mRNA_H-paniculata_contig1453.2715.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1453.2715.1 vs. uniprot
Match: D7FUU8_ECTSI (PCI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUU8_ECTSI) HSP 1 Score: 291 bits (744), Expect = 1.760e-90 Identity = 157/220 (71.36%), Postives = 184/220 (83.64%), Query Frame = 2 Query: 806 MSNVQALSGTPHEPNLRLLELFAYGTYAQAMSKAKELPKLTPVQVEKLRMLSVVSLAHKNKVVPYSTIKTDLGMDNVRHLEDLIFDTMYSGMLQGKLDQREEVLKVKYAMARDVRLDDLGVMIEKLGNWASTTQVLLATLEGSVEEAAVARKQEEVKAESLRAEAAEMKKNIGESGGKMRDDDGYEGMGFDMETDRPHIRRGRSKRNRASGLGDYRPRNK 1465 M NVQAL+GTPHEP+LRLLE FAYGTY A +KA +LPKLT QV+KLRMLSVVSLAH +K+VPY+ +KT LG+DN+R LED+IFDTMY+G+LQGKLDQR+ VLKVKYAMARDVR+D+L MI+KLG+WASTTQVLL TLEGSV +AA +RK E AESL AEAAE+KKN ES GK RDDDG+ +GFDME +RRGRSKRNRA G+ D+RPRNK Sbjct: 1 MPNVQALAGTPHEPHLRLLETFAYGTYTDAQAKADQLPKLTGAQVDKLRMLSVVSLAHTSKLVPYAAMKTALGIDNIRRLEDVIFDTMYAGLLQGKLDQRQAVLKVKYAMARDVRVDELTTMIDKLGSWASTTQVLLETLEGSVTQAAESRKSEAQIAESLAAEAAEVKKNFSESTGKQRDDDGFHDVGFDMEDRSGGMRRGRSKRNRA-GM-DFRPRNK 218
BLAST of mRNA_H-paniculata_contig1453.2715.1 vs. uniprot
Match: A0A7S2CC19_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CC19_9STRA) HSP 1 Score: 193 bits (491), Expect = 5.690e-53 Identity = 119/255 (46.67%), Postives = 161/255 (63.14%), Query Frame = 2 Query: 680 MADEG--LVQFLVLAKGAKGAACAALIQQVLNNKKIFVFGELLAMSNVQALSGTPHEPNLRLLELFAYGTYAQAMSKAKELPKLTPVQVEKLRMLSVVSLAHKNKVVPYSTIKTDLGMDNVRHLEDLIFDTMYSGMLQGKLDQREEVLKVKYAMARDVRLDDLGVMIEKLGNWASTTQVLLATLEGSVEEAAVARKQEEVKAE-SLRAEAAEMKKNIGESGGKMRDDDGYEGMGFDMETDRPHIR-RGRSKRNRA 1432 MA+ G L QF +LAK AK A LI+Q L N+KIFVFGELL M N+QAL T H LRLLELFAYGTY+Q +++ + P + Q EKLR LS+VSLAH K VPY ++ +L ++NVR LEDLI DT+Y+G++ GK+DQ VLKVK A+ RDV+ +D+ MI KL +W +L T+ S AA A + E KA+ ++ E ++KKN+ + + G G +M+ DRP+ R R KR+R Sbjct: 2 MAEGGAALEQFCLLAKTAKSRAAVELIKQALTNRKIFVFGELLFMDNMQALRDTEHAEYLRLLELFAYGTYSQYLAQRDQYPDMNAAQTEKLRQLSIVSLAHTQKKVPYEVLQAELAINNVRELEDLIIDTIYTGLVTGKMDQTTGVLKVKSAVPRDVKPEDVDAMISKLTDWRDKCDAILKTMAASQAHAA-AERDEHAKAKLAVAEEIDDVKKNLKDRLPTDLREGGSRYAGDEMDVDRPNRRLASRGKRSRV 255
BLAST of mRNA_H-paniculata_contig1453.2715.1 vs. uniprot
Match: A0A3F2RJW9_9STRA (PCI domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJW9_9STRA) HSP 1 Score: 190 bits (482), Expect = 9.600e-52 Identity = 106/223 (47.53%), Postives = 147/223 (65.92%), Query Frame = 2 Query: 695 LVQFLVLAKGAKGAACAALIQQVLNNKKIFVFGELLAMSNVQALSGTPHEPNLRLLELFAYGTYAQAMSKAKELPKLTPVQVEKLRMLSVVSLAHKNKVVPYSTIKTDLGMDNVRHLEDLIFDTMYSGMLQGKLDQREEVLKVKYAMARDVRLDDLGVMIEKLGNWASTTQVLLATLEGSVEEAAVARKQEEVKAESLR----AEAAEMKKNIGESGGKMRDD 1351 L