mRNA_H-paniculata_contig14545.2723.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig14545.2723.1
Unique NamemRNA_H-paniculata_contig14545.2723.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig14545.2723.1 vs. uniprot
Match: D7G6W2_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W2_ECTSI)

HSP 1 Score: 479 bits (1234), Expect = 6.480e-153
Identity = 256/429 (59.67%), Postives = 309/429 (72.03%), Query Frame = 1
Query:    1 KLVPRSLPNLADVPVGAVTLGKSYVTRPFLLRSAISHVMNPALAKAPCVLAGMGGGGKTVLASAVVRDRKIREYFRAGIFWLKVGQNAKEDLHALLRGLVLELAARDTKYLPQLESLEDVTRHLTAVDANS-SPRLVVLDDVWEGEVVDALEHTGMQLLVTTRDRAVVSVPGGSVEVGDMEENEALEVLSVGCGAFRTVELPRVEALQVAADCGKLALALDLAAPLLKSPPQDPNSWRILHDALA----ARLGMHRAMTVGTRVQAVLETSFGAMADDPRRQERCLFLAVLAPGTLAPPDMLQELWNEARGAARTFAKQLVDQSMLQAVGDAYRVHDLVLRFLKPKLKADPSRLVATSRVVEYCGQRRVLHRYTEDGATAGGLYSLIALWRSAESLSEDQQVAAAYKRSLDGVTEGEPWLQASHVLGLM 1272
            +L P +LP +A VP G ++L   +++RP LL  AI ++ N A+  APCVL GM G GK+VLASAVVRD K+RE+F AG+FW++  ++AK+ LHA L G  L +A+      P L S+E+VTR+L AV A+S SPRLVVLDDVWE E+VDAL+ TG+QLLVTTRDR+VVS+PG  VEVGDMEE+EALEVL VGCGA + +ELPR EALQ                     PPQDP SWR LH+AL+     RLG  R M V  RV AVLE S GAMADDP +Q+RCLFLAVLAPGTLAP DML++LW+EA GA +TFA QLVDQSMLQ  GDA+RVHDLVL FLKPKLKADP+R +ATSR  EY GQ +VL RY  DG T+ G+Y+L+ALWRS E L  + +VAA Y  +L GV E  PW QA  VL LM
Sbjct:  205 QLRPPTLPAMASVPAGPISLTDGHISRPSLLGRAIGYLTNTAVGDAPCVLTGMAGAGKSVLASAVVRDEKVREHFHAGMFWVRA-RDAKDQLHACLEGFALRVASTSGTTSPGLGSVEEVTRYLKAVCADSVSPRLVVLDDVWEREIVDALKLTGLQLLVTTRDRSVVSMPGECVEVGDMEEDEALEVLRVGCGASKNLELPRAEALQ--------------------GPPQDPKSWRTLHEALSKAMSTRLGTDRIMAVPKRVDAVLEVSLGAMADDPAKQQRCLFLAVLAPGTLAPSDMLEDLWDEAPGATKTFAAQLVDQSMLQPAGDAFRVHDLVLLFLKPKLKADPNRPIATSRFAEYLGQLKVLRRYLGDGETSDGVYALMALWRSVEDLVGESRVAAVYMNNLQGVPEHAPWRQAGRVLELM 612          
BLAST of mRNA_H-paniculata_contig14545.2723.1 vs. uniprot
Match: A0A6H5KMV3_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMV3_9PHAE)

HSP 1 Score: 344 bits (883), Expect = 8.930e-111
Identity = 198/376 (52.66%), Postives = 242/376 (64.36%), Query Frame = 1
Query:    1 KLVPRSLPNLADVPVGAVTLGKSYVTRPFLLRSAISHVMNPALAKAPCVLAGMGGGGKTVLASAVVRDRKIREYFRAGIFWLKVGQNAKEDLHALLRGLVLELAARDTKYLPQLESLEDVTRHLTAVDANS-SPRLVVLDDVWEGEVVDALEHTGMQLLVTTRDRAVVSVPGGSVEVGDMEENEALEVLSVGCGAFRTVELPRVEALQVAADCGKLALALDLAAPLLKSPPQDPNSWRILHDALAARLGMHRAMTVGTRVQAVLETSFGAMADDPRRQERCLFLAVLAPGTLAPPDMLQELWNEARGAARTFAKQLVDQSMLQAVGDAYRVHDLVLRFLKPKLKADPSRLVATSRVVEYCGQRRVLHRYTEDGATA 1125
            +L P +LP +A VP G ++L   +++RP LL  AI ++ N A+  APCVL GM G GK+VLASAVV+  K+RE+F AG++W++  ++AK+ LHA L GL L +A+      P L S+E+VTR+L AV A+S SPRL+VLDDVWE EVVD L+ TG+QLLVTTRDR+VVS+PG  VEVGDME+ EALE+L VGCGA + +ELPR E LQV  DCG                                     R MTV  RV AVLE S GAMA+DP +Q RCLFLA                   A GAA+TFA+QLVDQSMLQ  GDA RVHDLVL FLKPKLKAD SR + TSR+ EY G  +VL RY EDG  A
Sbjct:  186 QLRPPTLPAMASVPAGPISLTDGHISRPSLLGRAIGYLTNTAVGDAPCVLTGMAGAGKSVLASAVVQVEKVREHFHAGMYWVRA-RDAKDQLHACLEGLALRVASTSGTTAPGLGSVEEVTRYLKAVCADSVSPRLIVLDDVWEREVVDTLKLTGLQLLVTTRDRSVVSMPGECVEVGDMED-EALELLRVGCGASKNLELPRAEVLQVVVDCGN-----------------------------------DRIMTVPKRVDAVLEVSLGAMAEDPAKQRRCLFLA-------------------APGAAKTFARQLVDQSMLQPAGDALRVHDLVLLFLKPKLKADSSRPITTSRIAEYLGHLKVLRRYVEDGRRA 505          
BLAST of mRNA_H-paniculata_contig14545.2723.1 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE)

HSP 1 Score: 270 bits (690), Expect = 2.320e-81
Identity = 185/416 (44.47%), Postives = 254/416 (61.06%), Query Frame = 1
Query:   28 LADVPVGAVTLGKSYVTRPFLLRSAISHVMNPALAKAPCVLAGMGGGGKTVLASAVVRDRKIREYFRAGIFWLKVGQNAKEDLHALLRGLVLELAAR--DTKY-LPQ-LESLEDVTRHL-TAVDANSSPRLVVLDDVWEGEVVDALEHTGMQLLVTTRDRAVVSVPGGSVEVGDMEENEALEVLSVGCGAFRTVELP----RVEALQVAADCGKLALALDLAAPL--LKSPPQDPNSWRIL---HDALAARLGMHRAMTVGTRVQAVLETSFGAMADDPRRQERCLFLAVLAPGTLAPPDMLQELWN-EARGAARTFAKQLVDQSMLQAVGDA-YRVHDLVLRFLKPKLKADPSRLV-ATSRVVEYCGQRRVLHRY--TEDGATAGGLYSLIALWRSAESLSEDQQV-AAAYKRSL 1215
            +A VP GA+TL +SYV R   ++     ++ P   +AP  + GMGGGGKT+L SAVVR   +RE+FR G+FW++VG++AK  L +LL+GL  E++A   DT + +P  LESLE V +HL T   A +SPRLVVLDDVWE EVVDAL   G+++LVTTRDR+VV V GG +E+GDM E EALE+L       RTV  P    R +  +V   CG L L L +A  +  +K       +W  L    + +A ++ +    +  + ++ VL TSF A+A   R+QE  L + VLA G LAP +ML+ LW  E     R  A+ LV + +LQAVG + YRVHDLVL F+K  ++A+   +  AT+   +Y G+  VL  Y   E GA   GL+ L ALWRS E LS D ++  A+Y+ SL
Sbjct:    1 MAAVPAGALTLPQSYVERA-AVQEVADGLIKPEEPRAPYAVVGMGGGGKTMLVSAVVRKSNVREHFRGGVFWMRVGRHAKNSLLSLLQGLAREMSAAPTDTPHGVPHVLESLEQVKQHLATVASAGTSPRLVVLDDVWEREVVDALLSLGLKVLVTTRDRSVVGVSGGLLELGDMTEEEALELL---LKTSRTVGQPGHEVRTQMTKVVVLCGHLPLVLAIAGSMSVVKGKGLTAVAWEELIKEFENVAKKMRVRGEQS--SSIKVVLGTSFDALA--ARKQEESLKMTVLAAGALAPIEMLRNLWEIEDAEGTREEAEGLVSKCLLQAVGGSGYRVHDLVLEFVKTSIRAEEEMVEKATALQAQYLGRVDVLKSYGDPEHGAGNQGLFFLDALWRSVEKLSGDPELEVASYRASL 408          
BLAST of mRNA_H-paniculata_contig14545.2723.1 vs. uniprot
Match: A0A6H5KU94_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU94_9PHAE)

HSP 1 Score: 265 bits (676), Expect = 2.510e-75
Identity = 185/419 (44.15%), Postives = 242/419 (57.76%), Query Frame = 1
Query:    4 LVPRSLPNLADVPVGAVTLGKSYVTRPFLLRSAISHVMNPALAKAPCVLAGMGGGGKTVLASAVVRDRKIREYFRAGIFWLKVGQNAKEDLHALLRGLVLELAAR--DTKY-LPQ-LESLEDVTRHLTAV-DANSSPRLVVLDDVWEGEVVDALEHTGMQLLVTTRDRAVVSVPGGSVEVGDMEENEALEVLSVGCGAF-RTVELPRVEALQVAADCGKLALALDLAA--PLLKSPPQDPNSWRILHDALAARLG-MHRAMTVGTRVQAVLETSFGAMADDPRRQERCLFLAVLAPGTLAPPDMLQELWN-EARGAARTFAKQLVDQSMLQAVGDA-YRVHDLVLRFLKPKLKADPSRLVATSRV-VEYCGQRRVLHRYT--EDGATAGGLYSLIALWRSAESLSEDQQVAA-AYKRSL 1215
            ++P SLP++A VP  AV L  S       +R     + NP   +AP  + GMGGGGK+VLASAVVR   +RE+FR GIFWL VG+ AK+ L  LL+GL  ++ A   DT + +P  L+SLE V RHL AV    +SPRLVVLDDVWE EVVDAL   G ++LVTTRDR+VV VP   +E+GDM E EALE+L    G   R  +  R    +V   CG+L L L +A   P++K       +W  L D L   +  M  ++     +  VLETSF A+    R+++     AVLAPG +A  +ML  LW  E  G  R  A+ LV + +LQ VG   YRVHDLVL F+K K+KAD       + +  ++ G+  VL  Y   E GA   GL+ L ALWRS E LS D ++   +Y  SL
Sbjct:  128 VLPPSLPDMAKVPAEAVALSDSLYVERAAVRKVADGITNPEEPRAPYTVFGMGGGGKSVLASAVVRKSSVREHFRGGIFWLTVGRGAKKRLLPLLQGLTGDMGAAPTDTPHGVPHVLDSLEQVQRHLGAVASTGTSPRLVVLDDVWEREVVDALLPLGFKVLVTTRDRSVVGVPTRCLELGDMTEEEALELLLKTSGTVGRPGDSVRTVMTKVVTLCGRLPLVLAIAGSLPVVKGKGLTAGAWGKLIDELENVVTKMEASLEDSNSLNVVLETSFDALTF--RKKQAFKKTAVLAPGAVASTEMLLNLWETEDTGGTREDAEGLVSKCLLQDVGGGGYRVHDLVLDFVKIKIKADMEMAKKIAALQAQFLGRLNVLKSYEHPEHGAGNQGLFVLDALWRSVEQLSGDPKLEVPSYSTSL 544          
BLAST of mRNA_H-paniculata_contig14545.2723.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 4.450e-75
Identity = 183/422 (43.36%), Postives = 244/422 (57.82%), Query Frame = 1
Query:    4 LVPRSLPNLADVPVGAVTLGKSYVTRPFLLRSAISHVMNPALAKAPCVLAGMGGGGKTVLASAVVRDRKIREYFRAGIFWLKVGQNAKEDLHALLRGLVLELAARDTKY---LPQ-LESLEDVTRHLTAV-DANSSPRLVVLDDVWEGEVVDALEHTGMQLLVTTRDRAVVSVPGGSVEVGDMEENEALEVLSVGCGAFRTVELP----RVEALQVAADCGKLALALDLAAPL--LKSPPQDPNSWRILHDALAARLGMHRAM-TVGTRVQAVLETSFGAMADDPRRQERCLFLAVLAPGTLAPPDMLQELWN-EARGAARTFAKQLVDQSMLQAVGDA-YRVHDLVLRFLKPKLKADPSRLV-ATSRVVEYCGQRRVLHRY--TEDGATAGGLYSLIALWRSAESLSEDQQV-AAAYKRSL 1215
            L+P SLP++A VP GA+ L  S       ++     +  P  ++AP  + GMGGGGK+VLASA VR   +RE+FR GIFW++VG+ AK  L ALL+GL  ++ A  T     +P  L+ LE V +HL AV    +SPRLVVLDDVWE EVVDA    G ++L+TTRDR+VV +P G +E+GDM E EALE+L    G   TV  P    R +  +V A CG L L L +A  +  ++       +W  L   L       RA     + ++ VLETSF ++A   R+QE  L +AVLA G LAP +ML+ LW  E     R  A+ LV + +L AVG   YRVHDLVL F K  ++A+   +  AT+   +Y G+  VL  Y   E GA   GL+ L ALWRS E LS D ++  A+Y  SL
Sbjct:  251 LLPPSLPDMAAVPTGALELPSSSYVERAAVQEVADGLTTPEESRAPYTVVGMGGGGKSVLASAAVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAWDVGAAPTDAPHGVPHVLDRLEQVQQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGLPAGRLELGDMTEEEALELLRKTSG---TVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLA--VRKQEEFLKMAVLAAGALAPIEMLRNLWEVEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRAEEETVKKATALQAQYLGRLDVLEGYGDPEHGAGGQGLFFLDALWRSVEKLSGDPELEVASYHNSL 667          
BLAST of mRNA_H-paniculata_contig14545.2723.1 vs. uniprot
Match: D7FUD7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD7_ECTSI)

HSP 1 Score: 263 bits (673), Expect = 1.980e-74
Identity = 177/425 (41.65%), Postives = 244/425 (57.41%), Query Frame = 1
Query:    4 LVPRSLPNLADVPVGAVTLGKSYVTRPFLLRSAISHVMNPALAKAPCVLAGMGGGGKTVLASAVVRDRKIREYFRAGIFWLKVGQNAKEDLHALLRGLVLELAARDTKY---LPQ-LESLEDVTRHLTAV-DANSSPRLVVLDDVWEGEVVDALEHTGMQLLVTTRDRAVVSVPGGSVEVGDMEENEALEVLSVGCGAFRTVELPRVEALQVAADCGKLALALDLAAPL--LKSPPQDPNSWRILHDALAARLGMHRAM-TVGTRVQAVLETSFGAMADDPRRQERCLFLAVLAPGTLAPPDMLQELWN-EARGAARTFAKQLVDQSMLQAVGDA-YRVHDLVLRFLKPKLKADPSRLV-ATSRVVEYCGQRRVLHRY--TEDGATAGGLYSLIALWRSAESLSEDQQV-AAAYKRSLDGVTEGE 1236
            ++P SLP++A+VPVGA+ L  S       ++     + NP   + P  + G+GGGGK+VLASAVVR   +RE+FR GI W++VG+ AK  L  LL+GL  E+ A  T     +P  L+SLE V +HL AV    +SPRLVVLDDVWE EVVDA    G +LL+TTRDR++V  P G +E+GDM E EALE+L    G     +  R++  +V A CG L L L +A  +  +K       +W  L           RA     + ++ VLET+F ++A   R+Q+  L +AVLA G LAP +ML  LW  E        A+ LV + +L AVG   YR+HDLVL F K  ++A+   +  AT+   +Y G+  V+  Y   E GA   G++ L ALWRS E LS D Q+  A+Y+ SL  +  GE
Sbjct:   36 ILPPSLPDMAEVPVGALELPHSSYVERAAVQEVADGLTNPEEPRTPYTVVGIGGGGKSVLASAVVRMPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREVGAAPTDAPHGVPHALDSLEQVQQHLAAVASTRNSPRLVVLDDVWEREVVDAFVPLGFKLLLTTRDRSIVCDPAGRLELGDMTEEEALELLRKTSGTVDPGDDVRMKMTKVVALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKEFENVAKKMRARGQQSSSIKVVLETTFDSLAT--RKQKEFLMMAVLAAGALAPIEMLSNLWEIEDAEGTHAEAEGLVSKYLLHAVGGGGYRMHDLVLDFAKTSIRAEEETVKRATALQAQYLGRLDVVESYGDPEHGAGDQGIFFLDALWRSVEKLSGDPQLEVASYRASLGALEWGE 458          
BLAST of mRNA_H-paniculata_contig14545.2723.1 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI)

HSP 1 Score: 263 bits (673), Expect = 2.160e-74
Identity = 181/420 (43.10%), Postives = 247/420 (58.81%), Query Frame = 1
Query:    4 LVPRSLPNLADVPVGAVTLGKSYVTRPFLLRSAISHVMNPALAKAPCVLAGMGGGGKTVLASAVVRDRKIREYFRAGIFWLKVGQNAKEDLHALLRGLVLELAARDTKY---LPQ-LESLEDVTRHLTAVDAN-SSPRLVVLDDVWEGEVVDALEHTGMQLLVTTRDRAVVSVPGGSVEVGDMEENEALEVLSVGCGAF-RTVELPRVEALQVAADCGKLALALDLAAPL--LKSPPQDPNSWRILHDALAARLGMHRAM-TVGTRVQAVLETSFGAMADDPRRQERCLFLAVLAPGTLAPPDMLQELWN-EARGAARTFAKQLVDQSMLQAVGDA-YRVHDLVLRFLKPKLKADPSRLV-ATSRVVEYCGQRRVLHRY--TEDGATAGGLYSLIALWRSAESLSEDQQV-AAAYKRSLD 1218
            L+P SLP++A VP GA+ L  S       ++     +  P  ++AP  + GMGGGGK+VLASAVVR   +RE+FR GIFW++VG+ AK  L ALL+GL  ++ A  T     +P+ L+SLE V +HL AV +  +S RLVVLDDVWE EVVDA    G ++L+TTRDR+VV VP G +E+GD+ E EALE+L    GA  +  +  R +  +V A CG L L L +A  +  ++       +W  L   L       RA     + ++ VLETSF ++A   R+QE  L +AVLA G LAP +ML+ LW  E     R  A+ LV + +L AVG   YRVHDLVL F K  ++A+   +  AT+   +Y G+  VL  Y   E G    GL+ L ALWRS E LS D  +  A+Y+ SL+
Sbjct:  234 LLPPSLPDMAAVPAGALELPSSSYVERAAVQEVADGLTAPEESRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLARDVGAAPTDAPCGVPRVLDSLEQVRQHLAAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLELGDVTEEEALELLRKTSGAVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLA--VRKQEEFLKMAVLAAGALAPIEMLRNLWEIEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRAEEETVKKATALQAQYLGRLDVLESYGDPEHGTGDQGLFFLDALWRSVEKLSGDPGLEVASYRASLE 651          
BLAST of mRNA_H-paniculata_contig14545.2723.1 vs. uniprot
Match: D8LPV9_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV9_ECTSI)

HSP 1 Score: 262 bits (669), Expect = 2.700e-74
Identity = 178/424 (41.98%), Postives = 251/424 (59.20%), Query Frame = 1
Query:    4 LVPRSLPNLADVPVGAVTLGKSYVTRPFLLRSAISHVMNPALAKAPCVLAGMGGGGKTVLASAVVRDRKIREYFRAGIFWLKVGQNAKEDLHALLRGLVLELAARDTKY---LPQL-ESLEDVTRHLTAV-DANSSPRLVVLDDVWEGEVVDALEHTGMQLLVTTRDRAVVSVPGGSVEVGDMEENEALEVLSVGCGAFRTVELP----RVEALQVAADCGKLALALDLAA--PLLKSPPQDPNSWR-ILHDALAARLGMHRAMTVGTRVQAVLETSFGAMADDPRRQERCLFLAVLAPGTLAPPDMLQELWN--EARGAARTFAKQLVDQSMLQAV-GDAYRVHDLVLRFLKPKLKADPSRLV-ATSRVVEYCGQRRVLHRYTED--GATAGGLYSLIALWRSAESLSEDQQVAAAYKRSLDG 1221
            ++P +LP  A VP GA+ L +SYV RP + + A+  +M+P  A AP ++ GMGGGGKTVLASA+VR   + E+FR GIFW+++G+ A + L   L+GL  E+ A  T     +P + +SLE V +HL AV    SSPRLVVLDDVWE EVV A    G+++LVTTRDR++V VPGG +E+GDM E+EALE+L    G   TV  P    R +  +V   CG+L L L +A   P++K       +W  ++ +       M         +  VL  SF A+A   R++E  L +AVLAPG +AP +ML+ LW   +  G     A+ LV++ +LQ V G  YRVHDL+L++L+ K+K D  R+  AT+   +Y G+  V+  Y +   GA   GL+ L  LWR  E LS D  +  A  R++ G
Sbjct:  229 VLPPTLPQRAAVPTGALALPRSYVERPGV-QEAMGDLMDPEKALAPYMIVGMGGGGKTVLASALVRKSSVLEHFRGGIFWMEMGRGANKSLLHRLQGLAREMGAAPTDAPHGVPHVFDSLEQVMQHLAAVVSRGSSPRLVVLDDVWEREVVAAFLGVGLKVLVTTRDRSIVGVPGGLLELGDMAEDEALELLWKTSG---TVGQPGDGVRTQMTKVVDRCGRLPLVLAIAGSMPVVKGKGLKDGAWEELIEEFENVTTIMWEPGEESRNLDMVLGASFNALA--ARKREEFLRMAVLAPGAVAPFEMLRNLWEIQDVEGTKEE-AEGLVNKCLLQDVDGVGYRVHDLLLKYLRVKIKQDGERVKKATALQAQYLGRLDVVMSYGDQKHGADNQGLFGLGTLWRCLEKLSGDPVLETASYRAILG 645          
BLAST of mRNA_H-paniculata_contig14545.2723.1 vs. uniprot
Match: A0A6H5JLW6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW6_9PHAE)

HSP 1 Score: 249 bits (636), Expect = 3.570e-73
Identity = 162/353 (45.89%), Postives = 210/353 (59.49%), Query Frame = 1
Query:  157 MGGGGKTVLASAVVRDRKIREYFRAGIFWLKVGQNAKEDLHALLRGLVLELAARDTKYLPQ-----LESLEDVTRHLTAV-DANSSPRLVVLDDVWEGEVVDALEHTGMQLLVTTRDRAVVSVPGGSVEVGDMEENEALEVLSVGCGAF--RTVELPRVEALQVAADCGKLALALDLAAPLLKSPPQDPNSWRILHDALAARLGMHRAMTVGTRVQAVLETSFGAMADDPRRQERCLFLAVLAPGTLAPPDMLQELWNEARGAARTFAKQLVDQSMLQAVGDAYRVHDLVLRFLKPKL---KADPSRLVATSRVVEYCGQRRVLHRYTEDGATAGGLYSLIALWRSAESLSED 1182
            MGGGG+TVL SAVVR+  + EYFR GIF + VG+ AK  L  LL+GL  E+ A    + P      L+SLE V +HLT V    +SPRLVVLDDV E EVV+AL   G++L+VTTRDR+VV VPGG +EVGDM E EALE+L +  GA   R  +LP             LA+A+  A    +  P  P++W  LH+ L+A+        +   +  VLE SF A+  D +  ER   L VLA G LAP +ML  LW++  G +  F  QLVD+S++QAV   YR+HDLVL F+K KL   K +   LV TSR+ +Y  +  VL  Y E     GGL++L+ LW S E LS D
Sbjct:    1 MGGGGETVLVSAVVRELSVLEYFRGGIFLMSVGRGAKNRLLPLLQGLAREMGAAPA-HAPHGNPGDLDSLEHVMQHLTTVVSTGTSPRLVVLDDVLEREVVEALLPLGLKLVVTTRDRSVVGVPGGCLEVGDMTEEEALELLMLASGAVSSRIADLP-------------LAMAVIGAMDESRESPHRPDTWTKLHEKLSAKPEFVYEEGLDNGLGNVLELSFSALDADAK--ERFRRLGVLAGGALAPMEMLSYLWDQGPGNSLLFVGQLVDKSLVQAVEHKYRLHDLVLAFVKSKLCCLKMERVVLV-TSRLAQYLSRLSVLQEYAEADEMQGGLFALMGLWGSVEELSRD 336          
BLAST of mRNA_H-paniculata_contig14545.2723.1 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE)

HSP 1 Score: 247 bits (631), Expect = 2.760e-71
Identity = 183/443 (41.31%), Postives = 243/443 (54.85%), Query Frame = 1
Query:    4 LVPRSLPNLADVPVGAVTLG-KSYVTRPFLLRSAISHVMNPALAKAPCVLAGMGGGGKTVLASAVVRDRKIREYFRAGIFWLKVGQNAKEDLHALLRGLVLELAARDTKY---LPQ-LESLEDVTRHLTAVDANSS-PRLVVLDDVWEGEVVDALEHTGMQLLVTTRDRAVVSVPGGSVEVGDMEENEALEVLSVGCGAF-RTVELPRVEALQVAADCGKLALALDLAAPL--LKSPPQDPNSWRILHDALAARLGMHRAM-TVGTRVQAVLETSFGAMADDPRRQERCLFLAVLAPG-----------------------------TLAPPDMLQELWN-EARGAARTFAKQLVDQSMLQAVGDA-YRVHDLVLRFLKPKLKADPSRL-VATSRVVEYCGQRRVLHRYT--EDGATAGGLYSLIALWRSAESLSEDQQVAAA 1200
            L+P SLP++A VP GA+ L   SYV R   ++     + +P   +AP  + GMGGGGK+VLASAVVR   +RE+FR GIFW++VG+ AK  L ALL+GL  E+ A  T     +P  L+ LE V +HL AV +  + PRLVVLDDVWE EVVDA    G ++L+TTRDR+VV VP G +EVGDM E EALE+L    GA  +  +  R +  +V A CG L L L +A  +  +K       +W+ L + L       RA     + + AVLETSF ++A   R+QE  L LAVLA                                LAP +ML+ LW  E     R  A+ LV + +L AVG   YRVHDLVL + K +++AD   +   T+    + G+  VL  Y   E GA    L+ L ALWRS E LS D ++  A
Sbjct:  197 LLPPSLPDMAAVPAGALELPCSSYVERA-AVQEVADGLTSPEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAARTDAPHTVPHVLDGLEQVKQHLAAVASTGTFPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVVVPAGRLEVGDMTEEEALELLRKSSGAVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVKGKGLTAVAWKELAENLENVAKKMRARGEQSSSINAVLETSFDSLA--VRKQEEFLKLAVLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPIEMLRNLWEIEDAEGTRDEAEGLVSKCLLHAVGGGGYRVHDLVLEYAKTRIRADAEMVRKVTALQAHFLGRLDVLKSYRDPEHGAGNQSLFFLDALWRSVEKLSGDPELEVA 636          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14545.2723.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6W2_ECTSI6.480e-15359.67NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KMV3_9PHAE8.930e-11152.66NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5LJA6_9PHAE2.320e-8144.47NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KU94_9PHAE2.510e-7544.15NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G722_ECTSI4.450e-7543.36NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7FUD7_ECTSI1.980e-7441.65NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7G720_ECTSI2.160e-7443.10NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D8LPV9_ECTSI2.700e-7441.98NB-ARC and TPR repeat-containig protein n=1 Tax=Ec... [more]
A0A6H5JLW6_9PHAE3.570e-7345.89NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KXS7_9PHAE2.760e-7141.31NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14545contigH-paniculata_contig14545:649..2852 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score484.2
Seed ortholog evalue6.4e-134
Seed eggNOG ortholog2880.D7G6W2
KEGG koko:K10407
KEGG Pathwayko05132,map05132
Hectar predicted targeting categoryother localisation
EggNOG free text desc.determination of stomach left/right asymmetry
EggNOG OGsCOG0457@1,KOG1840@2759,KOG4658@1,KOG4658@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko04812
Exons3
Model size1302
Cds size1302
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14545.2723.1prot_H-paniculata_contig14545.2723.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig14545 649..2852 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929158.0970547-CDS-H-paniculata_contig14545:648..10411622929158.0970547-CDS-H-paniculata_contig14545:648..1041Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14545 649..1041 -
1691480753.2891529-CDS-H-paniculata_contig14545:648..10411691480753.2891529-CDS-H-paniculata_contig14545:648..1041Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14545 649..1041 -
1622929158.1088252-CDS-H-paniculata_contig14545:1720..20081622929158.1088252-CDS-H-paniculata_contig14545:1720..2008Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14545 1721..2008 -
1691480753.3012905-CDS-H-paniculata_contig14545:1720..20081691480753.3012905-CDS-H-paniculata_contig14545:1720..2008Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14545 1721..2008 -
1622929158.1197505-CDS-H-paniculata_contig14545:2231..28521622929158.1197505-CDS-H-paniculata_contig14545:2231..2852Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14545 2232..2852 -
1691480753.3096724-CDS-H-paniculata_contig14545:2231..28521691480753.3096724-CDS-H-paniculata_contig14545:2231..2852Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14545 2232..2852 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig14545.2723.1

>prot_H-paniculata_contig14545.2723.1 ID=prot_H-paniculata_contig14545.2723.1|Name=mRNA_H-paniculata_contig14545.2723.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=434bp
KLVPRSLPNLADVPVGAVTLGKSYVTRPFLLRSAISHVMNPALAKAPCVL
AGMGGGGKTVLASAVVRDRKIREYFRAGIFWLKVGQNAKEDLHALLRGLV
LELAARDTKYLPQLESLEDVTRHLTAVDANSSPRLVVLDDVWEGEVVDAL
EHTGMQLLVTTRDRAVVSVPGGSVEVGDMEENEALEVLSVGCGAFRTVEL
PRVEALQVAADCGKLALALDLAAPLLKSPPQDPNSWRILHDALAARLGMH
RAMTVGTRVQAVLETSFGAMADDPRRQERCLFLAVLAPGTLAPPDMLQEL
WNEARGAARTFAKQLVDQSMLQAVGDAYRVHDLVLRFLKPKLKADPSRLV
ATSRVVEYCGQRRVLHRYTEDGATAGGLYSLIALWRSAESLSEDQQVAAA
YKRSLDGVTEGEPWLQASHVLGLMVRRVLNFVR*
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mRNA from alignment at H-paniculata_contig14545:649..2852-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig14545.2723.1 ID=mRNA_H-paniculata_contig14545.2723.1|Name=mRNA_H-paniculata_contig14545.2723.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2204bp|location=Sequence derived from alignment at H-paniculata_contig14545:649..2852- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAACTTGTGCCGAGAAGTCTGCCGAATCTGGCCGACGTACCTGTAGGCGC GGTCACCCTAGGTAAATCATACGTGACGCGACCTTTTTTACTGAGGAGCG CCATCAGCCACGTCATGAATCCGGCCCTGGCCAAGGCTCCCTGTGTGCTT GCCGGCATGGGCGGAGGGGGCAAGACAGTCCTGGCGTCCGCGGTTGTACG GGACAGGAAGATTCGGGAGTATTTTCGTGCGGGAATATTTTGGCTGAAGG TGGGACAAAACGCTAAGGAAGATCTCCATGCTTTGTTGCGAGGGCTGGTC TTGGAGTTGGCGGCAAGGGACACCAAATATCTTCCCCAGCTCGAAAGCTT GGAAGACGTGACACGTCACCTAACTGCAGTTGATGCGAATAGCTCACCGC GCTTGGTCGTGTTGGACGACGTGTGGGAGGGGGAAGTCGTGGATGCTCTA GAACACACGGGAATGCAGCTGCTGGTAACCACGCGCGACCGTGCCGTGGT ATCTGTGCCAGGAGGGTCCGTTGAGGTGGGGGATATGGAGGAGAACGAGG CGCTGGAGGTTCTGAGTGTCGGTTGTGGAGCGTTTCGAACAGTTGAACTT CCGCGAGTGGAAGCATTACAGGTGACAAGTCTGGTCTTTCGTGTTGATTT CTGGTGGCGGACAGATCCTAATACCTATAATATCATACCTCGAAACACAT ATTTGGGAGGACAGCTTGGTGCCCCGGACAGCGTTCGTGTATCCATCCCC CGTATTCGGCTGTTGGCGATAGTTTTGCGGTTGTTCCCAGGATCCAGGTT ACCGTTGATCGCACTTGACACAAACGCCCGCCTCGTCGCTCCAGGTCGCC GCTGACTGTGGGAAGCTGGCTCTTGCGCTTGACCTCGCCGCGCCGCTGCT AAAGAGCCCTCCACAAGATCCGAACTCTTGGCGCATTTTACATGATGCTC TGGCGGCGCGATTGGGGATGCACCGTGCCATGACGGTAGGAACACGTGTG CAAGCTGTCCTTGAGACAAGCTTCGGTGCCATGGCAGATGACCCCCGCAG GCAGGAGAGGTGTCTGTTCCTTGCGGTACTTGCTCCGGGTACGCTTGCAC CACCCGACATGTTACAGGAGTTGTGGAACGAGGTGCGATGCTGAGGTAGG GAAAGAGTAGGAGGAGTAGCCTGGCATAGTGCAGTAGTTGATGTCATGCC CAGAGTATTTTCTCGACGCCAGCAGGCGGAGGTATGTCGCGTTTCACTTG TGTTAGTCTACGAAACGTGTCGGGAATATACTTCTTGATGTCCAACATGG CGCGTCCTTACTCGCTATGGTCTATGCAAGCTCGCTGAAACCAGGTTAAG GTTCACGCCACGAGTGCTCTCAGAAGCTCAAATCCGGCAATTCGCAGTGT CTGACTACGGTGAAGATCCGCAGATGACGCAAAGCCACGATTAGGAGAGT TGGGAGAGAGTTGATTTTGTTTCATGCCCATAAATAGTTGCTCCAAAGTG CCCTCCATGCCAACACAGTGCACACCCAGAAATAGGACCAGGATGTGACC AGCCGACATCACCTATCTCCAAGGGCTCCTAGAGCTGACATGTGTCTACG GGCTTGTTGGCTGACTTCACATCGTGAATGTTTGCAGATCGGTGGACGCT TGTGCGCAGAGCAGAACTGGTCATAAACAAGACACTGTTGATTGGGCACG TTGAATTATGATTCGACTACTGGTTGCGCGATTCAAGTTTGTGATATTTT CGCCGTGAGGTTTCATTCTTCTTGGTGTTCTCCCGTGTGCTCAATGACGT GTTCTCAACAGGCCCGTGGGGCTGCGCGCACTTTTGCTAAACAGCTTGTG GATCAGTCCATGCTCCAAGCTGTAGGAGATGCTTACCGCGTTCACGACCT TGTCTTGCGTTTCCTGAAGCCCAAACTCAAGGCCGATCCCAGTCGGCTCG TAGCAACCTCGCGCGTTGTGGAATACTGCGGCCAGCGAAGGGTTCTGCAT AGATATACCGAGGATGGGGCGACAGCTGGCGGTTTGTACTCCCTGATCGC CCTGTGGAGGTCGGCGGAGAGCCTCTCAGAGGATCAACAAGTTGCAGCTG CCTACAAGAGGAGCCTTGACGGGGTAACGGAGGGTGAACCGTGGCTGCAG GCTAGCCATGTTCTAGGGCTCATGGTGCGGCGCGTGTTGAACTTTGTGCG TTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig14545:649..2852-

>mRNA_H-paniculata_contig14545.2723.1 ID=mRNA_H-paniculata_contig14545.2723.1|Name=mRNA_H-paniculata_contig14545.2723.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2604bp|location=Sequence derived from alignment at H-paniculata_contig14545:649..2852- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAACTTGTGCCGAGAAGTCTGCCGAATCTGGCCGACGTACCTGTAGGCGC
GGTCACCCTAGGTAAATCATACGTGACGCGACCTTTTTTACTGAGGAGCG
CCATCAGCCACGTCATGAATCCGGCCCTGGCCAAGGCTCCCTGTGTGCTT
GCCGGCATGGGCGGAGGGGGCAAGACAGTCCTGGCGTCCGCGGTTGTACG
GGACAGGAAGATTCGGGAGTATTTTCGTGCGGGAATATTTTGGCTGAAGG
TGGGACAAAACGCTAAGGAAGATCTCCATGCTTTGTTGCGAGGGCTGGTC
TTGGAGTTGGCGGCAAGGGACACCAAATATCTTCCCCAGCTCGAAAGCTT
GGAAGACGTGACACGTCACCTAACTGCAGTTGATGCGAATAGCTCACCGC
GCTTGGTCGTGTTGGACGACGTGTGGGAGGGGGAAGTCGTGGATGCTCTA
GAACACACGGGAATGCAGCTGCTGGTAACCACGCGCGACCGTGCCGTGGT
ATCTGTGCCAGGAGGGTCCGTTGAGGTGGGGGATATGGAGGAGAACGAGG
CGCTGGAGGTTCTGAGTGTCGGTTGTGGAGCGTTTCGAACAGTTGAACTT
CCGCGAGTGGAAGCATTACAGAAACTTGTGCCGAGAAGTCTGCCGAATCT
GGCCGACGTACCTGTAGGCGCGGTCACCCTAGGTAAATCATACGTGACGC
GACCTTTTTTACTGAGGAGCGCCATCAGCCACGTCATGAATCCGGCCCTG
GCCAAGGCTCCCTGTGTGCTTGCCGGCATGGGCGGAGGGGGCAAGACAGT
CCTGGCGTCCGCGGTTGTACGGGACAGGAAGATTCGGGAGTATTTTCGTG
CGGGAATATTTTGGCTGAAGGTGGGACAAAACGCTAAGGAAGATCTCCAT
GCTTTGTTGCGAGGGCTGGTCTTGGAGTTGGCGGCAAGGGACACCAAATA
TCTTCCCCAGCTCGAAAGCTTGGAAGACGTGACACGTCACCTAACTGCAG
TTGATGCGAATAGCTCACCGCGCTTGGTCGTGTTGGACGACGTGTGGGAG
GGGGAAGTCGTGGATGCTCTAGAACACACGGGAATGCAGCTGCTGGTAAC
CACGCGCGACCGTGCCGTGGTATCTGTGCCAGGAGGGTCCGTTGAGGTGG
GGGATATGGAGGAGAACGAGGCGCTGGAGGTTCTGAGTGTCGGTTGTGGA
GCGTTTCGAACAGTTGAACTTCCGCGAGTGGAAGCATTACAGGTCGCCGC
TGACTGTGGGAAGCTGGCTCTTGCGCTTGACCTCGCCGCGCCGCTGCTAA
AGAGCCCTCCACAAGATCCGAACTCTTGGCGCATTTTACATGATGCTCTG
GCGGCGCGATTGGGGATGCACCGTGCCATGACGGTAGGAACACGTGTGCA
AGCTGTCCTTGAGACAAGCTTCGGTGCCATGGCAGATGACCCCCGCAGGC
AGGAGAGGTGTCTGTTCCTTGCGGTACTTGCTCCGGGTACGCTTGCACCA
CCCGACATGTTACAGGAGTTGTGGAACGAGGTCGCCGCTGACTGTGGGAA
GCTGGCTCTTGCGCTTGACCTCGCCGCGCCGCTGCTAAAGAGCCCTCCAC
AAGATCCGAACTCTTGGCGCATTTTACATGATGCTCTGGCGGCGCGATTG
GGGATGCACCGTGCCATGACGGTAGGAACACGTGTGCAAGCTGTCCTTGA
GACAAGCTTCGGTGCCATGGCAGATGACCCCCGCAGGCAGGAGAGGTGTC
TGTTCCTTGCGGTACTTGCTCCGGGTACGCTTGCACCACCCGACATGTTA
CAGGAGTTGTGGAACGAGGCCCGTGGGGCTGCGCGCACTTTTGCTAAACA
GCTTGTGGATCAGTCCATGCTCCAAGCTGTAGGAGATGCTTACCGCGTTC
ACGACCTTGTCTTGCGTTTCCTGAAGCCCAAACTCAAGGCCGATCCCAGT
CGGCTCGTAGCAACCTCGCGCGTTGTGGAATACTGCGGCCAGCGAAGGGT
TCTGCATAGATATACCGAGGATGGGGCGACAGCTGGCGGTTTGTACTCCC
TGATCGCCCTGTGGAGGTCGGCGGAGAGCCTCTCAGAGGATCAACAAGTT
GCAGCTGCCTACAAGAGGAGCCTTGACGGGGTAACGGAGGGTGAACCGTG
GCTGCAGGCTAGCCATGTTCTAGGGCTCATGGTGCGGCGCGTGTTGAACT
TTGTGCGTTGAGCCCGTGGGGCTGCGCGCACTTTTGCTAAACAGCTTGTG
GATCAGTCCATGCTCCAAGCTGTAGGAGATGCTTACCGCGTTCACGACCT
TGTCTTGCGTTTCCTGAAGCCCAAACTCAAGGCCGATCCCAGTCGGCTCG
TAGCAACCTCGCGCGTTGTGGAATACTGCGGCCAGCGAAGGGTTCTGCAT
AGATATACCGAGGATGGGGCGACAGCTGGCGGTTTGTACTCCCTGATCGC
CCTGTGGAGGTCGGCGGAGAGCCTCTCAGAGGATCAACAAGTTGCAGCTG
CCTACAAGAGGAGCCTTGACGGGGTAACGGAGGGTGAACCGTGGCTGCAG
GCTAGCCATGTTCTAGGGCTCATGGTGCGGCGCGTGTTGAACTTTGTGCG
TTGA
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