prot_H-paniculata_contig14521.2709.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14521.2709.1
Unique Nameprot_H-paniculata_contig14521.2709.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length74
Homology
BLAST of mRNA_H-paniculata_contig14521.2709.1 vs. uniprot
Match: D7G4N5_ECTSI (3'-5'-exoribonuclease/ RNA binding n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4N5_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 1.900e-40
Identity = 67/70 (95.71%), Postives = 69/70 (98.57%), Query Frame = 0
Query:    1 RNSPLSVEIARVIEIGVRDSQALDTEALCILGGEKVWQLRCDVHILDHGGNLIDASTIATMAALRHFRRP 70
            RNSPLSVEIARVIEIGVRDSQALDTEALCI+GGEKVWQLRCDVHILDHGGNLIDA T+ATMAALRHFRRP
Sbjct:   99 RNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACTLATMAALRHFRRP 168          
BLAST of mRNA_H-paniculata_contig14521.2709.1 vs. uniprot
Match: A0A6H5KDM4_9PHAE (RNase_PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDM4_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 2.800e-32
Identity = 64/70 (91.43%), Postives = 66/70 (94.29%), Query Frame = 0
Query:    1 RNSPLSVEIARVIEIGVRDSQALDTEALCILGGEKVWQLRCDVHILDHGGNLIDASTIATMAALRHFRRP 70
            RNSPLSVEIARVIEIGVRDSQALDTEALCI+GGEK   LRCDVHILDHGGNLIDA T+ATMAALRHFRRP
Sbjct:   99 RNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEK---LRCDVHILDHGGNLIDACTLATMAALRHFRRP 165          
BLAST of mRNA_H-paniculata_contig14521.2709.1 vs. uniprot
Match: A0A835ZEC1_9STRA (Ribosomal protein S5 domain 2-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEC1_9STRA)

HSP 1 Score: 111 bits (277), Expect = 5.000e-27
Identity = 51/70 (72.86%), Postives = 61/70 (87.14%), Query Frame = 0
Query:    1 RNSPLSVEIARVIEIGVRDSQALDTEALCILGGEKVWQLRCDVHILDHGGNLIDASTIATMAALRHFRRP 70
            R SPL+ EI R+IE G+RDSQALDTE LCI+ GEKVWQLR DVHILD+GGNL+DA+ +A +AAL+HFRRP
Sbjct:  100 RASPLATEITRIIERGIRDSQALDTETLCIVAGEKVWQLRVDVHILDNGGNLVDAAALAAIAALQHFRRP 169          
BLAST of mRNA_H-paniculata_contig14521.2709.1 vs. uniprot
Match: A0A662Y5E3_9STRA (RNase_PH domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y5E3_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 2.070e-23
Identity = 41/69 (59.42%), Postives = 58/69 (84.06%), Query Frame = 0
Query:    2 NSPLSVEIARVIEIGVRDSQALDTEALCILGGEKVWQLRCDVHILDHGGNLIDASTIATMAALRHFRRP 70
            +S  + E+AR++E GVR+S+ALDTEAL ++ GEKVW + C VH+LDHGGNL+DA+++A +AAL H+RRP
Sbjct:  111 SSVAAAELARLVERGVRESRALDTEALAVVAGEKVWAITCHVHVLDHGGNLVDAASLAAIAALMHYRRP 179          
BLAST of mRNA_H-paniculata_contig14521.2709.1 vs. uniprot
Match: A0A8K1C7Y8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7Y8_PYTOL)

HSP 1 Score: 99.4 bits (246), Expect = 9.450e-23
Identity = 41/70 (58.57%), Postives = 59/70 (84.29%), Query Frame = 0
Query:    1 RNSPLSVEIARVIEIGVRDSQALDTEALCILGGEKVWQLRCDVHILDHGGNLIDASTIATMAALRHFRRP 70
            R SPL+VE+AR+++ G+R+ +ALDTEAL I+ GEKVW + C++H++DHGGNLID  ++A +AA+ HFRRP
Sbjct:  102 RPSPLAVELARIVDRGIRECRALDTEALAIVAGEKVWSITCNIHVVDHGGNLIDCVSLAAIAAMMHFRRP 171          
BLAST of mRNA_H-paniculata_contig14521.2709.1 vs. uniprot
Match: A0A2P6N4M7_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N4M7_9EUKA)

HSP 1 Score: 97.1 bits (240), Expect = 1.170e-22
Identity = 42/70 (60.00%), Postives = 57/70 (81.43%), Query Frame = 0
Query:    1 RNSPLSVEIARVIEIGVRDSQALDTEALCILGGEKVWQLRCDVHILDHGGNLIDASTIATMAALRHFRRP 70
            + S   +E+ RV+E G+R+S+A+D+EALCI+  EKVW +RCD+HILDH GNL D ++IAT+AAL HFRRP
Sbjct:  101 KQSDQFIELGRVVERGLRESRAIDSEALCIIASEKVWSVRCDIHILDHVGNLTDCASIATIAALMHFRRP 170          
BLAST of mRNA_H-paniculata_contig14521.2709.1 vs. uniprot
Match: A0A7S1CIZ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CIZ9_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.230e-22
Identity = 42/69 (60.87%), Postives = 58/69 (84.06%), Query Frame = 0
Query:    1 RNSPLSVEIARVIEIGVRDSQALDTEALCILGGEKVWQLRCDVHILDHGGNLIDASTIATMAALRHFRR 69
            R SPL+VEI R++E  +RD++A+DTEALCI+ GEKVW LRCDV ++D GGN+IDA+ ++ +A+L HFRR
Sbjct:   93 RPSPLAVEIGRIVERCLRDARAIDTEALCIVAGEKVWSLRCDVRVVDDGGNIIDAAALSAVASLCHFRR 161          
BLAST of mRNA_H-paniculata_contig14521.2709.1 vs. uniprot
Match: K3X4Z2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4Z2_GLOUD)

HSP 1 Score: 97.4 bits (241), Expect = 4.920e-22
Identity = 39/70 (55.71%), Postives = 59/70 (84.29%), Query Frame = 0
Query:    1 RNSPLSVEIARVIEIGVRDSQALDTEALCILGGEKVWQLRCDVHILDHGGNLIDASTIATMAALRHFRRP 70
            R SP++VE+AR+++ G+R+ +ALDTEAL I+ GEKVW + C++H++DHGGNLID  ++A +AA+ H+RRP
Sbjct:  102 RPSPMAVELARIVDRGIRECRALDTEALAIIAGEKVWAITCNIHVVDHGGNLIDCVSLAAIAAMMHYRRP 171          
BLAST of mRNA_H-paniculata_contig14521.2709.1 vs. uniprot
Match: A0A5D6YD22_9STRA (Kinesin motor domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YD22_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 6.060e-22
Identity = 41/70 (58.57%), Postives = 58/70 (82.86%), Query Frame = 0
Query:    1 RNSPLSVEIARVIEIGVRDSQALDTEALCILGGEKVWQLRCDVHILDHGGNLIDASTIATMAALRHFRRP 70
            R SPL+VE+AR++E G+R+ +ALDTEAL I+ GEKVW + C +H++DHGGNL+D  ++A +AAL H+RRP
Sbjct:   10 RPSPLAVELARIVERGIRECRALDTEALAIVAGEKVWAITCTLHVVDHGGNLVDCVSLAAIAALLHYRRP 79          
BLAST of mRNA_H-paniculata_contig14521.2709.1 vs. uniprot
Match: A0A2D4C8I4_PYTIN (Exosome complex exonuclease RRP45-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C8I4_PYTIN)

HSP 1 Score: 97.1 bits (240), Expect = 6.530e-22
Identity = 39/70 (55.71%), Postives = 58/70 (82.86%), Query Frame = 0
Query:    1 RNSPLSVEIARVIEIGVRDSQALDTEALCILGGEKVWQLRCDVHILDHGGNLIDASTIATMAALRHFRRP 70
            R SPL++E+AR+++ G+R+ +ALDTEAL I+ GEKVW + C +H++DHGGNLID  ++A +AA+ H+RRP
Sbjct:  102 RPSPLAIELARIVDRGIRECRALDTEALAIVAGEKVWSITCTIHVVDHGGNLIDCVSLAAIAAMMHYRRP 171          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14521.2709.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4N5_ECTSI1.900e-4095.713'-5'-exoribonuclease/ RNA binding n=1 Tax=Ectocar... [more]
A0A6H5KDM4_9PHAE2.800e-3291.43RNase_PH domain-containing protein n=1 Tax=Ectocar... [more]
A0A835ZEC1_9STRA5.000e-2772.86Ribosomal protein S5 domain 2-type protein n=1 Tax... [more]
A0A662Y5E3_9STRA2.070e-2359.42RNase_PH domain-containing protein (Fragment) n=2 ... [more]
A0A8K1C7Y8_PYTOL9.450e-2358.57Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2P6N4M7_9EUKA1.170e-2260.00Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A7S1CIZ9_9STRA1.230e-2260.87Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
K3X4Z2_GLOUD4.920e-2255.71Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6YD22_9STRA6.060e-2258.57Kinesin motor domain-containing protein (Fragment)... [more]
A0A2D4C8I4_PYTIN6.530e-2255.71Exosome complex exonuclease RRP45-like protein n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001247Exoribonuclease, phosphorolytic domain 1PFAMPF01138RNase_PHcoord: 4..70
e-value: 1.9E-8
score: 34.8
IPR027408PNPase/RNase PH domain superfamilyGENE3D3.30.230.70coord: 1..73
e-value: 2.1E-23
score: 85.0
NoneNo IPR availablePANTHERPTHR11097:SF14EXOSOME COMPLEX COMPONENT RRP45coord: 3..70
NoneNo IPR availablePANTHERPTHR11097EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEINcoord: 3..70
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 3..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14521contigH-paniculata_contig14521:375..1167 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14521.2709.1mRNA_H-paniculata_contig14521.2709.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14521 375..1167 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14521.2709.1 ID=prot_H-paniculata_contig14521.2709.1|Name=mRNA_H-paniculata_contig14521.2709.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=74bp
RNSPLSVEIARVIEIGVRDSQALDTEALCILGGEKVWQLRCDVHILDHGG
NLIDASTIATMAALRHFRRPGLLS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001247ExoRNase_PH_dom1
IPR027408PNPase/RNase_PH_dom_sf
IPR020568Ribosomal_S5_D2-typ_fold