mRNA_H-paniculata_contig14494.2691.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14494.2691.1 vs. uniprot
Match: A0A6H5KP75_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KP75_9PHAE) HSP 1 Score: 282 bits (721), Expect = 1.950e-80 Identity = 219/508 (43.11%), Postives = 264/508 (51.97%), Query Frame = 1 Query: 22 ATSAVLLSLAVCVGVGWCYARR-RKQRDLIKSSGGATVTDG--TRRDFSRGDSGASSELHVEANCDGPVTALALKPLVKPHTIQSTTPMADAGDSTGDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRT-----LGGSVADSSDSEFS------------------AASTTSTAWTADGFQTPARTDVPRGSAGVRYSGGGRRPESGDSMIGGHVGMRTPGSHLGLVTGTASTPAR--LVPDTPSPRSTLSASGAGTPHPPEMRLAHFARSNTSLAGGASGDNDLYGVPEVEINRSASNLFESNSSPPSGDIQQNSWPAGTTHFRGISASSLPPGTSSLSVDPSVIGGXXXXXXXXXXXXXXXXAGAGLDSSGNGQRRKFGRLSNRSSRTSATS----GPGSPPPMDSEGSGRSGFDTAEKGFAEEAELEALQIDKNDLKLVFGRPFARGKTSEVYQVTHAGKNRAAKIIDLFLLGVVGDEVTRLYSCFAQELRTMKGIRHE 1449 AT+A+L+ V VG+ CY RR RK+ +L + S G DS SSE +VEAN +GP LA KPLVKPH +QST PM + G++ + T GG DSS S+ + ST S+ W DGF TPAR ++PRG+ G RY G + + G +TPG+ +A+TP R +P+TPSPRS +S+S GTP PP MR+A F R GG GD LYG+PE+EI RS SNL+ESN PSG SWP G S PP +S++ G A A +S + GR+SNRSSRT+ S G G D EG G G + A + F EEAELEALQIDKNDLKLVFGRPFARGK+SEVYQVTHAGKNRAAKIIDLF LGVVG+EVTRLY FAQELR MKGIRHE Sbjct: 598 ATAAILIPGFVLVGLFCCYRRRKRKEGELKRPSAAVGAGSGGXXXXXXXXXDSFTSSENNVEANGEGPTDTLANKPLVKPHALQSTAPMTGGQQAGGEAATAATAATVGDSAEGLPRPPTAAAVMAPGAAIPAGTPAAGTAGGDDDDSSRSDLENPGRLRRTGSNSSISTLGSTSTASSTWPNDGFVTPARNNIPRGAGGGRYGLGXXXXXXXEGLP---PGYKTPGNL------SAATPNREMTIPETPSPRS-VSSSVHGTPAPPGMRIAQFLR-----VGGGGGDTSLYGLPEMEIGRSTSNLYESN---PSGS----SWPVG-------SKGGAPPTAASIAAXXXATGSAQPTPGDGANPSPINNATA---TSPTAELDTGGRMSNRSSRTAGASPTTWGAGGAW-GDREGGGGMGAEAAAQAFTEEAELEALQIDKNDLKLVFGRPFARGKSSEVYQVTHAGKNRAAKIIDLFSLGVVGEEVTRLYEAFAQELRAMKGIRHE 1072 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14494.2691.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14494.2691.1 >prot_H-paniculata_contig14494.2691.1 ID=prot_H-paniculata_contig14494.2691.1|Name=mRNA_H-paniculata_contig14494.2691.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=485bp SGAVAAIATSAVLLSLAVCVGVGWCYARRRKQRDLIKSSGGATVTDGTRRback to top mRNA from alignment at H-paniculata_contig14494:1089..5917- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14494.2691.1 ID=mRNA_H-paniculata_contig14494.2691.1|Name=mRNA_H-paniculata_contig14494.2691.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4829bp|location=Sequence derived from alignment at H-paniculata_contig14494:1089..5917- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14494:1089..5917- >mRNA_H-paniculata_contig14494.2691.1 ID=mRNA_H-paniculata_contig14494.2691.1|Name=mRNA_H-paniculata_contig14494.2691.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2910bp|location=Sequence derived from alignment at H-paniculata_contig14494:1089..5917- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |