prot_H-paniculata_contig14535.2718.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14535.2718.1
Unique Nameprot_H-paniculata_contig14535.2718.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length232
Homology
BLAST of mRNA_H-paniculata_contig14535.2718.1 vs. uniprot
Match: D7G257_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G257_ECTSI)

HSP 1 Score: 288 bits (737), Expect = 3.510e-89
Identity = 138/186 (74.19%), Postives = 156/186 (83.87%), Query Frame = 0
Query:    1 QLKISSSTKKWYRIMGHGGNIDIYDTEVRSWDVTKSMEHILKDCTSCDVGKSPRSYVLCVSEVV-NPDETCDGTAQKDMGECRMDIVKSQVSYLGYDATESYGITWKVRGLCEDLSNLD-LFDSVRVYGDLQDSDIHHLWYGQYSYGHLGGVWTNNLMHDNWQYGFDPHDDSDYLTISGNECYNNG 184
            +LK SS+ K W RIMGHGGNIDI  T VRSWD +K+++HILKD    D G + RS++ CVSEVV + DETCDGTAQ DMGECRMDIV S V+Y GYD TESYGITWKVRGLC+DLSN D LFDSVRVYGD+++SDI+ +WYG YSYGHLGGVWT+NLMHDN  YGFDPHDDSDYLTISGN CYNNG
Sbjct:  440 ELKFSSTKKAWNRIMGHGGNIDIDSTVVRSWDASKTLDHILKDS---DDGTTNRSFIACVSEVVVDADETCDGTAQNDMGECRMDIVDSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGDMKNSDIYGMWYGHYSYGHLGGVWTDNLMHDNHVYGFDPHDDSDYLTISGNTCYNNG 622          
BLAST of mRNA_H-paniculata_contig14535.2718.1 vs. uniprot
Match: D7G261_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G261_ECTSI)

HSP 1 Score: 254 bits (650), Expect = 5.310e-77
Identity = 118/185 (63.78%), Postives = 143/185 (77.30%), Query Frame = 0
Query:    1 QLKISSSTKKWYRIMGHGGNIDIYDTEVRSWDVTKSMEHILKDCTSCDVGKSPRSYVLCVSEVVNPDETCDGTAQKDMGECRMDIVKSQVSYLGYDATESYGITWKVRGLCEDLSNLD-LFDSVRVYGDLQDSDIHHLWYGQYSYGHLGGVWTNNLMHDNWQYGFDPHDDSDYLTISGNECYNNG 184
            ++ +SSS   ++RI G GG++  Y TEV SW       H L D    + G  PRSY+ C+SE++   +TCDG A+K+ GECRMD+++S +SYLGY+ATESYG++WKVRGLC DLSN D LFDSVRVYGDLQDSDI+ LWYG YSYGHLGG+WTNN MHDN  YGFDPHDDSDYLTI+GN CYNNG
Sbjct:  333 KILLSSSPTNYFRIRGAGGHLYFYQTEVTSWVEEDLAPHTLPD--DAEWGAEPRSYIGCLSEILEEGQTCDGVAKKERGECRMDVIESIISYLGYEATESYGLSWKVRGLCTDLSNQDTLFDSVRVYGDLQDSDIYGLWYGHYSYGHLGGMWTNNFMHDNHVYGFDPHDDSDYLTITGNTCYNNG 515          
BLAST of mRNA_H-paniculata_contig14535.2718.1 vs. uniprot
Match: D7FWW1_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW1_ECTSI)

