mRNA_H-paniculata_contig1453.2716.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1453.2716.1 vs. uniprot
Match: D7FUV0_ECTSI (RJL, Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUV0_ECTSI) HSP 1 Score: 353 bits (905), Expect = 5.890e-122 Identity = 171/202 (84.65%), Postives = 183/202 (90.59%), Query Frame = 1 Query: 16 SARWIGTGVRRKSKGVEDLYTSRARDAPQKKLWCVRVKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVNGQSVRINFWDLSGHPDFFEIRNEFYKDSQGAILVYDVANRATFDELGQWLQEAANFGAGGMPVAVCGNKIDKRRVVSEEEGARWAADHGCKYFETSANSGANVTAVFMKLFELALAQMNSP 621 +ARW G+RRKSKGV+DLYTSRAR+APQKKLWCVR+KIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVNG+SVRINFWDLSGHPDFFEIRNEFYKDSQGA+LVYDVANRA+F+EL QWL EAA+FGAGG+P+AVC NKIDKRRVVSEEEG RWA DHG YFETSA SG NV A F LFE ALAQM P Sbjct: 5 TARWPSGGMRRKSKGVDDLYTSRAREAPQKKLWCVRMKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVNGESVRINFWDLSGHPDFFEIRNEFYKDSQGAVLVYDVANRASFEELEQWLVEAADFGAGGIPMAVCANKIDKRRVVSEEEGQRWAKDHGFTYFETSACSGVNVGASFSNLFEKALAQMKDP 206
BLAST of mRNA_H-paniculata_contig1453.2716.1 vs. uniprot
Match: A0A836CR06_9STRA (RJL, ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR06_9STRA) HSP 1 Score: 308 bits (790), Expect = 2.300e-104 Identity = 144/192 (75.00%), Postives = 165/192 (85.94%), Query Frame = 1 Query: 37 GVRRKSKGVEDLYTSRARDAPQKKLWCVRVKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVNGQSVRINFWDLSGHPDFFEIRNEFYKDSQGAILVYDVANRATFDELGQWLQEAANFGAGGMPVAVCGNKIDKRRVVSEEEGARWAADHGCKYFETSANSGANVTAVFMKLFELALAQM 612 G RR+S+G++DLYT+RA +APQKK WCVR+KIISMG+L GKSCLIKRFCEERFV+KYISTIGIDYGVKPVTV GQ VR+NFWDLSGHPDFFEIRNEFYKDSQGA+LV+DV+ R +F+EL WL EAA FGA GMPV VC NK+DK+R V+EEEG RWA + G YFETSANSGANV AVF +LFE A +M Sbjct: 15 GGRRRSRGIDDLYTTRAAEAPQKKHWCVRIKIISMGSLATGKSCLIKRFCEERFVTKYISTIGIDYGVKPVTVRGQQVRVNFWDLSGHPDFFEIRNEFYKDSQGALLVFDVSRRESFEELQDWLSEAAKFGAQGMPVVVCANKVDKKRAVTEEEGQRWARERGYPYFETSANSGANVAAVFGRLFEAAFDKM 206
BLAST of mRNA_H-paniculata_contig1453.2716.1 vs. uniprot
Match: A0A485LT00_9STRA (Aste57867_25121 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LT00_9STRA) HSP 1 Score: 236 bits (602), Expect = 4.900e-76 Identity = 108/165 (65.45%), Postives = 133/165 (80.61%), Query Frame = 1 Query: 118 VRVKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVNGQSVRINFWDLSGHPDFFEIRNEFYKDSQGAILVYDVANRATFDELGQWLQEAANFGAGGMPVAVCGNKIDKRRVVSEEEGARWAADHGCKYFETSANSGANVTAVFMKLFELALAQM 612 +R+K+ISMG GVGKSCLIKR+CEE+FVSKYISTIGIDYGVKPV +NG VR+NFWDLSG P+F E+RNEFYKD+QGAIL++DV++R TFD L WL+EAA +G G P VC NK+DK RVVSE+EGA WA+ G +YFETSA +GANV LF+L + ++ Sbjct: 28 LRIKVISMGDGGVGKSCLIKRYCEEKFVSKYISTIGIDYGVKPVKINGTEVRVNFWDLSGQPEFLEVRNEFYKDTQGAILIFDVSSRRTFDALESWLKEAAKYGGGKFPCVVCANKMDKTRVVSEDEGAAWASAKGYEYFETSAQTGANVAEALHCLFQLVVQRV 192
BLAST of mRNA_H-paniculata_contig1453.2716.1 vs. uniprot
Match: W4GE15_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GE15_9STRA) HSP 1 Score: 231 bits (590), Expect = 3.150e-74 Identity = 104/165 (63.03%), Postives = 131/165 (79.39%), Query Frame = 1 Query: 118 VRVKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVNGQSVRINFWDLSGHPDFFEIRNEFYKDSQGAILVYDVANRATFDELGQWLQEAANFGAGGMPVAVCGNKIDKRRVVSEEEGARWAADHGCKYFETSANSGANVTAVFMKLFELALAQM 612 +R+K+ISMG GVGKSC+IKR+CEE+FV+KYISTIGIDYGVKPV +NG VR+NFWDLSG P+F E+RNEFYKD+QG IL++DV++R TFD L WL+EAA +G G P VCGNK+DK R+V E+E A WA+ G +YFETSA +GANV LF L +A++ Sbjct: 27 LRIKVISMGDGGVGKSCVIKRYCEEKFVTKYISTIGIDYGVKPVKINGSEVRVNFWDLSGQPEFLEVRNEFYKDTQGGILMFDVSSRRTFDGLDGWLKEAAKYGGGKFPCVVCGNKVDKLRLVKEDEAAAWASSKGYEYFETSAQTGANVAEALHHLFHLVVARV 191
BLAST of mRNA_H-paniculata_contig1453.2716.1 vs. uniprot
Match: A0A024TXM7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TXM7_9STRA) HSP 1 Score: 231 bits (589), Expect = 4.190e-74 Identity = 105/165 (63.64%), Postives = 132/165 (80.00%), Query Frame = 1 Query: 118 VRVKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVNGQSVRINFWDLSGHPDFFEIRNEFYKDSQGAILVYDVANRATFDELGQWLQEAANFGAGGMPVAVCGNKIDKRRVVSEEEGARWAADHGCKYFETSANSGANVTAVFMKLFELALAQM 612 +R+K+ISMG GVGKSC+IKR+CEE+FVSKYISTIGIDYGVKPV VNG VR+NFWDLSG P+F E+RNEFYKD+QGAIL++DV++R +F+ L WL+EAA +G G P VC NK+DK R+V E+EGA WAA G +YFETSA +GANV LF+L + ++ Sbjct: 25 LRIKVISMGDGGVGKSCVIKRYCEEKFVSKYISTIGIDYGVKPVKVNGSEVRVNFWDLSGQPEFLEVRNEFYKDTQGAILMFDVSSRRSFEALDGWLKEAAKYGGGKFPCVVCANKVDKLRLVKEDEGAAWAAAKGYEYFETSAQTGANVAEALHHLFQLVVNRL 189
BLAST of mRNA_H-paniculata_contig1453.2716.1 vs. uniprot
Match: A0A6G0W5R8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W5R8_9STRA) HSP 1 Score: 231 bits (588), Expect = 4.870e-74 Identity = 105/165 (63.64%), Postives = 131/165 (79.39%), Query Frame = 1 Query: 118 VRVKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVNGQSVRINFWDLSGHPDFFEIRNEFYKDSQGAILVYDVANRATFDELGQWLQEAANFGAGGMPVAVCGNKIDKRRVVSEEEGARWAADHGCKYFETSANSGANVTAVFMKLFELALAQM 612 +R+K+ISMG GVGKSC IKR+CEE+FVSKYISTIGIDYGVKPV +NG VR+NFWDLSG P+F E+RNEFYKD+QG IL++DV++R +FD L WL+E+A +G G P VCGNKIDK RVV E+E A WAA G +YFETSA +GANV+ LF+L + ++ Sbjct: 19 LRIKVISMGEGGVGKSCFIKRYCEEKFVSKYISTIGIDYGVKPVKMNGLEVRVNFWDLSGQPEFLEVRNEFYKDTQGGILMFDVSSRRSFDALDSWLKESAKYGGGKFPCVVCGNKIDKLRVVKEDEAAAWAASKGYEYFETSAQTGANVSEALHCLFQLVVNRL 183
BLAST of mRNA_H-paniculata_contig1453.2716.1 vs. uniprot
Match: A0A7S1CBJ8_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBJ8_9STRA) HSP 1 Score: 231 bits (588), Expect = 1.040e-73 Identity = 104/168 (61.90%), Postives = 130/168 (77.38%), Query Frame = 1 Query: 118 VRVKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVNGQSVRINFWDLSGHPDFFEIRNEFYKDSQGAILVYDVANRATFDELGQWLQEAANFGAGGMPVAVCGNKIDKRRVVSEEEGARWAADHGCKYFETSANSGANVTAVFMKLFELALAQMNSP 621 +R+K++SMG G GKSCLIKRFCE +FVS+YISTIG+D+GVKPVT+ G V++NFWDLSGHP+FFEIRNEFY+D+QG IL YDV NRA+FD LG WL+EA+ +GA V NK+DK+RVVS EG WA + G +YFETSANSG NV +F LF+ A++ P Sbjct: 9 IRIKVVSMGDGGTGKSCLIKRFCEGKFVSRYISTIGVDFGVKPVTIAGCRVKVNFWDLSGHPEFFEIRNEFYRDTQGVILTYDVTNRASFDALGDWLEEASKYGAPSFVAFVAANKVDKKRVVSTAEGRAWAEERGLQYFETSANSGQNVDDMFNTLFKTVFAKIERP 176
BLAST of mRNA_H-paniculata_contig1453.2716.1 vs. uniprot
Match: A0A812YQF8_SYMMI (Dnajc27 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YQF8_SYMMI) HSP 1 Score: 228 bits (582), Expect = 4.690e-73 Identity = 105/160 (65.62%), Postives = 129/160 (80.62%), Query Frame = 1 Query: 121 RVKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVNGQSVRINFWDLSGHPDFFEIRNEFYKDSQGAILVYDVANRATFDELGQWLQEAANFGAG--GMPVAVCGNKIDKRRVVSEEEGARWAADHGCKYFETSANSGANVTAVFMKLFE 594 R+KI++MG GKSCL+KR+CEERF+SKYI+TIG+DYGVKPV ++G SVR+NFWDLSGH +FFEIRNEFYKD+QG ILVYDV+ R TF EL WL EA FGA G+PV +C NK+DKRRVVSE+EG ++A YFE SA+SGANVT +F +LF+ Sbjct: 21 RIKILTMGGGNTGKSCLVKRYCEERFISKYIATIGVDYGVKPVQIDGVSVRVNFWDLSGHQEFFEIRNEFYKDAQGIILVYDVSTRETFQELDTWLNEAKKFGANIPGIPVVLCANKVDKRRVVSEDEGRQYATSKNFSYFEASASSGANVTEMFEQLFQ 180
BLAST of mRNA_H-paniculata_contig1453.2716.1 vs. uniprot
Match: A0A8K1CFS0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CFS0_PYTOL) HSP 1 Score: 227 bits (579), Expect = 7.370e-73 Identity = 105/164 (64.02%), Postives = 129/164 (78.66%), Query Frame = 1 Query: 121 RVKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVNGQSVRINFWDLSGHPDFFEIRNEFYKDSQGAILVYDVANRATFDELGQWLQEAANFGAGGMPVAVCGNKIDKRRVVSEEEGARWAADHGCKYFETSANSGANVTAVFMKLFELALAQM 612 R+KIISMG GVGKSC+IKRFCEE+FVSKYISTIGIDYGVKPVTV GQ VR+NFWDLSG P+F E+RNEFYKD+QG IL++DV +R +F+ + WL+EAA FGAG P +CGNK+D+ RVVSE+E +A G +Y+ETSA +G N+ FM LF + QM Sbjct: 7 RIKIISMGESGVGKSCVIKRFCEEKFVSKYISTIGIDYGVKPVTVLGQEVRVNFWDLSGLPEFLEVRNEFYKDTQGGILMFDVTSRKSFEAVDAWLREAAKFGAGRFPCVLCGNKVDRHRVVSEDEARAYARTKGFEYYETSACTGINIADAFMSLFTQVVRQM 170
BLAST of mRNA_H-paniculata_contig1453.2716.1 vs. uniprot
Match: A0A067C8I9_SAPPC (Uncharacterized protein (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C8I9_SAPPC) HSP 1 Score: 228 bits (580), Expect = 1.010e-72 Identity = 105/167 (62.87%), Postives = 129/167 (77.25%), Query Frame = 1 Query: 91 DAPQKKLWCVRVKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVNGQSVRINFWDLSGHPDFFEIRNEFYKDSQGAILVYDVANRATFDELGQWLQEAANFGAGGMPVAVCGNKIDKRRVVSEEEGARWAADHGCKYFETSANSGANVTAVFMKLF 591 DAP +R+K+ISMG GVGKSC+IKR+CEE+FV+KYISTIGIDYGVKPV + G VR+NFWDLSG P+F E+RNEFYKD+QG IL++DV++R +F+ L WL+EAA FG G P VCGNKIDK RVVSE+EG WA G +Y+ETSA +GAN+ F LF Sbjct: 17 DAPTSAPPVLRIKVISMGDGGVGKSCVIKRYCEEKFVAKYISTIGIDYGVKPVRIGGAEVRVNFWDLSGQPEFLEVRNEFYKDTQGGILLFDVSSRRSFEGLDAWLKEAAKFGGGKFPCVVCGNKIDKIRVVSEDEGMAWARARGYEYYETSAQTGANIADAFHSLF 183 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1453.2716.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1453.2716.1 >prot_H-paniculata_contig1453.2716.1 ID=prot_H-paniculata_contig1453.2716.1|Name=mRNA_H-paniculata_contig1453.2716.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=217bp MSVGSSARWIGTGVRRKSKGVEDLYTSRARDAPQKKLWCVRVKIISMGALback to top mRNA from alignment at H-paniculata_contig1453:18938..23315- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1453.2716.1 ID=mRNA_H-paniculata_contig1453.2716.1|Name=mRNA_H-paniculata_contig1453.2716.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4378bp|location=Sequence derived from alignment at H-paniculata_contig1453:18938..23315- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1453:18938..23315- >mRNA_H-paniculata_contig1453.2716.1 ID=mRNA_H-paniculata_contig1453.2716.1|Name=mRNA_H-paniculata_contig1453.2716.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1302bp|location=Sequence derived from alignment at H-paniculata_contig1453:18938..23315- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |