSKEVRILILGLDNAGKTTILLRLQNEAEEDIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADTERLGIAKQELAAMLE 114

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BLAST of mRNA_H-paniculata_contig14568.2736.1 vs. uniprot
Match: A0A7S2DCF0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DCF0_9STRA)

HSP 1 Score: 207 bits (526), Expect = 9.990e-67
Identity = 97/114 (85.09%), Postives = 109/114 (95.61%), Query Frame = 0

Query:    1 MGIVLSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELMAMLE 114
            MGI+ SRVFQ++FGSKEVRILILGLDNAGKTTILY+LQNE D+ I TIPTIGFNVETL+YKNIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+DRER+++A+QEL AMLE
Sbjct:    1 MGIIFSRVFQSIFGSKEVRILILGLDNAGKTTILYKLQNETDEEINTIPTIGFNVETLKYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADRERLNVAQQELQAMLE 114

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BLAST of mRNA_H-paniculata_contig14568.2736.1 vs. uniprot
Match: A0A6U1B3M7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1B3M7_9STRA)

HSP 1 Score: 208 bits (530), Expect = 1.560e-66
Identity = 98/114 (85.96%), Postives = 110/114 (96.49%), Query Frame = 0

Query:    1 MGIVLSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELMAMLE 114
            MGI  SR+FQ +FGSKEVRILILGLDNAGKTTILYRLQNE+D++IQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D+ER+++A+QEL AMLE
Sbjct:   32 MGIFFSRIFQRIFGSKEVRILILGLDNAGKTTILYRLQNESDEDIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADKERLNVAQQELQAMLE 145

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BLAST of mRNA_H-paniculata_contig14568.2736.1 vs. uniprot
Match: A0A7S2DEW5_9STRA (Hypothetical protein n=2 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2DEW5_9STRA)

HSP 1 Score: 207 bits (526), Expect = 2.330e-66
Identity = 97/114 (85.09%), Postives = 109/114 (95.61%), Query Frame = 0

Query:    1 MGIVLSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELMAMLE 114
            MGI+ SRVFQ++FGSKEVRILILGLDNAGKTTILY+LQNE D+ I TIPTIGFNVETL+YKNIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+DRER+++A+QEL AMLE
Sbjct:    1 MGIIFSRVFQSIFGSKEVRILILGLDNAGKTTILYKLQNETDEEINTIPTIGFNVETLKYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADRERLNVAQQELQAMLE 114

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BLAST of mRNA_H-paniculata_contig14568.2736.1 vs. uniprot
Match: F0YGB1_AURAN (Uncharacterized protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YGB1_AURAN)

HSP 1 Score: 206 bits (523), Expect = 6.470e-66
Identity = 100/115 (86.96%), Postives = 109/115 (94.78%), Query Frame = 0

Query:    1 MGIVLSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDN-IQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELMAMLE 114
            MGI+ SRVFQALFGSKEVRILILGLDNAGKTTILY+LQNE DD  I TIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D+ER+++A+QEL AMLE
Sbjct:    1 MGILFSRVFQALFGSKEVRILILGLDNAGKTTILYKLQNETDDEEIMTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADKERLAVARQELQAMLE 115

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BLAST of mRNA_H-paniculata_contig14568.2736.1 vs. uniprot
Match: A0A1E7FFD0_9STRA (Arl1-family small GTPase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFD0_9STRA)

HSP 1 Score: 204 bits (520), Expect = 1.910e-65
Identity = 98/114 (85.96%), Postives = 107/114 (93.86%), Query Frame = 0

Query:    1 MGIVLSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELMAMLE 114
            MGI+ S+VF+ LFGSKEVRILILGLDNAGKTTILYRLQNE+D+ +QTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D ERM +AK EL AMLE
Sbjct:    1 MGILFSKVFETLFGSKEVRILILGLDNAGKTTILYRLQNESDEAVQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADAERMPVAKGELAAMLE 114

[Close]

BLAST of mRNA_H-paniculata_contig14568.2736.1 vs. uniprot
Match: A0A7S3DQ25_9STRA (Hypothetical protein n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DQ25_9STRA)

HSP 1 Score: 205 bits (521), Expect = 7.520e-65
Identity = 98/114 (85.96%), Postives = 109/114 (95.61%), Query Frame = 0

Query:    1 MGIVLSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELMAMLE 114
            MGI++SR+F++LFGSKEVRILILGLDNAGKTTILYRLQNE D+ +QTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D ERMS+A+ EL AMLE
Sbjct:   54 MGILMSRLFESLFGSKEVRILILGLDNAGKTTILYRLQNEGDEVVQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADIERMSVARGELTAMLE 167

[Close]

BLAST of mRNA_H-paniculata_contig14568.2736.1 vs. uniprot
Match: A0A6S9DTD2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9DTD2_HETAK)

HSP 1 Score: 200 bits (509), Expect = 8.740e-64
Identity = 95/114 (83.33%), Postives = 107/114 (93.86%), Query Frame = 0

Query:    1 MGIVLSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELMAMLE 114
            MGI  S++F +LFGSKEVRILILGLDNAGKTTILYRLQN++D+ IQT+PTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D ER+ +A+QEL AMLE
Sbjct:    1 MGIFFSQLFNSLFGSKEVRILILGLDNAGKTTILYRLQNDSDEVIQTVPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADAERVHVARQELSAMLE 114

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig14568.2736.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig14568.2736.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G8D7_ECTSI	1.980e-74	99.12	ARL1, ARF-like Ras superfamily GTPase n=2 Tax=Ecto...	[more]
B8CE86_THAPS	2.940e-67	88.60	Adp-ribosylation factor 1 n=15 Tax=Bacillariophyta...	[more]
A0A836CD21_9STRA	8.150e-67	88.60	ARL1, ARF-like ras superfamily GTPase n=1 Tax=Trib...	[more]
A0A7S2DCF0_9STRA	9.990e-67	85.09	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A6U1B3M7_9STRA	1.560e-66	85.96	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S2DEW5_9STRA	2.330e-66	85.09	Hypothetical protein n=2 Tax=Dictyochophyceae TaxI...	[more]
F0YGB1_AURAN	6.470e-66	86.96	Uncharacterized protein n=2 Tax=Pelagomonadales Ta...	[more]
A0A1E7FFD0_9STRA	1.910e-65	85.96	Arl1-family small GTPase n=1 Tax=Fragilariopsis cy...	[more]
A0A7S3DQ25_9STRA	7.520e-65	85.96	Hypothetical protein n=2 Tax=Amphiprora paludosa T...	[more]
A0A6S9DTD2_HETAK	8.740e-64	83.33	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006689	Small GTPase superfamily, ARF/SAR type	PRINTS	PR00328	SAR1GTPBP	coord: 19..42 score: 60.05 coord: 76..101 score: 45.93
IPR006689	Small GTPase superfamily, ARF/SAR type	PFAM	PF00025	Arf	coord: 6..114 e-value: 1.9E-50 score: 170.7
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..114 e-value: 1.6E-24 score: 97.5
None	No IPR available	GENE3D	3.40.50.300		coord: 18..114 e-value: 1.6E-43 score: 150.1
None	No IPR available	PANTHER	PTHR11711	ADP RIBOSYLATION FACTOR-RELATED	coord: 1..114
None	No IPR available	PANTHER	PTHR11711:SF326		coord: 1..114
None	No IPR available	PROSITE	PS51417	ARF	coord: 11..114 score: 15.41
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 16..97 e-value: 1.4E-16 score: 58.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 14..113

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig14568	contig	H-paniculata_contig14568:3611..6498 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig14568.2736.1	mRNA_H-paniculata_contig14568.2736.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig14568 3611..6498 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig14568.2736.1 ID=prot_H-paniculata_contig14568.2736.1|Name=mRNA_H-paniculata_contig14568.2736.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=114bp
MGIVLSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPT
IGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRE
RMSIAKQELMAMLE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006689	Small_GTPase_ARF/SAR
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase