mRNA_H-paniculata_contig14564.2735.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14564.2735.1 vs. uniprot
Match: D7FZ09_ECTSI (Pellino homolog 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ09_ECTSI) HSP 1 Score: 126 bits (317), Expect = 1.950e-29 Identity = 56/78 (71.79%), Postives = 61/78 (78.21%), Query Frame = 1 Query: 640 GRQADVVQIRCRADPNTDMFQMGRMQGPENDFEVKGPLHQPTPGGKVCGPVSRHAVRFLVDRQQPHRCRIFTGGFNGR 873 G DVV + C+AD DMFQ+GRMQ ENDF V+GPLHQP PGGKVCGPVSR+AVR LVDR PHRCRIFT GFN R Sbjct: 153 GGAEDVVDVPCQADDGCDMFQLGRMQSAENDFAVRGPLHQPKPGGKVCGPVSRYAVRLLVDRSPPHRCRIFTAGFNSR 230
BLAST of mRNA_H-paniculata_contig14564.2735.1 vs. uniprot
Match: A0A6H5L190_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L190_9PHAE) HSP 1 Score: 122 bits (307), Expect = 9.030e-29 Identity = 55/78 (70.51%), Postives = 60/78 (76.92%), Query Frame = 1 Query: 640 GRQADVVQIRCRADPNTDMFQMGRMQGPENDFEVKGPLHQPTPGGKVCGPVSRHAVRFLVDRQQPHRCRIFTGGFNGR 873 G DVV + C+AD DMFQ+GRMQ ENDF V+GPLHQ PGGKVCGPVSR+AVR LVDR PHRCRIFT GFN R Sbjct: 153 GGAEDVVDVPCQADDGCDMFQLGRMQSVENDFAVRGPLHQSKPGGKVCGPVSRYAVRLLVDRTPPHRCRIFTAGFNSR 230
BLAST of mRNA_H-paniculata_contig14564.2735.1 vs. uniprot
Match: A0A7S2RTG5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RTG5_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 5.990e-14 Identity = 37/70 (52.86%), Postives = 46/70 (65.71%), Query Frame = 1 Query: 658 VQIRCRADPNTDMFQMGRMQGPENDFEVKGPLHQPTPGGKVCGPVSRHAVRFLVDRQQPHRCRIFTGGFN 867 V I DP+TDMFQ+GRM P+NDF V+GPLH G +CGPVSR+A R + R P+ R+F GFN Sbjct: 160 VTIEYVPDPSTDMFQIGRMVVPQNDFVVRGPLHMDV-NGVLCGPVSRYACRIVCSRLPPYEARLFAAGFN 228
BLAST of mRNA_H-paniculata_contig14564.2735.1 vs. uniprot
Match: F0Y998_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y998_AURAN) HSP 1 Score: 76.6 bits (187), Expect = 6.050e-12 Identity = 34/70 (48.57%), Postives = 45/70 (64.29%), Query Frame = 1 Query: 658 VQIRCRADPNTDMFQMGRMQGPENDFEVKGPLHQPTPGGKVCGPVSRHAVRFLVDRQQPHRCRIFTGGFN 867 V + D DMFQ+GRM P+NDF V+GPLH + GG +CGPVSR+A R R+ P+ C ++ GFN Sbjct: 405 VTVEYVPDAREDMFQLGRMIVPQNDFVVRGPLHLDS-GGVLCGPVSRYACRLTCSRRPPYECTLYAAGFN 473
BLAST of mRNA_H-paniculata_contig14564.2735.1 vs. uniprot
Match: A0A7S3K112_9STRA (Hypothetical protein n=3 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K112_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 1.490e-11 Identity = 34/70 (48.57%), Postives = 44/70 (62.86%), Query Frame = 1 Query: 658 VQIRCRADPNTDMFQMGRMQGPENDFEVKGPLHQPTPGGKVCGPVSRHAVRFLVDRQQPHRCRIFTGGFN 867 V + D DMFQ+GRM P+NDF V+GPLH + GG +CGPVSR+A R R P C+++ GFN Sbjct: 403 VTVEYIPDAREDMFQLGRMIVPQNDFVVRGPLHLDS-GGVLCGPVSRYACRITCSRLPPFHCKLYAAGFN 471
BLAST of mRNA_H-paniculata_contig14564.2735.1 vs. uniprot
Match: A0A1V9YAW4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YAW4_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 4.210e-8 Identity = 29/63 (46.03%), Postives = 37/63 (58.73%), Query Frame = 1 Query: 679 DPNTDMFQMGRMQGPENDFEVKGPLHQPTPGGKVCGPVSRHAVRFLVDRQQPHRCRIFTGGFN 867 +P DMFQ+GR ND + GPL+ G +SR A R + DRQ PHRCR+F GGF+ Sbjct: 98 NPGLDMFQIGRQPSRYNDISIPGPLYG------ASGTISRFAARLVCDRQLPHRCRLFAGGFD 154
