prot_H-paniculata_contig14494.2691.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14494.2691.1
Unique Nameprot_H-paniculata_contig14494.2691.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length485
Homology
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BLAST of mRNA_H-paniculata_contig14494.2691.1 vs. uniprot
Match: A0A6H5KP75_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KP75_9PHAE)

HSP 1 Score: 282 bits (721), Expect = 1.950e-80
Identity = 219/508 (43.11%), Postives = 264/508 (51.97%), Query Frame = 0 
Query:    8 ATSAVLLSLAVCVGVGWCYARR-RKQRDLIKSSGGATVTDG--TRRDFSRGDSGASSELHVEANCDGPVTALALKPLVKPHTIQSTTPMADAGDSTGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRT-----LGGSVADSSDSEFS------------------AASTTSTAWTADGFQTPARTDVPRGSAGVRYSGGGRRPESGDSMIGGHVGMRTPGSHLGLVTGTASTPAR--LVPDTPSPRSTLSASGAGTPHPPEMRLAHFARSNTSLAGGASGDNDLYGVPEVEINRSASNLFESNSSPPSGDIQQNSWPAGTTHFRGISASSLPPGTSSLSVDPSVIGGXXXXXXXXXXXXXXXXAGAGLDSSGNGQRRKFGRLSNRSSRTSATS----GPGSPPPMDSEGSGRSGFDTAEKGFAEEAELEALQIDKNDLKLVFGRPFARGKTSEVYQVTHAGKNRAAKIIDLFLLGVVGDEVTRLYSCFAQELRTMKGIRHE 483
            AT+A+L+   V VG+  CY RR RK+ +L + S       G          DS  SSE +VEAN +GP   LA KPLVKPH +QST PM     + G++                                 + T      GG   DSS S+                    + ST S+ W  DGF TPAR ++PRG+ G RY  G       + +     G +TPG+       +A+TP R   +P+TPSPRS +S+S  GTP PP MR+A F R      GG  GD  LYG+PE+EI RS SNL+ESN   PSG     SWP G       S    PP  +S++      G                 A A   +S   +    GR+SNRSSRT+  S    G G     D EG G  G + A + F EEAELEALQIDKNDLKLVFGRPFARGK+SEVYQVTHAGKNRAAKIIDLF LGVVG+EVTRLY  FAQELR MKGIRHE
Sbjct:  598 ATAAILIPGFVLVGLFCCYRRRKRKEGELKRPSAAVGAGSGGXXXXXXXXXDSFTSSENNVEANGEGPTDTLANKPLVKPHALQSTAPMTGGQQAGGEAATAATAATVGDSAEGLPRPPTAAAVMAPGAAIPAGTPAAGTAGGDDDDSSRSDLENPGRLRRTGSNSSISTLGSTSTASSTWPNDGFVTPARNNIPRGAGGGRYGLGXXXXXXXEGLP---PGYKTPGNL------SAATPNREMTIPETPSPRS-VSSSVHGTPAPPGMRIAQFLR-----VGGGGGDTSLYGLPEMEIGRSTSNLYESN---PSGS----SWPVG-------SKGGAPPTAASIAAXXXATGSAQPTPGDGANPSPINNATA---TSPTAELDTGGRMSNRSSRTAGASPTTWGAGGAW-GDREGGGGMGAEAAAQAFTEEAELEALQIDKNDLKLVFGRPFARGKSSEVYQVTHAGKNRAAKIIDLFSLGVVGEEVTRLYEAFAQELRAMKGIRHE 1072
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14494.2691.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KP75_9PHAE1.950e-8043.11Protein kinase domain-containing protein n=2 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..484
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14494contigH-paniculata_contig14494:1089..5917 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14494.2691.1mRNA_H-paniculata_contig14494.2691.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14494 1089..5917 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14494.2691.1 ID=prot_H-paniculata_contig14494.2691.1|Name=mRNA_H-paniculata_contig14494.2691.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=485bp
SGAVAAIATSAVLLSLAVCVGVGWCYARRRKQRDLIKSSGGATVTDGTRR
DFSRGDSGASSELHVEANCDGPVTALALKPLVKPHTIQSTTPMADAGDST
GDSATAGAADATAADAGVTEEANASGSPVAEDDANGSRTLGGSVADSSDS
EFSAASTTSTAWTADGFQTPARTDVPRGSAGVRYSGGGRRPESGDSMIGG
HVGMRTPGSHLGLVTGTASTPARLVPDTPSPRSTLSASGAGTPHPPEMRL
AHFARSNTSLAGGASGDNDLYGVPEVEINRSASNLFESNSSPPSGDIQQN
SWPAGTTHFRGISASSLPPGTSSLSVDPSVIGGGGAGGGSNNGASAAASA
GAGLDSSGNGQRRKFGRLSNRSSRTSATSGPGSPPPMDSEGSGRSGFDTA
EKGFAEEAELEALQIDKNDLKLVFGRPFARGKTSEVYQVTHAGKNRAAKI
IDLFLLGVVGDEVTRLYSCFAQELRTMKGIRHEW*
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