HSP 1 Score: 245 bits (625), Expect = 2.880e-75
Identity = 112/184 (60.87%), Postives = 142/184 (77.17%), Query Frame = 0
Query:    1 QLKISSSTKKWYRIMGHGGNIDIYDTEVRSWDVTKSMEHILKDCTSCDVGKSPRSYVLCVSEVVNPDETCD-GTAQKDMGECRMDIVKSQVSYLGYDATESYGITWKVRGLCEDLSNLDLFDSVRVYGDLQDSDIHHLWYGQYSYGHLGGVWTNNLMHDNWQYGFDPHDDSDYLTISGNECYNN 183
            +LKI SST   + + GHGGN+DIY T ++SWD      HIL D ++   G  PRSY+ C SEVVN ++TCD G A++D GECRMD+V S++ ++GY A+ESYGITWKVRG CED+SN ++FD+V VYGD+ + DIHH+WYG YSYGH GGVWT++LMHDN+ YGFDPHDDSDYLTI  N  +NN
Sbjct:  155 ELKIRSSTTLIHAVRGHGGNLDIYKTLIQSWDENLLTAHILADDST---GDEPRSYIACTSEVVNENDTCDSGYAREDKGECRMDMVDSELGHMGYFASESYGITWKVRGFCEDMSNPEVFDNVNVYGDITNCDIHHMWYGMYSYGHQGGVWTDSLMHDNYVYGFDPHDDSDYLTIRNNTVWNN 335          
BLAST of mRNA_H-paniculata_contig14535.2718.1 vs. uniprot
Match: A0A6H5JNF4_9PHAE (MEP16 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF4_9PHAE)

HSP 1 Score: 236 bits (603), Expect = 1.840e-72
Identity = 111/187 (59.36%), Postives = 141/187 (75.40%), Query Frame = 0
Query:    1 QLKISSSTKKWYRIMGHGGNIDIYDTEVRSWDVTKSMEHILKDCTSCDVGKSPRSYVLCVSEVVNPDETCD-GTAQKDMGECRMDIVKSQVSYLGYDATESYGITWKVRGLCEDLSNLDLFDSVRVYGDLQDSDIHHLWYGQYSYGHLGGVWTNNLMH---DNWQYGFDPHDDSDYLTISGNECYNN 183
            +LKI SS    + + GHGGN+DIY T ++SWD      HIL D ++   G  PRSY+ C SEVVN ++TCD G A++D GECRMD+V S++ ++GY A+ESYGITWKVRG CED+SN ++FD+V VYGD+ + DIHH+WYG YSYGH GGVWT++LMH   DN+ YGFDPHDDSDYLTI  N  +NN
Sbjct:  220 ELKIRSSPTLIHAVRGHGGNLDIYKTLIQSWDENLLTAHILADDST---GDEPRSYIACSSEVVNENDTCDSGYAREDKGECRMDMVDSELGHMGYFASESYGITWKVRGFCEDMSNPEVFDNVNVYGDITNCDIHHMWYGMYSYGHQGGVWTDSLMHGEDDNYVYGFDPHDDSDYLTIRNNTVWNN 403          
BLAST of mRNA_H-paniculata_contig14535.2718.1 vs. uniprot
Match: A0A6H5J745_9PHAE (MEP21 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J745_9PHAE)

HSP 1 Score: 247 bits (631), Expect = 6.550e-72
Identity = 113/183 (61.75%), Postives = 143/183 (78.14%), Query Frame = 0
Query:    1 QLKISSSTKKWYRIMGHGGNIDIYDTEVRSWDVTKSMEHILKDCTSCDVGKSPRSYVLCVSEVVNPDETCDGTAQKDMGECRMDIVKSQVSYLGYDATESYGITWKVRGLCEDLSNLD-LFDSVRVYGDLQDSDIHHLWYGQYSYGHLGGVWTNNLMHDNWQYGFDPHDDSDYLTISGNECYN 182
            ++ +SSS   ++RI G GG++  Y TEV SW       H+L D    + G  PRSY+ C+SE++   +TCDG A+K+ GECRMD+++S +SYLGY+ATESYG++WKVRGLC+DLSN D LF+SVRVYGD+++SDI+ LWYG YSYGHLGGVWTNN MHDN  YGFDPHDDSDYLTI+GN CYN
Sbjct:  529 KILLSSSPTNYFRIRGAGGHLYFYQTEVTSWVEEDLAPHMLPD--DAEWGAEPRSYIGCLSEILEEGQTCDGVAKKERGECRMDVIESIISYLGYEATESYGLSWKVRGLCDDLSNKDTLFESVRVYGDIKNSDIYGLWYGHYSYGHLGGVWTNNFMHDNHVYGFDPHDDSDYLTITGNTCYN 709          
BLAST of mRNA_H-paniculata_contig14535.2718.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 224 bits (572), Expect = 5.550e-68
Identity = 108/184 (58.70%), Postives = 134/184 (72.83%), Query Frame = 0
Query:    1 QLKI-SSSTKKWYRIMGHGGNIDIYDTEVRSWDVTKSMEHILKDCTSCDVGKSPRSYVLCVSEVVNPDETCDGTAQKDMGECRMDIVKSQVSYLGYDATESYGITWKVRGLCEDLSNLDLFDSVRVYGDLQDSDIHHLWYGQYSYGHLGGVWTNNLMHDNWQYGFDPHDDSDYLTISGNECYNN 183
            +L+I S+S   ++ I GHGGN+   DT V SWDV              +  K  RS++ CVSEV+  ++TC   A  +MGECRMDI+ S++ YLGYDA+E+YGITWKVRG C DLSN D+FD V VYGD++ SDIHH++YG YS+GH GGVWTNNLMHDN QYGFDPHDDSDYL I+GN+ YNN
Sbjct:   80 ELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQ--------ETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNN 252          
BLAST of mRNA_H-paniculata_contig14535.2718.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 218 bits (556), Expect = 2.160e-62
Identity = 103/184 (55.98%), Postives = 133/184 (72.28%), Query Frame = 0
Query:    1 QLKISSS-TKKWYRIMGHGGNIDIYDTEVRSWDVTKSMEHILKDCTSCDVGKSPRSYVLCVSEVVNPDETCDGTAQKDMGECRMDIVKSQVSYLGYDATESYGITWKVRGLCEDLSNLDLFDSVRVYGDLQDSDIHHLWYGQYSYGHLGGVWTNNLMHDNWQYGFDPHDDSDYLTISGNECYNN 183
            QL+I S+ +  ++ + GHGG++   DT V SWD               +  ++ RS++ CVSE +  D+ C+G A+ +MGECRMDI+ S+++YLGY  +ESYG+TWKVRG C+DLSN ++F+   VYGDL  SDIHHL+YG YSYGH GGVWTNN MHDNWQYGFDPHDDSDYLTI+ NE YNN
Sbjct:  518 QLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQ--------ETYENGRSFLNCVSEKLTGDD-CEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNN 692          
BLAST of mRNA_H-paniculata_contig14535.2718.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI)

HSP 1 Score: 203 bits (516), Expect = 1.710e-60
Identity = 95/177 (53.67%), Postives = 124/177 (70.06%), Query Frame = 0
Query:    1 QLKISSS-TKKWYRIMGHGGNIDIYDTEVRSWDVTKSMEHILKDCTSCDVGKSPRSYVLCVSEVVNPDETCDGTAQKDMGECRMDIVKSQVSYLGYDATESYGITWKVRGLCEDLSNLDLFDSVRVYGDLQDSDIHHLWYGQYSYGHLGGVWTNNLMHDNWQYGFDPHDDSDYLTIS 176
            +L+I S+    WY + GHGG++    T V SWD               +  +  RS++ CVSE +   ETCDG A+ D GECRMDI+ S++ Y+G+   ESYG+TWKVRG C+DLSN D+F++  VYGD+++S+IHH++YG YSYGH GGVWTNN MHDN QYGFDPHDDSDYLTI+
Sbjct:   46 ELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQ--------ETYEGGRSFLNCVSEKLTG-ETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIA 213          
BLAST of mRNA_H-paniculata_contig14535.2718.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE)

HSP 1 Score: 201 bits (512), Expect = 4.930e-60
Identity = 101/193 (52.33%), Postives = 129/193 (66.84%), Query Frame = 0
Query:    1 QLKISSS-TKKWYRIMGHGGNIDIYDTEVRSWDVTKSMEHILKDCTSCDVGKSPRSYVLCVSEVVNPDETCDGTAQKDMGECRMDIVKSQVSYLGYDATESYGITWK--------VRGLCEDLSNLDLFDSVRVYGDLQDSDIHHLWYGQYSYGHLGGVWTNNLMHDNWQYGFDPHDDSDYLT--ISGNECYN 182
            QL+I S+ +  ++ + GHGG++   DT V SWD               +  +  RS++ CVSE +  D+ C+G A+ +MGECRMDI+ S+++YLGY  +ESYG+TWK        VRG C+DLSN ++FD   VYGDL  SDIHHL+YG YSYGH GGVWTNN MHDNWQYGFDPHDDSDYLT  I+   C N
Sbjct:   67 QLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQ--------ETYEGGRSFLNCVSEKLTGDD-CEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTRIIASKRCNN 250          
BLAST of mRNA_H-paniculata_contig14535.2718.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA)

HSP 1 Score: 202 bits (515), Expect = 5.680e-59
Identity = 97/185 (52.43%), Postives = 130/185 (70.27%), Query Frame = 0
Query:    1 QLKISSSTKKWYRIMGHGGNIDIYDTEVRSWDVTKSMEHILKDCTSCDVGKSPRSYVLCVSEVVNPD-ETCDGTAQKDMGECRMDIVKSQVSYLGYDATESYGITWKVRGLCEDLSNLDLFDSVRVYGDLQDSDIHHLWYGQYSYGHLGGVWTNNLMHDNWQYGFDPHDDSDYLTISGNECYNNG 184
            +L++ S++K +  +  HGG++D   T+V +WD +K+           D  K  RSY+  VSEV+    + CDG A+K+MGE RMDI  S+++YLGY  +ESYG+TWKVRGLC DLSNL++FD+V VYG++ DSDIHH ++G Y+YGH  G W  N MH N +YGFDPHDDSD+LTI  NE YNNG
Sbjct:  127 ELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNK-------VRTDDSKG-RSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNG 303          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14535.2718.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G257_ECTSI3.510e-8974.19Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D7G261_ECTSI5.310e-7763.78Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FWW1_ECTSI2.880e-7560.87Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JNF4_9PHAE1.840e-7259.36MEP16 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
A0A6H5J745_9PHAE6.550e-7261.75MEP21 protein (Fragment) n=1 Tax=Ectocarpus sp. CC... [more]
D7FRR8_ECTSI5.550e-6858.70Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D8LC73_ECTSI2.160e-6255.98Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
D7FIU4_ECTSI1.710e-6053.67Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KWQ2_9PHAE4.930e-6052.33MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A8CEP1_SACJA5.680e-5952.43Mannuronan C-5 epimerase n=1 Tax=Saccharina japoni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 194..216
e-value: 6.6
score: 15.7
coord: 170..192
e-value: 7.0
score: 15.6
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..231
e-value: 5.9E-60
score: 205.2
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 130..222
e-value: 1.4E-9
score: 38.0
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 129..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14535contigH-paniculata_contig14535:1036..5962 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14535.2718.1mRNA_H-paniculata_contig14535.2718.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14535 1036..5962 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14535.2718.1 ID=prot_H-paniculata_contig14535.2718.1|Name=mRNA_H-paniculata_contig14535.2718.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=232bp
QLKISSSTKKWYRIMGHGGNIDIYDTEVRSWDVTKSMEHILKDCTSCDVG
KSPRSYVLCVSEVVNPDETCDGTAQKDMGECRMDIVKSQVSYLGYDATES
YGITWKVRGLCEDLSNLDLFDSVRVYGDLQDSDIHHLWYGQYSYGHLGGV
WTNNLMHDNWQYGFDPHDDSDYLTISGNECYNNGNHGIIASKRCDHLLVT
DNNSYNNGGSGIMLHKSCDDSIVAGVDETRN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR012334Pectin_lyas_fold
IPR039448Beta_helix
IPR011050Pectin_lyase_fold/virulence