QF +LAK A+G AC ALIQQVL+NKK+FVF ELL M NV+AL + + + LL +F +GTY++ + +ELP+LTP QV KLR L+ VSLAH+ K +PY+T+ DLG+ +VR +ED++ DT+YSG+LQGKLDQ+ VKYA+ RD D+ MIEKL NW + + + + + A + E V+ ES+R A A+E K + G SG R+D Sbjct: 11 LEQFTLLAKNARGRACVALIQQVLSNKKLFVFRELLDMPNVEALKDSEYSGHYELLRIFCFGTYSEYAAHKEELPELTPQQVNKLRKLTAVSLAHRYKNIPYNTLMQDLGVSSVREVEDILIDTIYSGLLQGKLDQKSSCFAVKYAVGRDTHHADIDSMIEKLTNWKAKSTEINEKINTILRMAEKREEDERVREESIRNKMAARASERKSSAG-SGPNFRED 232
BLAST of mRNA_H-paniculata_contig1453.2715.1 vs. uniprot
Match: A0A7S2UVG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVG8_9STRA) HSP 1 Score: 187 bits (475), Expect = 1.870e-51 Identity = 101/190 (53.16%), Postives = 134/190 (70.53%), Query Frame = 2 Query: 695 LVQFLVLAKGAKGAACAALIQQVLNNKKIFVFGELLAMSNVQALSGTPHEPNLRLLELFAYGTYAQAMSKAKELPKLTPVQVEKLRMLSVVSLAHKNKVVPYSTIKTDLGMDNVRHLEDLIFDTMYSGMLQGKLDQREEVLKVKYAMARDVRLDDLGVMIEKLGNWASTTQVLLATLEGSVEEAAVARKQ 1264 L +F++LAK AKG AC ALIQQVLNN ++FVFGELLA NVQAL+GT HE +LRLLELFAYGTY+ LP+LTP Q KLR LS+VSLA +KV+ Y + +L ++NVR LEDL+ +T+Y G++ GKLDQ VLKV ARDVR ++ ++ +L +W+ TQ L+ L G+ E V+++Q Sbjct: 11 LERFVILAKNAKGRACVALIQQVLNNNRVFVFGELLASPNVQALAGTEHELHLRLLELFAYGTYSDYHENRSSLPELTPAQRTKLRQLSLVSLASASKVLRYEELMKELQLENVRELEDLVIETIYVGLVLGKLDQLGGVLKVSAVGARDVRPSEVPHLLHRLQHWSQVTQALVQEL-GTCAETVVSKRQ 199
BLAST of mRNA_H-paniculata_contig1453.2715.1 vs. uniprot
Match: A0A835YQX8_9STRA (PCI domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQX8_9STRA) HSP 1 Score: 186 bits (472), Expect = 4.700e-51 Identity = 102/194 (52.58%), Postives = 131/194 (67.53%), Query Frame = 2 Query: 692 GLVQFLVLAKGAKGAACAALIQQVLNNKKIFVFGELLAMSNVQALSGTPHEPNLRLLELFAYGTYAQAMSKAKELPKLTPVQVEKLRMLSVVSLAHKNKVVPYSTIKTDLGMDNVRHLEDLIFDTMYSGMLQGKLDQREEVLKVKYAMARDVRLDDLGVMIEKLGNWASTTQVLLATLEGSVEEAAVARKQEEV 1273 GL Q+ +LAK AKG AC ALIQ+V+ +KKIFVFGELLAM NVQ L GT HEP LRLLELFAYG Y + LP+L+ EKLRML+VV+LA+ ++VVPY ++ LG+ +VR +ED++ D MY+G+LQ +LDQR L+V++ RDVR +++ MI L WA T L L V A A K EEV Sbjct: 9 GLEQYCLLAKTAKGRACVALIQKVMADKKIFVFGELLAMPNVQGLRGTEHEPYLRLLELFAYGVYGDHKAAGGALPQLSDAMTEKLRMLTVVALANTSRVVPYGKLQEALGVSSVRVVEDVVLDAMYAGLLQCRLDQRAGTLRVQHVTPRDVRPEEIDSMIATLDMWAGATDRALRGLRKGVNSAKAAWKAEEV 202
BLAST of mRNA_H-paniculata_contig1453.2715.1 vs. uniprot
Match: V9EG37_PHYPR (PCI domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=V9EG37_PHYPR) HSP 1 Score: 187 bits (475), Expect = 1.030e-50 Identity = 92/167 (55.09%), Postives = 122/167 (73.05%), Query Frame = 2 Query: 692 GLVQFLVLAKGAKGAACAALIQQVLNNKKIFVFGELLAMSNVQALSGTPHEPNLRLLELFAYGTYAQAMSKAKELPKLTPVQVEKLRMLSVVSLAHKNKVVPYSTIKTDLGMDNVRHLEDLIFDTMYSGMLQGKLDQREEVLKVKYAMARDVRLDDLGVMIEKLGNW 1192 GL QF +LAK A+G AC ALIQQVL+NKK+FVF ELL M NV+AL + H + LL +F++GTY +++ ELP LTP Q+ KLR L+VVSLAH+ K +PY T+ DLG+ VR +ED++ DT+YSG++QGKLDQ+ VKYA+ RD R +D+ MI+KL NW Sbjct: 10 GLEQFTLLAKNARGRACVALIQQVLSNKKLFVFRELLDMPNVEALKDSEHMEHYELLRIFSFGTYNDYLARKDELPDLTPQQMNKLRKLTVVSLAHRFKNIPYDTLIQDLGVSTVREVEDILIDTIYSGLVQGKLDQKSRCFVVKYAVGRDTRHEDIDDMIQKLSNW 176
BLAST of mRNA_H-paniculata_contig1453.2715.1 vs. uniprot
Match: H3GNV0_PHYRM (PCI domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=H3GNV0_PHYRM) HSP 1 Score: 186 bits (472), Expect = 2.740e-50 Identity = 107/254 (42.13%), Postives = 154/254 (60.63%), Query Frame = 2 Query: 695 LVQFLVLAKGAKGAACAALIQQVLNNKKIFVFGELLAMSNVQALSGTPHEPNLRLLELFAYGTYAQAMSKAKELPKLTPVQVEKLRMLSVVSLAHKNKVVPYSTIKTDLGMDNVRHLEDLIFDTMYSGMLQGKLDQREEVLKVKYAMARDVRLDDLGVMIEKLGNWASTTQVLLATLEGSVEEAAVARKQEEVKAESLRAEAA----EMKKNIGESGGKMRDDDGYEGMGFDMETDRPHIRRGRSKRNRASGLG 1444 L QF +LAK A+G AC ALIQQVL+NKK+FVF ELL M NV+AL G+ + + LL +F +GTY +++ ELP+LTP QV KL+ L+ VSLAH+ K +PY T+ DLG+ VR +ED++ DT+YSG++QGKLDQ+ VKYA+ RD +D+ MI+KL NW + + + + + A + E + E +R + A E K +GG +R G F++ +D RRG + R +G Sbjct: 11 LEQFTLLAKNARGRACVALIQQVLSNKKLFVFRELLDMDNVEALRGSEYTEHYELLRIFCFGTYNDYVARKNELPELTPQQVNKLKKLTTVSLAHRFKNIPYDTLMQDLGVSTVREVEDILIDTIYSGLIQGKLDQKSRCFVVKYAVGRDTHHEDIDDMIQKLTNWKAQSADICEKINSILNLAEKQEEDERTREEGIRTKMASRTSERGKGFASAGGNVRP-----GEDFNLYSD-AGPRRGAPSKQRMHSMG 258
BLAST of mRNA_H-paniculata_contig1453.2715.1 vs. uniprot
Match: A0A4D9D7R0_9STRA (PCI domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7R0_9STRA) HSP 1 Score: 186 bits (473), Expect = 2.980e-50 Identity = 96/184 (52.17%), Postives = 134/184 (72.83%), Query Frame = 2 Query: 695 LVQFLVLAKGAKGAACAALIQQVLNNKKIFVFGELLAMSNVQALSGTPHEPNLRLLELFAYGTYAQAMSKAKELPKLTPVQVEKLRMLSVVSLAHKNKVVPYSTIKTDLGMD-NVRHLEDLIFDTMYSGMLQGKLDQREEVLKVKYAMARDVRLDDLGVMIEKLGNWASTTQVLLATLEGSVEE 1243 L QF +LAK AKG AC ALIQQVL+ +KI VFGELLAM N++AL G+ HEP LRLLE+FAYGTYA + LP LTP Q+ KL+ L++V+LA K++ +PY+ + +L +D +VR LEDLI +++Y G+L G+LDQR + ++K A+ RDVRL+D+ M++KL W + + LL +LE + E Sbjct: 10 LEQFTILAKSAKGNACVALIQQVLSTRKIVVFGELLAMPNLEALRGSEHEPYLRLLEIFAYGTYADYQRQRGTLPPLTPPQLRKLQQLTLVTLAQKHESIPYAVLFRELDIDGDVRELEDLIIESIYMGVLTGRLDQRGGLFRIKGAIGRDVRLEDIDGMMDKLQKWVANAETLLTSLEQRMSE 193
BLAST of mRNA_H-paniculata_contig1453.2715.1 vs. uniprot
Match: F0YEG3_AURAN (PCI domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEG3_AURAN) HSP 1 Score: 182 bits (462), Expect = 1.160e-49 Identity = 97/186 (52.15%), Postives = 130/186 (69.89%), Query Frame = 2 Query: 680 MADEG---LVQFLVLAKGAKGAACAALIQQVLNNKKIFVFGELLAMSNVQALSGTPHEPNLRLLELFAYGTYAQAMSKAKELPKLTPVQVEKLRMLSVVSLAHKNKVVPYSTIKTDLGMDNVRHLEDLIFDTMYSGMLQGKLDQREEVLKVKYAMARDVRLDDLGVMIEKLGNWASTTQVLLATLE 1228 MA++G L QF +LAK AKG A +IQQ L++K+I+VFGELLAM +VQAL GT H P+L LLE+FA+GTY +K +P LTP Q+ KLR LS+VSLA ++ VV Y+T++ +L +DNVR LED I +T+Y+G+L GK+DQ +V A RDV+LD +G + KL WA+T L A LE Sbjct: 1 MAEDGSQALEQFCLLAKSAKGRAVVGIIQQTLSSKRIYVFGELLAMPSVQALRGTEHAPHLDLLEIFAFGTYGDYRAKGDAMPPLTPAQLTKLRQLSLVSLARESAVVAYATMQEELAVDNVRDLEDAIIETIYAGLLSGKMDQMSAEFRVAKAAGRDVKLDAVGDLAAKLEAWAATAGQLSAELE 186
BLAST of mRNA_H-paniculata_contig1453.2715.1 vs. uniprot
Match: A0A7S2RP08_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RP08_9STRA) HSP 1 Score: 185 bits (469), Expect = 1.230e-49 Identity = 100/207 (48.31%), Postives = 141/207 (68.12%), Query Frame = 2 Query: 701 QFLVLAKGAKGAACAALIQQVLNNKKIFVFGELLAMSNVQALSGTPHEPNLRLLELFAYGTYAQAMSKAKELPKLTPVQVEKLRMLSVVSLAHKNKVVPYSTIKTDLGMDNVRHLEDLIFDTMYSGMLQGKLDQREEVLKVKYAMARDVRLDDLGVMIEKLGNWASTTQVLLATLEGSVEEAAVARKQEEVKAESLRAEAAEMKKNI 1321 +F +LAK +G A ALI+Q L++KK+FV GELLAM N+QAL GT E +LRLLELFAYGTY++ + +LP+L EKLR LS+VSLAH K V Y+ ++ +L + NVR LEDLI DT+Y+G++ GKLDQ +L V+ A+ARDVR +++G MI+KL W S + L+A L+ ++ AR+ E + +RA+ E K + Sbjct: 29 RFCLLAKSQRGRAVVALIEQALSSKKVFVVGELLAMDNIQALRGTEFEAHLRLLELFAYGTYSEYQAAKDQLPELNSNMKEKLRALSIVSLAHTKKQVTYTELQQELAITNVRELEDLIIDTIYAGLVDGKLDQANGMLNVRSAVARDVRPEEVGEMIQKLTQWGSDMEQLIAALDKNMAHVNEARQGETKLRQEVRAKVEETTKKL 235 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1453.2715.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1453.2715.1 >prot_H-paniculata_contig1453.2715.1 ID=prot_H-paniculata_contig1453.2715.1|Name=mRNA_H-paniculata_contig1453.2715.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=263bp MADEGLVQFLVLAKGAKGAACAALIQQVLNNKKIFVFGELLAMSNVQALSback to top mRNA from alignment at H-paniculata_contig1453:9936..18414+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1453.2715.1 ID=mRNA_H-paniculata_contig1453.2715.1|Name=mRNA_H-paniculata_contig1453.2715.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8479bp|location=Sequence derived from alignment at H-paniculata_contig1453:9936..18414+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1453:9936..18414+ >mRNA_H-paniculata_contig1453.2715.1 ID=mRNA_H-paniculata_contig1453.2715.1|Name=mRNA_H-paniculata_contig1453.2715.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1578bp|location=Sequence derived from alignment at H-paniculata_contig1453:9936..18414+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |