mRNA_H-paniculata_contig145.2698.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig145.2698.1 vs. uniprot
Match: D8LU75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU75_ECTSI) HSP 1 Score: 124 bits (311), Expect = 1.120e-30 Identity = 70/182 (38.46%), Postives = 103/182 (56.59%), Query Frame = 3 Query: 246 RPPVCNNEMGGSDMNLVSFAEHWGNHALRQFSLAGLSSDVVKTWSS----KPNLVSWYLLKEYLNRDQSSTESIPEATLNDVLSSVQAILQTRYSAIGIAEEVSTTIKLFDNALKMPGINWRKRLETVGVIDSAGRGLG-NSEQEETLDHAMENPRIRQLLRLDLLLYEHAVKVFQQQASSY 776 + PVC L +FAE WGN A+RQF+LA +S VK W++ + WYL+KEYL R + + + L L V+ +L T+Y+A+GIA+E+ TT+ LF AL M G++W T+G+ + + + + E A+ENPRI LRLD+ LYEHAV VF+ Q + + Sbjct: 88 KDPVCPPT---ESTGLAAFAELWGNFAMRQFALAAVSPSAVKEWAAQRQARTGTSMWYLVKEYLARGGIAEDEV----LGSKLEPVKGLLSTQYAAVGIAQELKTTMVLFSKALSMEGLDWSSSWATLGINEEDKQDSEYDITESEPFRQALENPRIVSALRLDMSLYEHAVHVFKDQVAQF 262
BLAST of mRNA_H-paniculata_contig145.2698.1 vs. uniprot
Match: A0A6H5JQM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM0_9PHAE) HSP 1 Score: 124 bits (311), Expect = 7.330e-29 Identity = 70/185 (37.84%), Postives = 105/185 (56.76%), Query Frame = 3 Query: 237 ESWRPPVCNNEMGGSDMNLVSFAEHWGNHALRQFSLAGLSSDVVKTWSS----KPNLVSWYLLKEYLNRDQSSTESIPEATLNDVLSSVQAILQTRYSAIGIAEEVSTTIKLFDNALKMPGINWRKRLETVGVIDSAGRGLG-NSEQEETLDHAMENPRIRQLLRLDLLLYEHAVKVFQQQASSY 776 E+ + PVC LV FAE WGN A+RQF+L +S VK W++ + WYL+KEYL R + + + L +L V+ +L T+Y+A+GIA+E+ TT+ LF AL M G++W T+G+ + + + + E A+ENPRI LRLD+ LYEHA+ VF+ Q + + Sbjct: 363 EAPKDPVCPPT---ESTGLVVFAELWGNFAMRQFALESVSPSAVKEWAAQRQARTGTSMWYLVKEYLARGGIAEDEV----LESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSMEGLDWSSSWATLGINEEVKQDSEYDIAESEPFRQALENPRIVSALRLDMSLYEHAMHVFKDQVAQF 540
BLAST of mRNA_H-paniculata_contig145.2698.1 vs. uniprot
Match: D7G715_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G715_ECTSI) HSP 1 Score: 119 bits (297), Expect = 1.480e-27 Identity = 73/191 (38.22%), Postives = 108/191 (56.54%), Query Frame = 3 Query: 255 VCNNEMGGS-DMNLVSFAEHWGNHALRQFSLAGLSSDVVKTWSSKPN--------------LVSWYLLKEYLN-RDQSSTESIPEAT-LNDVLSSVQAILQTRYSAIGIAEEVSTTIKLFDNALKMPGINWRKRLETVGVIDSAGRGLGNSEQEETLDHAMENPRIRQLLRLDLLLYEHAVKVFQQQASSY 776 +C +E S +++LV+FA HWGN ALRQF+L +S D VK + PN + WY+LK +LN R + ++ PE T L + V +L+ Y+ +GI E+ + T+ LFD+AL MPG+ WR+ E G ++ R G E+++ L A+ +P I + L LDL LY AV +F QQ SY Sbjct: 196 LCASEFVSSRNVDLVTFARHWGNFALRQFALGFVSHDKVKDFLVSPNGGGAMGLTAEQVELMPGWYMLKLFLNDRSGVADDTSPEGTRLEYMFRPVVDLLRDNYAVVGILEDWNATLSLFDSALDMPGMTWREEFERSGKLNVDTRFKG--EKQDVLQQALSDPEIVKHLSLDLRLYGQAVDIFNQQRHSY 384
BLAST of mRNA_H-paniculata_contig145.2698.1 vs. uniprot
Match: D7FWQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ3_ECTSI) HSP 1 Score: 115 bits (287), Expect = 8.000e-26 Identity = 70/204 (34.31%), Postives = 108/204 (52.94%), Query Frame = 3 Query: 255 VCNNEM-GGSDMNLVSFAEHWGNHALRQFSLAGLSSDVVKTWSSKPN-----------LVSWYLLKEYLNRDQSSTESIP----------------EATLNDVLSSVQAILQTRYSAIGIAEEVSTTIKLFDNALKMPGINWRKRLETVGV--IDSAGRGLGNSEQEETLDHAMENPRIRQLLRLDLLLYEHAVKVFQQQASSY 776 C +E+ D++L++FA+HWGN A+RQF+L + SD V+ + P + WY LK YL R + +P EA L D+L ++++ Y A+GI E+ +TT+ LFD+AL++PG+ W + G +D + L + ETL A + +++ +RLDLLLYEHAV VF +QA Y Sbjct: 259 ACASEVVDAKDVDLLTFAKHWGNFAVRQFALGFVPSDGVQEYIRTPEAQALHDFDLKKIAGWYQLKMYLERPEKGDWGVPGQSEAMTVEHDAAATLEAPLYDLLQPAMDLIRSGYVAVGILEQWNTTLHLFDHALEIPGMYWGAQFAEGGKQRVDYKNKRL----ESETLKQAWTDSELKKYMRLDLLLYEHAVDVFHEQARGY 458
BLAST of mRNA_H-paniculata_contig145.2698.1 vs. uniprot
Match: D7G716_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G716_ECTSI) HSP 1 Score: 111 bits (277), Expect = 1.970e-24 Identity = 70/193 (36.27%), Postives = 104/193 (53.89%), Query Frame = 3 Query: 255 VCNNE-MGGSDMNLVSFAEHWGNHALRQFSLAGLSSDVVKTWSSKPNLVSWYLLKEYLNRDQSSTESI----------------PEATLNDVLSSVQAILQTRYSAIGIAEEVSTTIKLFDNALKMPGINWRKRLETVGV--IDSAGRGLGNSEQEETLDHAMENPRIRQLLRLDLLLYEHAVKVFQQQASSY 776 C +E M D++L++FA+HWGN ALRQF+L + SD V+ Y LK YL R Q + P+A L ++L +++ Y A+GI E+ +TT++LFD+ L MP +NW ++ G +D + L + ETL A + +++ +RLDLLLYEHAV VF QQA S+ Sbjct: 280 ACASEVMQAKDVDLLTFAKHWGNFALRQFALGFVPSDDVQE----------YQLKMYLERPQKEDGGVLGQREAMTAHQDAAATPDAPLYELLQPAMDLVRDGYVAVGILEQWNTTLRLFDHTLDMPVMNWEEQFAESGKHHVDIVNKQL----EIETLQQAWTDSELKKYMRLDLLLYEHAVDVFHQQARSH 458
BLAST of mRNA_H-paniculata_contig145.2698.1 vs. uniprot
Match: D7FS84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS84_ECTSI) HSP 1 Score: 106 bits (264), Expect = 1.760e-23 Identity = 64/197 (32.49%), Postives = 102/197 (51.78%), Query Frame = 3 Query: 267 EMGGSDMNLVSFAEHWGNHALRQFSLAGL-------------SSDVVKTWSSKPNLVSWYLLKEYLNR--------------DQSSTESIPEATLNDVLSSVQAILQTRYSAIGIAEEVSTTIKLFDNALKMPGINWRKRLETVGVIDSAGRGLGNSEQEETLDHAMENPRIRQLLRLDLLLYEHAVKVFQQQASSY 776 + D +L +FAEHWG+ LRQF+LA + ++ + + K + WY LK YL + D S + AT++ +L VQ +L Y+A+G+ E+ T++ LF+ AL MPG +W + ++G +S G ++E+ E L + +PR+R+ L LDLLLY++AV V QQ Y Sbjct: 104 DANADDTDLYAFAEHWGDFGLRQFALAFVLPEELLANKVKYDATGICTPYHGKRSCPGWYELKLYLQQQLDEQEQGEGSRGWDGSGAAASGAATISHLLQPVQELLTNEYAAVGVLEQWETSLLLFNEALGMPGFDWPETFGSIGKKNSDG--TFHNEEAEMLLRSWTDPRLRRYLSLDLLLYDYAVSVHNQQVDKY 298
BLAST of mRNA_H-paniculata_contig145.2698.1 vs. uniprot
Match: A0A6H5JY77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY77_9PHAE) HSP 1 Score: 101 bits (251), Expect = 2.300e-21 Identity = 59/182 (32.42%), Postives = 99/182 (54.40%), Query Frame = 3 Query: 270 MGGSDMNLVSFAEHWGNHALRQFSLAGLSSD------VVKTWSSKPN------LVSWYLLKEYLN---RDQSSTESIPEATLNDVLSSVQAILQTRYSAIGIAEEVSTTIKLFDNALKMPGINWRKRLETVGVIDSAGRGLGNSEQEETLDHAMENPRIRQLLRLDLLLYEHAVKVFQQQAS 770 + S ++L++FAEHWGN+ LRQF+LA + ++ VV + + + +WY K YL+ +D + PE+ L LSS Q L TRY+A+GI EE +++LF+ L + +W K + G +S G + + L A +P +++ + LD+LLY+HA+ V + Q + Sbjct: 157 LDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHNEVVSEFCQQARGHGDVCIPAWYRQKHYLHLPHQDDFCGPTQPESGLAQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLRRFDWVKEFQKSGKKNSGGSQF-ETASKSALKAAWHSPELKKFIWLDILLYDHALSVHRSQVA 337
BLAST of mRNA_H-paniculata_contig145.2698.1 vs. uniprot
Match: A0A6H5JQY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY7_9PHAE) HSP 1 Score: 97.1 bits (240), Expect = 6.070e-20 Identity = 61/180 (33.89%), Postives = 99/180 (55.00%), Query Frame = 3 Query: 282 DMNLVSFAEHWGNHALRQFSLA--GLSSDVVKTWSSKPNLVSWYLLKEYL------------NRDQSSTESIPEATLNDVLSSVQAILQTRYSAIGIAEEVSTTIKLFDNALKMPGINWRKRLETVGVIDSAGRGLGNSE-QEETLDHAMENPRIRQLLRLDLLLYEHAVKVFQQQASSY 776 D ++ FAEHWGNH + QF+LA L+ +V S P WY K Y + + S+ + + ++L V+ +L+++Y+A+GI E+ T++ LFD+AL++PG NW T S R + +S+ + + L +M +P ++Q+L LD+LLYEHA V + Q S Y Sbjct: 147 DGDIYDFAEHWGNHGVVQFALAFEDLNDILVTEVKSPP----WYKAKLYFEGRLGPSGKTSTSANISTKDVCQNVWMPEILQPVEELLRSKYAAVGILEQWETSMMLFDHALQLPGFNW-----TSTSASSTPRNVHDSKAKNDLLVASMTDPVLKQILWLDILLYEHACSVHKAQLSRY 317
BLAST of mRNA_H-paniculata_contig145.2698.1 vs. uniprot
Match: A0A6H5L061_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L061_9PHAE) HSP 1 Score: 89.7 bits (221), Expect = 6.850e-18 Identity = 57/194 (29.38%), Postives = 97/194 (50.00%), Query Frame = 3 Query: 243 WRPPVCNNEMGGSDMNLVSFAEHWGNHALRQFSLAGLSSDVV------KTWSSKPNLV-SWYLLKEYLNRD---------QSSTESIPEATLNDVLSSVQAILQTRYSAIGIAEEVSTTIKLFDNALKMPGINWRKRLETVGVIDSAGRGLGNSEQEETLDHAMENPRIRQLLRLDLLLYEHAVKVFQQQASSY 776 W + + + +L +FA+HWGN+ LRQFSLA + ++ V + +P + WY +KEY T + + ++ +L V+ +L YSA+GI E+ T++ LF+ ALK+P NW+ +G + R + E+ L A ++P + + L LD+ LY+HAV V +Q + Sbjct: 37 WDELCASMVLKAGNTDLHTFAKHWGNYGLRQFSLAFVGAEDVFAAEQERGIDGRPVMFPGWYRVKEYFENQFDVEQERALMQETGASNDLAMSYLLQPVEDLLSRNYSAVGILEKWETSMTLFNKALKVPSFNWQTASRNLGRKNVDKRL--HDEEAHALRAAWDDPVLAKTLWLDIFLYDHAVAVHNKQVEEH 228
BLAST of mRNA_H-paniculata_contig145.2698.1 vs. uniprot
Match: A0A6H5JNJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ0_9PHAE) HSP 1 Score: 90.9 bits (224), Expect = 1.110e-17 Identity = 58/180 (32.22%), Postives = 96/180 (53.33%), Query Frame = 3 Query: 282 DMNLVSFAEHWGNHALRQFSLAGLSSDVVKTWSSKPNLVSWYLLKEYLNRDQSSTESIPEAT------------LNDVLSSVQAILQTRYSAIGIAEEVSTTIKLFDNALKMPGINWRKRLETVGVIDSAGRGLGNS--EQEETLDHAMENPRIRQLLRLDLLLYEHAVKVFQQQASSYD 779 D ++ FA+HWGN+AL QF+L + D + ++ + + +W+ K Y ++ AT + D+L V+ +L++ Y+A+GI E ++ LFD+AL++PG NW TV + R N E++ L AM +P +RQ + LDLLLYE+A + ++Q YD Sbjct: 146 DGDIYDFAKHWGNYALLQFALGVV--DQHEIFAEEVDAPAWFKAKLYFEGRLGYPGNMSTATNRTTHDEWQSVWIPDILQPVEELLRSNYAAVGILEHWQRSMMLFDHALEIPGFNW-----TVASASLSPRKSQNKIVEKKAMLAAAMTDPVLRQYVWLDLLLYEYACSLHEEQLRRYD 318 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig145.2698.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig145.2698.1 >prot_H-paniculata_contig145.2698.1 ID=prot_H-paniculata_contig145.2698.1|Name=mRNA_H-paniculata_contig145.2698.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=174bp MGGSDMNLVSFAEHWGNHALRQFSLAGLSSDVVKTWSSKPNLVSWYLLKEback to top mRNA from alignment at H-paniculata_contig145:34398..36802- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig145.2698.1 ID=mRNA_H-paniculata_contig145.2698.1|Name=mRNA_H-paniculata_contig145.2698.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2405bp|location=Sequence derived from alignment at H-paniculata_contig145:34398..36802- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig145:34398..36802- >mRNA_H-paniculata_contig145.2698.1 ID=mRNA_H-paniculata_contig145.2698.1|Name=mRNA_H-paniculata_contig145.2698.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1044bp|location=Sequence derived from alignment at H-paniculata_contig145:34398..36802- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |