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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1280 |
| Cds size | 1278 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1456.2730.1 >prot_H-paniculata_contig1456.2730.1 ID=prot_H-paniculata_contig1456.2730.1|Name=mRNA_H-paniculata_contig1456.2730.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=426bp
DGSEDFPTPGYGRYHVGSTMRARDGGGDEAWGRGVGEGLDTNEDTPDESN
GAENNERWQQAGRGSGGLLPGDDDGAVPGGRRGGANGRGRWRDSGYDTAG
GGYNDNAAVTDGAERRGGGRQGQGRAWNERGGGGGRDSGPEDGENAIGDF
YDVRPSFAQSQRGGGGGASTGNNGSGGLVDRSAEHSSGSWLPGPGASESY
FSNASSGSGRTGSGTSSGGGMMNVDTSRGLASITTAEEAFTTLGRPQQHH
SGSVNAPASASPATGLYGGGGGGTGGARDRNGWDAREWTELGAAAAAAAT
VARGEASMSTRGDGVDDRFSSRPYYAYYYGNVGSTAAAGGGVSGKGGYAT
ALPLPSGGDVVREHASGNGLELGHGVLGSGTRADDGGSSGRKSPGGFDPN
ASSSRIFNPGVDSPFQGADDDDGEGV back to topmRNA from alignment at H-paniculata_contig1456:5031..6731- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1456.2730.1 ID=mRNA_H-paniculata_contig1456.2730.1|Name=mRNA_H-paniculata_contig1456.2730.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1701bp|location=Sequence derived from alignment at H-paniculata_contig1456:5031..6731- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACGGGAGTGAAGACTTTCCTACCCCTGGCTATGGGAGGTGATGAAATTG
TCTGGAGAAGAATGGTTTTGCCACTTTCATCGATTCTTCACGGTTTCTGA
ACCTTCCTATATATTTGAGTATGCTGGCCATGGTCGGAGACCTAGTTGCT
CCTAGGAAAAAATTGAACCGTCTCGGCATTGCCTAAGTGATTCCTCCTCA
ACAGCCAACCCGCCGTACGTATCGTAAGTAGTTGCGTCTTGTCTCCTTGA
TGTGGGTATTACCACTATACCACTTTTCATCTGTGCTTTTGTGCTTACGG
AACTCGCTCCAGTAGCCATACGGTCGGTCACGCCAGGTATGCATAAGTTG
GAGCTTGTACTCTCATCCCTAACGCGAGTTGGTGAACATTTACACGTGCC
TCTACATATCCATGTCCCGCTGGTGTCCTGAATCCGTGTCTGGTACATTT
GAACTCCAGATATCACGTCGGGAGTACGATGAGAGCACGGGATGGCGGCG
GCGACGAGGCGTGGGGACGAGGCGTGGGAGAAGGCTTGGATACCAACGAA
GACACGCCAGATGAAAGCAACGGCGCAGAAAACAACGAGCGTTGGCAACA
GGCCGGGAGGGGGTCTGGAGGTCTTCTGCCTGGAGACGACGATGGCGCGG
TTCCCGGCGGCCGGAGGGGGGGTGCCAACGGCCGAGGACGCTGGAGAGAC
AGCGGGTACGATACCGCCGGTGGCGGGTACAACGACAACGCCGCGGTAAC
TGATGGCGCAGAGCGACGAGGCGGAGGGAGACAGGGCCAGGGCAGGGCTT
GGAACGAGCGTGGTGGCGGCGGTGGACGCGATAGTGGTCCAGAGGACGGG
GAAAACGCGATAGGAGATTTCTACGATGTGCGCCCGTCTTTCGCTCAGAG
CCAACGCGGCGGCGGTGGGGGCGCAAGTACGGGCAATAATGGCAGCGGTG
GTCTTGTCGACCGTTCCGCGGAGCATTCCTCGGGGTCGTGGCTGCCGGGA
CCTGGAGCATCTGAGAGTTATTTTTCGAACGCTTCTAGTGGTAGCGGACG
AACAGGCAGCGGCACGAGCAGCGGAGGTGGCATGATGAACGTAGATACGA
GCAGAGGTCTCGCCAGCATCACCACCGCCGAGGAAGCCTTCACTACTCTC
GGCCGACCGCAGCAGCATCACTCCGGTTCCGTCAACGCTCCAGCTTCGGC
GTCGCCGGCGACGGGTTTGTATGGCGGTGGCGGCGGCGGGACCGGTGGCG
CTCGCGACCGCAATGGATGGGATGCTCGTGAGTGGACGGAGCTAGGGGCG
GCTGCCGCTGCCGCCGCCACCGTGGCGCGTGGTGAGGCCTCGATGAGCAC
GAGAGGTGACGGCGTCGACGACAGGTTCTCCTCGCGTCCCTACTATGCCT
ACTATTACGGCAACGTGGGTTCGACAGCAGCGGCGGGCGGCGGTGTGAGT
GGGAAGGGAGGGTACGCGACCGCTCTTCCTTTGCCCAGCGGTGGTGATGT
CGTCCGTGAGCACGCAAGCGGGAATGGGTTGGAACTCGGCCACGGTGTTC
TCGGTAGCGGCACGCGAGCAGACGATGGTGGGAGCAGCGGACGGAAATCT
CCGGGCGGTTTCGACCCTAACGCCTCGTCTTCCCGCATTTTCAACCCAGG
CGTCGACAGTCCATTTCAAGGTGCAGATGACGATGATGGAGAGGGAGTGG
G back to topCoding sequence (CDS) from alignment at H-paniculata_contig1456:5031..6731- >mRNA_H-paniculata_contig1456.2730.1 ID=mRNA_H-paniculata_contig1456.2730.1|Name=mRNA_H-paniculata_contig1456.2730.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2556bp|location=Sequence derived from alignment at H-paniculata_contig1456:5031..6731- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACGGGAGTGAAGACTTTCCTACCCCTGGCTATGGGAGGACGGGAGTGAA
GACTTTCCTACCCCTGGCTATGGGAGATATCACGTCGGGAGTACGATGAG
AGCACGGGATGGCGGCGGCGACGAGGCGTGGGGACGAGGCGTGGGAGAAG
GCTTGGATACCAACGAAGACACGCCAGATGAAAGCAACGGCGCAGAAAAC
AACGAGCGTTGGCAACAGGCCGGGAGGGGGTCTGGAGGTCTTCTGCCTGG
AGACGACGATGGCGCGGTTCCCGGCGGCCGGAGGGGGGGTGCCAACGGCC
GAGGACGCTGGAGAGACAGCGGGTACGATACCGCCGGTGGCGGGTACAAC
GACAACGCCGCGGTAACTGATGGCGCAGAGCGACGAGGCGGAGGGAGACA
GGGCCAGGGCAGGGCTTGGAACGAGCGTGGTGGCGGCGGTGGACGCGATA
GTGGTCCAGAGGACGGGGAAAACGCGATAGGAGATTTCTACGATGTGCGC
CCGTCTTTCGCTCAGAGCCAACGCGGCGGCGGTGGGGGCGCAAGTACGGG
CAATAATGGCAGCGGTGGTCTTGTCGACCGTTCCGCGGAGCATTCCTCGG
GGTCGTGGCTGCCGGGACCTGGAGCATCTGAGAGTTATTTTTCGAACGCT
TCTAGTGGTAGCGGACGAACAGGCAGCGGCACGAGCAGCGGAGGTGGCAT
GATGAACGTAGATACGAGCAGAGGTCTCGCCAGCATCACCACCGCCGAGG
AAGCCTTCACTACTCTCGGCCGACCGCAGCAGCATCACTCCGGTTCCGTC
AACGCTCCAGCTTCGGCGTCGCCGGCGACGGGTTTGTATGGCGGTGGCGG
CGGCGGGACCGGTGGCGCTCGCGACCGCAATGGATGGGATGCTCGTGAGT
GGACGGAGCTAGGGGCGGCTGCCGCTGCCGCCGCCACCGTGGCGCGTGGT
GAGGCCTCGATGAGCACGAGAGGTGACGGCGTCGACGACAGGTTCTCCTC
GCGTCCCTACTATGCCTACTATTACGGCAACGTGGGTTCGACAGCAGCGG
CGGGCGGCGGTGTGAGTGGGAAGGGAGGGTACGCGACCGCTCTTCCTTTG
CCCAGCGGTGGTGATGTCGTCCGTGAGCACGCAAGCGGGAATGGGTTGGA
ACTCGGCCACGGTGTTCTCGGTAGCGGCACGCGAGCAGACGATGGTGGGA
GCAGCGGACGGAAATCTCCGGGCGGTTTCGACCCTAACGCCTCGTCTTCC
CGCATTTTCAACCCAGGCGTCGACAGTCCATTTCAAGGTGCAGATGACGA
TGATGGAGAGGGAGTGATATCACGTCGGGAGTACGATGAGAGCACGGGAT
GGCGGCGGCGACGAGGCGTGGGGACGAGGCGTGGGAGAAGGCTTGGATAC
CAACGAAGACACGCCAGATGAAAGCAACGGCGCAGAAAACAACGAGCGTT
GGCAACAGGCCGGGAGGGGGTCTGGAGGTCTTCTGCCTGGAGACGACGAT
GGCGCGGTTCCCGGCGGCCGGAGGGGGGGTGCCAACGGCCGAGGACGCTG
GAGAGACAGCGGGTACGATACCGCCGGTGGCGGGTACAACGACAACGCCG
CGGTAACTGATGGCGCAGAGCGACGAGGCGGAGGGAGACAGGGCCAGGGC
AGGGCTTGGAACGAGCGTGGTGGCGGCGGTGGACGCGATAGTGGTCCAGA
GGACGGGGAAAACGCGATAGGAGATTTCTACGATGTGCGCCCGTCTTTCG
CTCAGAGCCAACGCGGCGGCGGTGGGGGCGCAAGTACGGGCAATAATGGC
AGCGGTGGTCTTGTCGACCGTTCCGCGGAGCATTCCTCGGGGTCGTGGCT
GCCGGGACCTGGAGCATCTGAGAGTTATTTTTCGAACGCTTCTAGTGGTA
GCGGACGAACAGGCAGCGGCACGAGCAGCGGAGGTGGCATGATGAACGTA
GATACGAGCAGAGGTCTCGCCAGCATCACCACCGCCGAGGAAGCCTTCAC
TACTCTCGGCCGACCGCAGCAGCATCACTCCGGTTCCGTCAACGCTCCAG
CTTCGGCGTCGCCGGCGACGGGTTTGTATGGCGGTGGCGGCGGCGGGACC
GGTGGCGCTCGCGACCGCAATGGATGGGATGCTCGTGAGTGGACGGAGCT
AGGGGCGGCTGCCGCTGCCGCCGCCACCGTGGCGCGTGGTGAGGCCTCGA
TGAGCACGAGAGGTGACGGCGTCGACGACAGGTTCTCCTCGCGTCCCTAC
TATGCCTACTATTACGGCAACGTGGGTTCGACAGCAGCGGCGGGCGGCGG
TGTGAGTGGGAAGGGAGGGTACGCGACCGCTCTTCCTTTGCCCAGCGGTG
GTGATGTCGTCCGTGAGCACGCAAGCGGGAATGGGTTGGAACTCGGCCAC
GGTGTTCTCGGTAGCGGCACGCGAGCAGACGATGGTGGGAGCAGCGGACG
GAAATCTCCGGGCGGTTTCGACCCTAACGCCTCGTCTTCCCGCATTTTCA
ACCCAGGCGTCGACAGTCCATTTCAAGGTGCAGATGACGATGATGGAGAG
GGAGTG back to top
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