BLAST of mRNA_H-paniculata_contig14564.2735.1 vs. uniprot
Match: A0A225X1M8_9STRA (Protein pellino n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X1M8_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 8.780e-8 Identity = 31/71 (43.66%), Postives = 39/71 (54.93%), Query Frame = 1 Query: 655 VVQIRCRADPNTDMFQMGRMQGPENDFEVKGPLHQPTPGGKVCGPVSRHAVRFLVDRQQPHRCRIFTGGFN 867 V ADPN DMFQ+GRM +NDF + GP G +SR+A R + R+ P CRIF GGF+ Sbjct: 143 VTVTEFHADPNVDMFQIGRMPCRQNDFVIPGPRVG------ASGTISRYAARIVCGREPPFECRIFAGGFD 207
BLAST of mRNA_H-paniculata_contig14564.2735.1 vs. uniprot
Match: A0A0P1AX14_PLAHL (Pellino protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AX14_PLAHL) HSP 1 Score: 63.2 bits (152), Expect = 1.570e-7 Identity = 30/64 (46.88%), Postives = 38/64 (59.38%), Query Frame = 1 Query: 676 ADPNTDMFQMGRMQGPENDFEVKGPLHQPTPGGKVCGPVSRHAVRFLVDRQQPHRCRIFTGGFN 867 ADPN DMFQ+GRM +NDF + GP G +SR+A R L R+ P+ C IF GGF+ Sbjct: 147 ADPNFDMFQIGRMPCAQNDFVIPGPRVG------ASGTISRYAARILCSREPPYECYIFAGGFD 204
BLAST of mRNA_H-paniculata_contig14564.2735.1 vs. uniprot
Match: A0A6S8UDS2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8UDS2_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 4.120e-7 Identity = 30/70 (42.86%), Postives = 38/70 (54.29%), Query Frame = 1 Query: 658 VQIRCRADPNTDMFQMGRMQGPENDFEVKGPLHQPTPGGKVCGPVSRHAVRFLVDRQQPHRCRIFTGGFN 867 V + D DMFQ+GRM P+NDF V+GPLH GG +CGPVSR+A ++ GFN Sbjct: 116 VTVEYVPDAREDMFQLGRMIVPQNDFVVRGPLHLDA-GGVLCGPVSRYACXXXXXXXXXXXXXLYAAGFN 184
BLAST of mRNA_H-paniculata_contig14564.2735.1 vs. uniprot
Match: A0A8J2WLA8_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WLA8_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 5.260e-7 Identity = 30/70 (42.86%), Postives = 38/70 (54.29%), Query Frame = 1 Query: 658 VQIRCRADPNTDMFQMGRMQGPENDFEVKGPLHQPTPGGKVCGPVSRHAVRFLVDRQQPHRCRIFTGGFN 867 V + D DMFQ+GRM P+NDF V+GPLH GG +CGPVSR+A ++ GFN Sbjct: 195 VTVEYVPDAREDMFQLGRMIVPQNDFVVRGPLHLDA-GGVLCGPVSRYACXXXXXXXXXXXXXLYAAGFN 263 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14564.2735.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14564.2735.1 >prot_H-paniculata_contig14564.2735.1 ID=prot_H-paniculata_contig14564.2735.1|Name=mRNA_H-paniculata_contig14564.2735.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=292bp LKYSLSYPSCGGKQPVTSASGLDQCAGWETGPTVAAAESNLSELAGFPDDback to top mRNA from alignment at H-paniculata_contig14564:4950..5825+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14564.2735.1 ID=mRNA_H-paniculata_contig14564.2735.1|Name=mRNA_H-paniculata_contig14564.2735.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=876bp|location=Sequence derived from alignment at H-paniculata_contig14564:4950..5825+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14564:4950..5825+ >mRNA_H-paniculata_contig14564.2735.1 ID=mRNA_H-paniculata_contig14564.2735.1|Name=mRNA_H-paniculata_contig14564.2735.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1752bp|location=Sequence derived from alignment at H-paniculata_contig14564:4950..5825+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |