|
Homology
BLAST of mRNA_H-paniculata_contig1456.2731.1 vs. uniprot
Match: D7FZ71_ECTSI (AP2/ERF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ71_ECTSI) HSP 1 Score: 157 bits (397), Expect = 8.100e-39 Identity = 80/90 (88.89%), Postives = 83/90 (92.22%), Query Frame = 1
Query: 7 GDES-SPPAAPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKSMTNFNTEAEADRLMASEE 273
GDES P PRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKSMTNF TEAEADR++A +E
Sbjct: 121 GDESLEAPVTPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKSMTNFATEAEADRVIAEQE 210
BLAST of mRNA_H-paniculata_contig1456.2731.1 vs. uniprot
Match: A0A6H5LCQ5_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCQ5_9PHAE) HSP 1 Score: 157 bits (397), Expect = 1.400e-38 Identity = 80/90 (88.89%), Postives = 83/90 (92.22%), Query Frame = 1
Query: 7 GDES-SPPAAPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKSMTNFNTEAEADRLMASEE 273
GDES P PRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKSMTNF TEAEADR++A +E
Sbjct: 108 GDESLEAPVTPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKSMTNFATEAEADRVIAEQE 197
BLAST of mRNA_H-paniculata_contig1456.2731.1 vs. uniprot
Match: A0A6H5JUY3_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUY3_9PHAE) HSP 1 Score: 127 bits (319), Expect = 8.570e-29 Identity = 61/83 (73.49%), Postives = 73/83 (87.95%), Query Frame = 1
Query: 40 RRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKSMTNFNTEAEADRLMASEEHQKLL 288
RRRGR+G+S+YRGVCVTREGKWRAVIYKERKQLYLGVYESE++AAKAHDRAARFHF D ++ NF++E EADR + ++LL
Sbjct: 97 RRRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFADSAVCNFDSEHEADRQAVIHKQRQLL 179
BLAST of mRNA_H-paniculata_contig1456.2731.1 vs. uniprot
Match: A0A836CI56_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI56_9STRA) HSP 1 Score: 115 bits (288), Expect = 6.920e-27 Identity = 54/64 (84.38%), Postives = 61/64 (95.31%), Query Frame = 1
Query: 40 RRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKSMTNF 231
RRRGRKG+SIYRGVCVTREGKWRAVIYKERKQLYLGV+ESE++AAKAHDRAAR+HF ++M NF
Sbjct: 21 RRRGRKGKSIYRGVCVTREGKWRAVIYKERKQLYLGVFESEIDAAKAHDRAARYHFGAQAMVNF 84
BLAST of mRNA_H-paniculata_contig1456.2731.1 vs. uniprot
Match: A0A836CH07_9STRA (AP2/ERF domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH07_9STRA) HSP 1 Score: 100 bits (248), Expect = 6.280e-23 Identity = 46/54 (85.19%), Postives = 51/54 (94.44%), Query Frame = 1
Query: 70 YRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKSMTNF 231
YRGVCVTREGKWRAVIYKERKQLYLGV+ESE++AAKAHDRAAR HF D++M NF
Sbjct: 1 YRGVCVTREGKWRAVIYKERKQLYLGVFESEVDAAKAHDRAARQHFGDQAMVNF 54
BLAST of mRNA_H-paniculata_contig1456.2731.1 vs. uniprot
Match: A0A6V1UZI2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UZI2_HETAK) HSP 1 Score: 83.2 bits (204), Expect = 1.550e-14 Identity = 42/77 (54.55%), Postives = 55/77 (71.43%), Query Frame = 1
Query: 1 GSGDESSPPAAPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKSMTNF 231
G D + P RRG +G+S ++GVCVTR GKWR+VIY RKQLYLGV+E+E EAAKA+D +A +F D ++ NF
Sbjct: 129 GKSDSNRPRVQSAGRRGPRGQSQFKGVCVTRAGKWRSVIYVGRKQLYLGVFETEQEAAKAYDNSAVKYFGDGAVLNF 205
BLAST of mRNA_H-paniculata_contig1456.2731.1 vs. uniprot
Match: A0A7S3Y6J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6J2_HETAK) HSP 1 Score: 83.2 bits (204), Expect = 1.880e-14 Identity = 42/77 (54.55%), Postives = 55/77 (71.43%), Query Frame = 1
Query: 1 GSGDESSPPAAPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKSMTNF 231
G D + P RRG +G+S ++GVCVTR GKWR+VIY RKQLYLGV+E+E EAAKA+D +A +F D ++ NF
Sbjct: 142 GKSDSNRPRVQSAGRRGPRGQSQFKGVCVTRAGKWRSVIYVGRKQLYLGVFETEQEAAKAYDNSAVKYFGDGAVLNF 218
BLAST of mRNA_H-paniculata_contig1456.2731.1 vs. uniprot
Match: A0A835ZDL0_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDL0_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 1.180e-13 Identity = 47/84 (55.95%), Postives = 55/84 (65.48%), Query Frame = 1
Query: 13 ESSPPAA-----PRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKSMTNFNTEAEA 249
E SP AA R RRGRKG+SIYRGV TREGK+RAV+Y ERKQ+YLGVY E+ AA+AHD+ H + NF E A
Sbjct: 110 EPSPSAALRDANNRPRRGRKGKSIYRGVSHTREGKYRAVLYVERKQIYLGVYNDEVSAARAHDKGVLAHGLGHAYLNFKLEEAA 193
BLAST of mRNA_H-paniculata_contig1456.2731.1 vs. uniprot
Match: A0A6H5KQM0_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM0_9PHAE) HSP 1 Score: 82.0 bits (201), Expect = 2.460e-13 Identity = 42/77 (54.55%), Postives = 54/77 (70.13%), Query Frame = 1
Query: 16 SSPPAAPRR-----RRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKSMTNF 231
S PP P R RRG +G+S ++GVC+TR GKWRAVIY RKQ YLGV++SE +AA+A+D AA HF + + NF
Sbjct: 385 SGPPVTPVRVQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNF 461
BLAST of mRNA_H-paniculata_contig1456.2731.1 vs. uniprot
Match: A0A835Z3I9_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3I9_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 9.920e-13 Identity = 40/69 (57.97%), Postives = 51/69 (73.91%), Query Frame = 1
Query: 1 GSGDESSPPAAPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHF 207
GSG P A RRG +G+S ++GVC+TR GKWRAVIY RKQ YLGVY+SEL+AA+A++ +A HF
Sbjct: 217 GSGGGGVPVAQASGRRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVYDSELQAARAYNDSALEHF 285
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 79.0 |
Seed ortholog evalue | 5.4e-12 |
Seed eggNOG ortholog | 2880.D8LFR4 |
Preferred name | AP2 |
KEGG ko | ko:K09284 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000003,GO:0003002,GO:0003006,GO:0003674,GO:0003700,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006355,GO:0007275,GO:0007389,GO:0008150,GO:0009653,GO:0009791,GO:0009888,GO:0009889,GO:0009908,GO:0010073,GO:0010093,GO:0010154,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0022414,GO:0031323,GO:0031326,GO:0032501,GO:0032502,GO:0035670,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0048316,GO:0048367,GO:0048437,GO:0048438,GO:0048440,GO:0048444,GO:0048449,GO:0048467,GO:0048481,GO:0048507,GO:0048608,GO:0048646,GO:0048731,GO:0048827,GO:0048856,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0061458,GO:0065007,GO:0080090,GO:0090567,GO:0090696,GO:0090697,GO:0090698,GO:0090701,GO:0099402,GO:0140110,GO:1903506,GO:1905392,GO:1905393,GO:2000112,GO:2001141 |
EggNOG free text desc. | specification of floral organ identity |
EggNOG OGs | 28UNB@1,2QQXB@2759 |
COG Functional cat. | K |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko03000 |
Exons | 7 |
Model size | 1122 |
Cds size | 1119 |
Stop | 0 |
Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1456.2731.1 >prot_H-paniculata_contig1456.2731.1 ID=prot_H-paniculata_contig1456.2731.1|Name=mRNA_H-paniculata_contig1456.2731.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=373bp
GSGDESSPPAAPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGV YESELEAAKAHDRAARFHFPDKSMTNFNTEAEADRLMASEEHQKLLQMEV ERDLAPLRRLGTTPASRGAAGSSGPVSPGGRLPSAGRGRGGGGRIRRGVG TDGISQNFHQWEFDGHGGEFPRMNTAAGGEASQRRSDVYDHKMSASHFYG ADGGVVGTGGRGGGGGGGGARRPTWRNDQNGGRAGTAAGGYDMFQGHEDD DEDDEVGGLVDGRATHAILHRETQVQGWGSRELGAGPPTTGSGLSSSTVD GGRGSAGDPRPGRHAANTYATARGGGRRGGTLMGGPWGARFVEGDDPDGF GAWGAGRGRGDGDGSRGGQWQTP back to topmRNA from alignment at H-paniculata_contig1456:6911..18713- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1456.2731.1 ID=mRNA_H-paniculata_contig1456.2731.1|Name=mRNA_H-paniculata_contig1456.2731.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11803bp|location=Sequence derived from alignment at H-paniculata_contig1456:6911..18713- (Halopteris paniculata Hal_grac_a_UBK monoicous) GGGTCGGGTGATGAGTCTTCGCCGCCGGCTGCGCCGAGGCGGCGACGGGG
GCGGAAGGGGAGATCGATATACAGAGGCGTTTGTGTCACGCGGGAGGGGA
AGTGGCGCGCGGTTATCTACAAGGAACGCAAGCAGGTGTGTGTCTCTCTC
TGTGTGTGTGTGTGTGTTGAGGGTGAGCGTGAACAGAAGCAATTGAAAGT
GATGTCGTGATTGACGGTATGTATCATGCACAGGCAGTCAGGCGAAGAAT
ATGGCGAACGTTTTGTAGGTAAGTCGCGGTGGAAGGGATTGTATAGGTAC
ATGGAGATATAGAACTGTGTCCCCGGTGCCGGTGTATTGTACTGAAGCGC
ATCTTGTGTGAAACTGTTCTGAAAAGAATACACTGTCGTAGCGAAAGCAC
CTGGGTATAGCTCACCACCCCATCGCGAAGTACTAGTAAATTACCTAGAG
AAATGTTGGAAATTAGTCATTACATCACCGTATGAAATCGAAAAATCCTT
TTTACGTACGTTGCCCGCGTTGTCATTGTTATACTATGAACAGGATAACT
TTGTGTTGAAAAAGGCGAGCGGGGGTTGACACCAACTACCTATATGCCAT
TGACCATATACCGTATTTTACCGTCGCGGACCCTGGAGGCATTCTCCACA
ACCAGAACTACGGTACCTCCGCCTATGATTCCAACCAACAGCGAAGACAA
AGAATTGATTCTTCATCTTGCCACTGAATTCACCGCAGACGTGTTGCAAA
TTACAGGTTACACCCGTATGCGTATCTCGATTATGAATTTATTTGCTGCG
TAACCAAATGATGGGCCTCGGTCTTGACGAGCATGTGGTACTGGGGCCGT
GCGGCACCCGTACTTAAAGCGGTGAAATTTGGAAGCTCTTCACATCCATA
GGTTGTGGGTTCAACTCTCACAAGGGCTCTCTTTTTTGTTCTCTTTTCTG
AAGAAATATTCGGAAAAAAGGATGCACGTGGTAGCAGTGCCTACGGAGGG
GAAAAGAAAAATCGTCAAAGAAATATCTTAGGGTTAGGGTTTGGGACACA
GAAATACAAATGTTGATACTTTGGACGTTTACGACGAAAATTTGTAAAAC
AAAACAAAACAAAAAAGCGTTTGCCGGAACGTTCAGCATGAGCACGTTAA
TTTTATATGCCCTGGACCACTACCCCACGACTACACTCCGATTGGTGATA
TAACACGAATTAACAGGCGGTGTCATCCGTTTATGTCTATGTGCTTGCAT
AATGGGAACGTTTTGGGCAACTACTCTTTTTACGCACGTTCAACTTTGTT
TTGCGAATATTCGACGCATTCGTATTCCTCCGTGGTGTGCAGTTTTTACT
TTTTATAGATGCTGCCGTCAACGGCAACGTTGGTGAGCGGCGGGGTGGGA
TTGCTGCCTCTCTAGAGACGGACCGAAGATTACTACTTGCAGCCATCGGA
CCGATGGGTCCCGATCAACTAGTTACGCGCTCATTCACCATTTAAAGCGA
TGTAGCATATACCGTAAGATCGGTTAAACGGAGTATGAGCATAGGTTCGG
CGACGGGAGCGTCCTCGGTATTCGGTGACTAACAAGTATTTTTCATGGCT
TTTCACAGTAGTGGAGGCATTATTACCCATGTGTTTTTTCATATGACTAT
GGTAGTTATGTTAAAGGTGTACTTCTACTGCCCTCGTAGGACCCGGGGTG
TGTGAGTCCGAGGAAAATGAGAAGAGGAGTTGGGTGGAGTTGTGGACAAC
AATGGGGGTAGTCAACCATTTTCACAATAGATGACTGGTTTATTAGTCAG
GGCTTATCATGGGACCACTGGACGAGACAAGATCACATGTTGAACACACG
TTTTGACGGCACGGGAGGGCGCGGGACTTCACCAGAGCTAGGCTTTAATT
CATGTACGTTGTATAGGTCCCGTGACTGACGGGACGAGACAAGATGGGAC
GGGATAGTATCCGGTTCCGTCCCGTCCTTGAAAAGCGACGGGATAGGATG
GAGAACCCAGTGCCGTCCTCTAAATATCCGACTGAGCGGAATTACCGTCC
AGTTCCATCCGGTGCCGTGAGGGTCCCGTGTTCCCGTGATAGGACTTGGT
TTGGTGGTGGTGGTGGTGGTGGCGGCATATTCTTGGGTAACAGGTTTCCA
TTCTTTACCCAAGTATAATTCTTCTTGTCGCCTAACTCTGGAACCAGGGC
TATGACTATTAATGAGTGTAGTATGACGATACACCAAAAAGATCTGAATA
CAGGGGAGTATGGTATGTGGTCTGTTCCGAAAATGACCACGTCTAACACC
ACCATCATCGTCACCACCATCACATCATCAAGTCCGACCCTAGCGAGCCC
TGTCAATCGTGGTGAGTCGGCCTTGCGTCGGTCACACACAAATCGCCGAT
TGTTTGTAATGCACTGTGCAGTATAGTATGGTGAATATCCGCAGAACACT
TAATTGTTATCGTACCGGGTGCGTGCGTGAATCAAACCCAATCCTCTCGA
GAACAGAGACGTCATGCGCGAAAGCGCCCGTCAATTGACAGAGAGATCTC
CTCAGGCAAAATATGTCCAACGGCACGCCTTTGCCCCCCCGCTCTGTCCT
CTCGAGTACACGAGGTTTACGGCCTAACAACTAGGGCATGGCAAAAATGG
TTTCGCTCCTGTAATGATGTCGGGTGTTTTTTGTGGGATTTTTCAGTCGT
TCAGCAGTATTACCCTAACTGTAATCATGCTTCGAATTTTAGTTAATTCT
GCCGTTGGCACATTTATTCGCTGTTTATTTTGTATATGTACATGTTGTAC
ATGCCTTGAACCGTATTCCAACATGTTGTACATGCTTGTGCTGTCCCCTG
TCATGGACTGCGACTCCCTTACTTGATAAATGGTAGTATATTGTTGTTTC
AAGTGTACACAGCTGAGATTTTAGGGTTAGCCGCATCACTTTTTTTTTTT
TTAACCCCCGGAAGGCTAAGGCAAAAACCTTTATCCGATGCTTCCATACA
GCTGCATCACTTTAACAGGGGTACGACCTCCACCGCCCTCTCCCCCCCAA
AAGAAATGAAGAGTATGACTAGTAGAAAATTGAACTGTATCTACAGTCTA
ACCCGCTTCACCCCTCCCCGACCTCTCTTCGTCTTTTTTTTTCCCATGTG
TTACTGAAAAAGCTCTATCTGGGAGTGTATGAGTCTGAGCTGGAGGCTGC
TAAAGCCCACGACCGTGCTGCGCGCTTTCACTTTCCTGACAAGTCCATGA
CCAACTTCAACACGGAGGCCGAGGCTGACCGTCTCATGGCGAGCGAGGAG
GTGTGTGAGGTGCTTTGAATTACCCCCCTTTTAAAGCGGTCGTCATCGAG
GCGATATCAGATTTTTTCGCATTGGCTGAACTATTTTATTTGCACCGAAG
AAAAATATCACACCTTTTCAGTCAGGTAATTCTGTGATTTTTTATGTTGT
TAGAATGAGAAGATTTTGCGATTTTTTTATTGGGTAGCTCGTGTTTTTTT
CGCATTTCTTATGTACACTCTCGCATTGAAAATCGAGGTACCTACGCACT
GCACCCTCTTTTCGTGCACACCAGAGTCCCCACCTATCTTATTTTCGGAC
TAAGCACCAGTGTTCATGGAAGCTTTTGGGGTATATTGTTTTCCATGCAA
ATAGGCGTTACATGCTGGGAAATATAGCTTGACAGGAATTTTGTACAGGC
GAAAGAAATCTTCGTTCGTGGGCAATCGAGAACCAATACTCTGGATAATT
CGTGGCGTCTCCGTAGTAAAAACGGATTCTGCGTCGTAACGCATACAACA
GGGTTGTTCCGCATGATCGATTATCTGCATAGACATTCGCACCGCTCCGC
AGCAGCAGCAGCAGCAGCCAGTGCGAAACACCACGATGGTGAATGACCAT
GATAGCGACGTGTACATACGGTGGGTTAATTACTTCGATTTAAGGTGGTC
AAAGTTGACGCGGAACGAGCGTTTAATGCTGGTTGTATCGGCTTTGTCAC
CAAATCATAATCCGATCATTTCCTATATTATACGGTAATTTTAATTATGC
GGATTTCGATGTTTAAGGCGGGCCTTCTTGTCGTGTCGTGTCGTGTCGTG
TCGTGTCACCACCCCTCCCCGCTATTTTCTTTTTTTTTTCCTTGCGCGCA
GCACCAAAAGCTTCTCCAGATGGAGGTGGAGCGGGACCTAGCGCCGTTGC
GGCGGTTGGGGACGACACCCGCGAGTCGAGGAGCAGCGGGAAGCTCGGGG
CCTGTATCTCCCGGCGGTCGTTTGCCAAGTGCAGGTACACTGGTGTGGTT
TACAGCGGAAAAGGAACAAGTGGCGGTAAAAATCATTTCTGTAGAGAGCT
ATGTGCAGTAGCTATACCTGTGCATGTATACTCACGTCACATTGATCAGA
TTACGCAGCGAAGCCTATATCTCGACGCTGAGACCATGGGGATTATTATT
GTCTCTTAACCAAGTCTATACGATAATTAATATGGGGGAAAAAGGAAGTG
TGATGGAGAACTCAGATGATTGGTTTGTTCGTGAATATGGGATCGCAATG
AGGTTGACCTTTTGACTTTTCTCAACAATCTAGTTACTATCCCTAAGCCT
ATTTGGGTCGTAGTTTCAATTCTTGGGACACACATTTTTTCCCTCTAACT
TGGGAAATGAGAAGGATACTCGTTGTATATTTTGTGTATATAGTCCATCT
GTCCCATAAGTCTGCGACGTTAAGGGTGTAACTTGTTGCAACGACCTCAG
AATCAAAAATAGATTTTTGAGTCGGATTCCTTGGTGTTTTTCACTTTGAT
TTTATACTTCGCAGCTTTCCTCGTTCCCATCAATCCACCATTCTACCGCC
GCGCCGCGTCAAAAGCCTCTCGGTCGATTTTGACCGAATTTGGCGCACTT
CCCGCACGCTGCCTTTTCTTGGATTGGTGTGCTGTACCTCGAATTCGTTA
CCTCCTGGCGACCTCAAGACCTGATTGTACCGCTTAAAGAGGCTCTGTCA
AGCCCTCTCTTAAGGTTGCCGCGTCGTACGCATCGTACATGCTCTTCACC
CCCTCCACAAGGCCGTCTATCGTACCGTAAGGCTCCTTCCAAACCTTACT
TTTCAGAGATGCAAAGAACCCCAAATCGTTGATACTGAGATCTGGTGGCT
GCGCAGACTGAGTTACGAGATTGACATTCCATCCCCCGTCCCTCCCGAGT
TCGTTGAGCTTCCACGGCGTGTCTTTCCCCTTTTGGGGGTCGCTCCGCCC
TGCTGCGCGACCACTTCCTCACCCTCCAACCATGGCATCTTTTCCCTCAA
TGCTGGGAGAAAATGAGTCCTTGTACCACTCCTGGTACCACTCCTGGTAC
CACTCCTGGTACCACCCGGCGTCAATGGCCACGTCGAACTCATTATTACT
GCCCCCGTTCACGCAGGGCCAAATTCCTCTTCGCCTGCTTGATGATACAT
ACACGCCAGATTTCAATCTTGCCGTCGAAATCGCGGGAAGGATCTGGACG
CGAAACGGCCCAGATAAACATCACCTTACGAATGTATGTGACTTGTGCTG
TACTTTGGCGGACCCCACCCTTTCCTCTCCGGGGAATATGCCGACGCGAT
CCCTGTCGCGAATTAGGTAAAACCACGCTTCGTCGACGTGAGTTGTTTGG
AATCCGCTCCTGAAAGTGATACGGCCCAGGATGAAGTCTACCCGATTCTT
TCTGTGCGTCAGTGACAGAGATGGCACAATGCGCCGTTTTACTCTCGCGG
CGCTCATTTATTTGAACCATCGCTTAAGCTTTGAGCTACCGGCTAGGAGA
CCAACTTCGGCTAGCTTGGCAGACAGTTAATCGAGGGTCAGGGTTCGACC
TCGGCGAAAGGGTGTTGCGATGGTCCAGTTGTTCTCCTACACGCGCTCAA
AGTTGTCTGGGATATTGGTCGCCAACTCCAAATTTCTCCGCCAACTCTGG
CCCAACGCCTTTCGGAAGCCGTTTATTAGTGCGAGGTGGCGCTGAAGCGT
ACGCCACGGCCAACGAGGTTCGACCTTCCTCGCTCAGCTCGCAATTTTTG
CCCCAGGCTGATGGGCTCTCGGCAAAAGATGCCGGACTCGCCGGAGTGGT
AATGTGGGTTTCGAAACTCGCCCCGCAGACGGTCTAGAGATTGCATGAGA
GTCGTACAGCTCTTGGCGAGGTGCTGAGATTTTTGTAACGATAGGGGGGG
CGCTTTATCCGCCGCGGGGCGCAGCGCAGCGCAGGCACTCAAAATGGAGC
TGAAAAGGGCCGTTTTTTTTAGTTCCCTTTCTCGCGGAAATTTCGGAACT
ATTTTGGAACACTACGTGAGAAAAAATATTTCTTCTTAAAGTTTACGTCC
GTAGGTTCAACTCAAGCCATACATGACCGAAAAACTCTTTGTATTCATAG
AGAAACGGCCTACACAAGAACTGACGAATCGTAACGTCTCAAACTTATGG
GACGGAGGGAGTATATATATATACACCGCCGGTAATTTCCCTGTTGACGA
ACAAGAGGGATTGTAACACCTGCGGCGCAATAATACAAGGCAGGAGCCAA
GGCATTACACTGCACGTTTCCAGCCTTGTGACCAGTGGGTCTCCCTCATT
GACCAAATAAAGGAACTAGAAATATGAAAGCGCTTAATTGGAAGACCGAT
GGGATGAAAAAAAAGAAAAAAAAAAGAACTGCATGCAAATACTCCAGCCC
CGGAACGAACGAGTACACCAGTGCATTGTTACGAGTACCGTTTTTTCTTC
AAAATGAAAAAAATATTCATGCCCTACAGATGAGTACTTCATTCACAGGC
GCCACTGACAGAAGGAAAGGTCAGGCATGTTGTACAATCAATATGCCCCG
AACTCCGGAACAATTCAAGAGTGCATGCATAACTGGGGACTCCGACAGAA
TATGTCATCTGTATGTCGCAGCTACAGGTGATACCAGTCTATCTGCTCCG
AACCACCGAACAACGAAAGCGAGTACTGTACTCGTGGAGCCCCTCAGAAC
TCAGGTGCAGTAATAATGCCTCGTAACTCGAAAGTGCGGAAACAACCATG
TGTCACTTTCCCCAGTACAACGCGTGTTGGAACTGCACAAAAAACGTTCT
CAAGGAAGTATTAATAGCCAACCATGACGTGCAAACTACATGCATTTTCC
CGAACAAAATGTACGTTGGAGCTGCAAACATGCGCAAACTAGATTGATTC
ATCTGAATCTTAAGACGACGTTTTTATTTTTTTTGTGTGTGGTTCCAAAA
TGCGTTTTACTAGGAAAATGAATATAGGTTTTTCACGTGGTTGTTTCCGC
AGTTCCGAGTTACGTAAAAATCGATGTCCCCGAGCTCTGGAAGACTTGAC
GGGGTACAGTACTCGCTTTAGTTGTTCGGTGCAGATAGGCTGTGGTTATC
GACTTTAGCCGCCGGTGGGAGGAGGGAAAATGAAGTGGTGTTCTTGTGAC
TGTCAGCGAAGTTACAACATACAGGAGAAAGGTTTTGCCCGAGTCCCCAG
TTATGTAATGGCATATTGAGTATAGTGTTCTCTTTGGTTGTTCCGGAGCC
CGGGGCACGGAATATACTACATGCTTGGCTTTTCCTTCCGTCTATGGTCC
GTGAAGGTAGCGTATACATACATTGCGTTTCCGATGGTCTGGCGCAGACG
AAGGAAATGTTTTACTCTTGTTTTCGAAAATATTCGTCTGACAGTTCGTG
TTCCTCAGCAGTATGCATGCGGTAGTCATGTCAATCCCAGGGATTTTGTC
AACGACCCCAGAAATTCGAGGAATAAGATGAAGTAAAAAAATCGTGCTGA
AAAATGAAAAAGTTCAAGTTCGGGGAAGTTTGGAGGTTTTCGTTGGGCCG
CTATTGCAGGACACCTCCACGCTGAAAAAGAGAAGAGTTTTTATAGGCCC
TGCAGCCTATCTCGGAGAATCATTAATCTGCCTTTCTTACGTGTCAGTGA
CTCTCTTAAGAACCTATGACCTCCTGTTCATGTGCCTCGATGACCTTTTT
TTTTTGACTGTTGCGAAGGAAGAGTGGGTATTTCGCCTGTTGTCGTTTTT
TACTAGTCCAAAATAGAAATCCCCAAACGGCGAAATACGAACCCTCTCTG
AATACGGGGTACAAGCACCTGCAACATCACCATGTTGATGAATTAGATAA
TCATTCACTCGCTGGAGTACGACTTTTGAAGCAAGTTGGTGGCATTTAAG
GCACGCCTGATACTTGTCAACGCTACTTTTGGTGTCACCAAAATCAGTGT
TTTCAATGTGTTATGACGCTTTTGTTTCGTTGGTTGTTGTCGCTGCGTCT
CATTACTTGGCTATATTGACCATTTCATTCTGGAGGAAGGTGACTGCCCT
GCAGCACATAACTGCAATCGCCCGTCTTTGGTACACGGCAAGCGCTTTAA
GAGGAACGCCTATTTGATGTTAGCCGCCCACGGCTCATACTTACGTACAG
CCTCATCCGAAATAGAACGGTGTTTATTGAATTCATCACTATTTGCTGTG
GTATGTGGAGCAATTAGTATAGGGCCACAATTTGATCGCGTTTGTGGAGA
ATATTTCTCTTCCGCAAGTAAAAAATATAAACGAACCTGATTTTTTTTTC
TTACATCCAATTGCCTAACTTGTGTTCGCGTACTCTAATGTGACGACGTA
TACAAATATCCAGGTCGGGGTAGAGGCGGTGGCGGGAGGATACGGCGGGG
GGTAGGGACCGACGGCATTTCGCAGAATTTCCATCAGTGGGAATTCGATG
GACACGGCGGGGAATTTCCAAGGTGAGCGGCACCTGACGTTAGTTTAGCT
GTAAATACCCTTGGCCATGGGAAATCCATGTGATTTCTCCGGCCACCCTG
AAGATCTGAGCGTTCAGTAACCTGTCAGCGGGGTCTGTGACCCCTGTTAT
CATTTGTTTGTGCAGTGTTTGTTTGATTTTGCCGATTTTAGACACTCTTG
CCCTACACTAAATCCAAGAGAAACGGCTCCAAAGGCGAGAAAACGATCCC
CCTCTTGCGCCTGAGATACGCTGTTTAACCAGCTGTCTACAGCTGCTGAT
GATGGAGCATGTTCTGGTAGGCGTATTCGTATCTTCGTCATTATTCACGA
AATGGTAAGAAATATATATTTTGATCCTGCTCCCAAATGATAGAATAGTA
CATGAAAGGTACAGTACCTATTGTAGTCTACTACAGTGATTACTCCGTTT
TGAGGCTAAATCGATGGGTGGCACGGCGAAAGTCTTCTACTCCATGAGCA
ACATAAGAACGTTAACATTTTGACCTTTCTGTTTCGGATGCTTTTTCATC
CAAACTTTATTTTTGGTGTTTGTGAAATTATCACTGCATCATGTTTTATC
CACCTGCCAGTAGCAGTATGTAGATGCGGATCTGATGCGGTCGTAGTGGT
GGGGAAGCAAGCGCTTGTTCACGCACAGCTATCGTCGTGATTTGTAACTC
CAATATTTCAGAATAGGGGTTGCAAGATCCCAGGGCTCCCCCCTATTGAT
CTCATTTTTCTGAGAAGTGAAATTTTACAGTTATTTAGCAACAAAACCTC
AACATGGGTACGGCGAAGCTATTACACAAGCGTTATGATGCTTCCTTCCA
CTCCCCCTCGGCCCACCTGTCCGCCCGCCCACCAGCCGGCCCACCCGCCC
CTCCACTACCATGTTTTTGGATGTTTTGTGCCAATTTTCAACGTAATTTT
GTTTTCGTCAGCATCGAGAAGACTTGTTTTTCACCCTCATCTGTTTTCTC
TTGTTGCCATGGTATGTTACGACGTTTTTATTTTATTTTATTTTATTTTA
TTATATTTTAGTGTACGAGTGTATGTAGTAATTGTTTATTGAGTATATAA
TATTTTACAACTTTTTGCTTGACATTCAATACTAGTTGTGGAGTCACGGC
CACACCCGGGTTCAGCTTTTGACCCATAGACTTGCTGCGCTCGCCAGCGA
CTCTCTGCACTCGCAAGAAAATTCGATGTTATCTTGAGTGCAAACACGAA
ACGCTGTTCCAAAACGACGTCGATGACCGCGACCCGACCATAGCATGTAA
TAAATTATGAGGACTTGTGTCCGTTTTGTGCGGTGTAAACGACAAGAAGT
TGTACCGGTTTTATGCGCACGTGCAGAATGAACACAGCGGCGGGTGGTGA
AGCTTCTCAGAGGCGTTCGGACGTTTACGATCACAAGATGTCAGCCTCAC
ACTTTTACGGCGCAGATGGGGGCGTCGTCGGAACAGGCGGGCGGGGCGGC
GGCGGTGGCGGTGGCGGAGCGCGCAGGTCTGTATTACATTCATACACACA
TACAGGCGGAGGGGCGGGCAGAAACAGGAAGACAGGCAGGCAGGGGCGTA
GACATACAGCTAGACAGTAGCAAGTTTGACGAATAGCACAAGGAGTTTTT
TTCGTGTGTTCAACTAGAATGTATGTATGTACTAGTATGTATGTGTGTAT
TTACTCTTGATAGTCGAGGCACGGCTACGCCCGTGCAATCCGCGTTTTGT
CTGCAACCAGCCCACAATAGACTCCCTGAACCCTCGCGAGTATGCGTGCC
CATTGTGCATGATGATTCTTATCTCAGGAGTTACTTGAGTGCAAAACTGG
AAAGATCTTTTCGAAAAGGCGACCGTTACGCCAGTGTCCTCAAGTTGATC
GATACGTTAAGGTGACTATGACGATGATAATGATGACGTGCCTCCCGGAC
AAGTTTTCTATTTTCTATTGACATGATTTTTTTTTAAGCGTCACGCGCCA
CCGACCAACAGCTATGGCGTGGCTACTAGTAGCATTCAGTAATTGGGAAT
CACTTCACTTAATTCATTCGTTCATTTCAAGACTTTGACTAACACAGCAC
GCGAGAGATCTGGTCCGATACCCGGTTTGTCGATTGACTCGGTTCCCGCC
ATGCACAGACCCACCTGGCGCAACGATCAAAACGGAGGCAGAGCCGGTAC
TGCTGCTGGAGGGTATGATATGTTTCAGGGGCACGAGGATGATGATGAGG
ATGATGAAGTTGGTGGATTGGTCGACGGACGAGCCACACATGCCATACTA
CATAGGGAGGTAAAGAGGATTTCGTAAGCTGTAAGACTGGTTGAGGCGTG
GCAATACTTCAATACATCCATAGGTTAGAATCATACCGCTGTATTCGGTG
GCAGCCCCCCGCATTCCATTTGACGCACATTCAACATGCCAGTAGTCTAC
GACTAGTATCTCCCTTTCTGCTTTTGCATTCCCCCGCCGCCATTTACAAG
CCTGCGGTGTGCTTTCAACACGGAATGATTCATCTGCCATGGGATTCTTT
CCAGACGTTTGTGTAGAGCTGTAACGGTTTACATCATGGTTGTTTTCCTT
CATGTTTTTTAATAGATCACGTGTGAATCTTCCTCTTGCAGTAGTAAAGA
TCCGTCTGGACTTGACAATACGTTTTCTAGGAGTTAAATCGAACGGTGCA
TGATATGCCTATTTGTTTTTCCCGAAAAAATGAAAATCCGACCGTGAAGA
CACAGGTACAAGGCTGGGGCAGCCGGGAGCTAGGAGCGGGACCGCCCACC
ACCGGTTCAGGCCTGTCATCCTCTACCGTTGACGGGGGAAGGGGTAGCGC
GGGTGACCCGCGACCCGGTAGGCACGCCGCTAATACGTATGCTACTGCGC
GGGGAGGCGGCAGGCGGGGCGGAACGTTGATGGGAGGCCCTTGGGGGGCG
CGGTTCGTCGAGGGCGATGACCCCGACGGCTTCGGTGCATGGGGAGCGGG
TCGGGGCCGGGGCGACGGGGATGGAAGCCGCGGTGGGCAGTGGCAGACTC
CCC back to topCoding sequence (CDS) from alignment at H-paniculata_contig1456:6911..18713- >mRNA_H-paniculata_contig1456.2731.1 ID=mRNA_H-paniculata_contig1456.2731.1|Name=mRNA_H-paniculata_contig1456.2731.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2238bp|location=Sequence derived from alignment at H-paniculata_contig1456:6911..18713- (Halopteris paniculata Hal_grac_a_UBK monoicous) GGGTCGGGTGATGAGTCTTCGCCGCCGGCTGCGCCGAGGCGGCGACGGGG GCGGAAGGGGAGATCGATATACAGAGGCGTTTGTGTCACGCGGGAGGGGA AGTGGCGCGCGGTTATCTACAAGGAACGCAAGCAGGGGTCGGGTGATGAG TCTTCGCCGCCGGCTGCGCCGAGGCGGCGACGGGGGCGGAAGGGGAGATC GATATACAGAGGCGTTTGTGTCACGCGGGAGGGGAAGTGGCGCGCGGTTA TCTACAAGGAACGCAAGCAGCTCTATCTGGGAGTGTATGAGTCTGAGCTG GAGGCTGCTAAAGCCCACGACCGTGCTGCGCGCTTTCACTTTCCTGACAA GTCCATGACCAACTTCAACACGGAGGCCGAGGCTGACCGTCTCATGGCGA GCGAGGAGCTCTATCTGGGAGTGTATGAGTCTGAGCTGGAGGCTGCTAAA GCCCACGACCGTGCTGCGCGCTTTCACTTTCCTGACAAGTCCATGACCAA CTTCAACACGGAGGCCGAGGCTGACCGTCTCATGGCGAGCGAGGAGCACC AAAAGCTTCTCCAGATGGAGGTGGAGCGGGACCTAGCGCCGTTGCGGCGG TTGGGGACGACACCCGCGAGTCGAGGAGCAGCGGGAAGCTCGGGGCCTGT ATCTCCCGGCGGTCGTTTGCCAAGTGCAGCACCAAAAGCTTCTCCAGATG GAGGTGGAGCGGGACCTAGCGCCGTTGCGGCGGTTGGGGACGACACCCGC GAGTCGAGGAGCAGCGGGAAGCTCGGGGCCTGTATCTCCCGGCGGTCGTT TGCCAAGTGCAGGTCGGGGTAGAGGCGGTGGCGGGAGGATACGGCGGGGG GTAGGGACCGACGGCATTTCGCAGAATTTCCATCAGTGGGAATTCGATGG ACACGGCGGGGAATTTCCAAGGTCGGGGTAGAGGCGGTGGCGGGAGGATA CGGCGGGGGGTAGGGACCGACGGCATTTCGCAGAATTTCCATCAGTGGGA ATTCGATGGACACGGCGGGGAATTTCCAAGAATGAACACAGCGGCGGGTG GTGAAGCTTCTCAGAGGCGTTCGGACGTTTACGATCACAAGATGTCAGCC TCACACTTTTACGGCGCAGATGGGGGCGTCGTCGGAACAGGCGGGCGGGG CGGCGGCGGTGGCGGTGGCGGAGCGCGCAGAATGAACACAGCGGCGGGTG GTGAAGCTTCTCAGAGGCGTTCGGACGTTTACGATCACAAGATGTCAGCC TCACACTTTTACGGCGCAGATGGGGGCGTCGTCGGAACAGGCGGGCGGGG CGGCGGCGGTGGCGGTGGCGGAGCGCGCAGACCCACCTGGCGCAACGATC AAAACGGAGGCAGAGCCGGTACTGCTGCTGGAGGGTATGATATGTTTCAG GGGCACGAGGATGATGATGAGGATGATGAAGTTGGTGGATTGGTCGACGG ACGAGCCACACATGCCATACTACATAGGGAGACCCACCTGGCGCAACGAT CAAAACGGAGGCAGAGCCGGTACTGCTGCTGGAGGGTATGATATGTTTCA GGGGCACGAGGATGATGATGAGGATGATGAAGTTGGTGGATTGGTCGACG GACGAGCCACACATGCCATACTACATAGGGAGACACAGGTACAAGGCTGG GGCAGCCGGGAGCTAGGAGCGGGACCGCCCACCACCGGTTCAGGCCTGTC ATCCTCTACCGTTGACGGGGGAAGGGGTAGCGCGGGTGACCCGCGACCCG GTAGGCACGCCGCTAATACGTATGCTACTGCGCGGGGAGGCGGCAGGCGG GGCGGAACGTTGATGGGAGGCCCTTGGGGGGCGCGGTTCGTCGAGGGCGA TGACCCCGACGGCTTCGGTGCATGGGGAGCGGGTCGGGGCCGGGGCGACG GGGATGGAAGCCGCGGTGGGCAGTGGCAGACTCCCACACAGGTACAAGGC TGGGGCAGCCGGGAGCTAGGAGCGGGACCGCCCACCACCGGTTCAGGCCT GTCATCCTCTACCGTTGACGGGGGAAGGGGTAGCGCGGGTGACCCGCGAC CCGGTAGGCACGCCGCTAATACGTATGCTACTGCGCGGGGAGGCGGCAGG CGGGGCGGAACGTTGATGGGAGGCCCTTGGGGGGCGCGGTTCGTCGAGGG CGATGACCCCGACGGCTTCGGTGCATGGGGAGCGGGTCGGGGCCGGGGCG ACGGGGATGGAAGCCGCGGTGGGCAGTGGCAGACTCCC back to top
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