prot_H-paniculata_contig1452.2705.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1452.2705.1
Unique Nameprot_H-paniculata_contig1452.2705.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length325
Homology
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BLAST of mRNA_H-paniculata_contig1452.2705.1 vs. uniprot
Match: A0A6H5KI56_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI56_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 1.100e-38
Identity = 83/124 (66.94%), Postives = 95/124 (76.61%), Query Frame = 0 
Query:    1 MLRKDGLGVLSFILRTLKQAQRTQREYILEYLRLHLRIAGASKEGCVDGHQDPIFDKVPNLYSLLVNEQQTAEAIGSTALFRIGAGSGQQRVGRSGTGLWLSLERRGRMHLLLCADLIRFYRQD 124
            MLR DG GVL F+LR   +AQRTQREYI+EYLRLHLRIA A++EGC +G +DPIFD VP LY LLVNEQ+ A A+GS AL        QQR  R G GLWLSLERRGR HLLLCADL+R YR++
Sbjct:   37 MLRSDGSGVLDFVLRRFSKAQRTQREYIVEYLRLHLRIARAAREGCAEGDRDPIFDAVPTLYRLLVNEQEIAGAVGSAALQL------QQRR-RGGPGLWLSLERRGRAHLLLCADLVRCYREE 153
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BLAST of mRNA_H-paniculata_contig1452.2705.1 vs. uniprot
Match: D8LNB7_ECTSI (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNB7_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 1.330e-30
Identity = 71/107 (66.36%), Postives = 82/107 (76.64%), Query Frame = 0 
Query:   18 KQAQRTQREYILEYLRLHLRIAGASKEGCVDGHQDPIFDKVPNLYSLLVNEQQTAEAIGSTALFRIGAGSGQQRVGRSGTGLWLSLERRGRMHLLLCADLIRFYRQD 124
            K  +RTQREYI+EYLRLHLRIA A++EGC +G +DPIFD VP LY LLVNEQ+ A A+GS AL        QQR  R G GLWLSLERRGR HLLLCADL+R YR++
Sbjct:  134 KILERTQREYIVEYLRLHLRIARAAREGCAEGDRDPIFDAVPTLYRLLVNEQEIAGAVGSAALQL------QQRR-RGGPGLWLSLERRGRAHLLLCADLVRCYREE 233
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1452.2705.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KI56_9PHAE1.100e-3866.94Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LNB7_ECTSI1.330e-3066.36Non-specific serine/threonine protein kinase n=1 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..325

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1452contigH-paniculata_contig1452:6753..10589 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1452.2705.1mRNA_H-paniculata_contig1452.2705.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1452 6753..10589 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1452.2705.1 ID=prot_H-paniculata_contig1452.2705.1|Name=mRNA_H-paniculata_contig1452.2705.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=325bp
MLRKDGLGVLSFILRTLKQAQRTQREYILEYLRLHLRIAGASKEGCVDGH
QDPIFDKVPNLYSLLVNEQQTAEAIGSTALFRIGAGSGQQRVGRSGTGLW
LSLERRGRMHLLLCADLIRFYRQDHTDATSSEKNAGGGGGGGCLDKENSG
GWTEREDGGALDNNGTDDCESGVDDGDGDDDAGNVAAFAVGGCGARGGKR
KNRARKAGERRGGGEGGGAHYSGGGGEGRRRGTGSRGGHCSGGERKRTRV
TDPWEDILGALHAGAPVTLTPQGSGHLPSISQDSCGRRSPTNAAGSGAGA
TGGGSGAGGGAASAAQTLPWLQLLA
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