prot_H-paniculata_contig14470.2687.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14470.2687.1
Unique Nameprot_H-paniculata_contig14470.2687.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length203
Homology
BLAST of mRNA_H-paniculata_contig14470.2687.1 vs. uniprot
Match: D8LTR5_ECTSI (Arf-GAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTR5_ECTSI)

HSP 1 Score: 271 bits (693), Expect = 1.220e-83
Identity = 142/204 (69.61%), Postives = 156/204 (76.47%), Query Frame = 0
Query:    1 RTLLEREDNKTCADCTAKLPTWASVNIGVFLCTQCSGCHRALGVHISKVLSVQLDDWTEDRVEFMAGVGNQFANSFLEYHVPGDWLKPSHLEPRKYRESYIKAKYQDRLFEFRGRKKPVIKPPPPQVGEPGAHEDFVTHGVVSTAALS----------KHGMMEYIGFVSIMLSRGKDLVPAGFVGQKHQYMAVLRIGSQEVRT 194
            R+LLEREDN  CADCTAKLPTWASVN GVFLCTQC+GCHR+LGVHISKVLSVQLDDWT+ +VEFMAG+GN+  NSFLEYHVP  WLKPSHLEPR YR++YIKAKYQ RLFEFRG+KKPVIKPPPP       H   +  GV   A              HGM EYIGFV+I L RG+ LV AGF GQ  QYMAVLRIG QEVR+
Sbjct:  151 RSLLEREDNIVCADCTAKLPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLDDWTKAQVEFMAGMGNKMVNSFLEYHVPSTWLKPSHLEPRDYRDAYIKAKYQSRLFEFRGKKKPVIKPPPPV-----DHASAMVSGVDGDAGGDGSGERGGSGFSHGMTEYIGFVNINLVRGESLVHAGF-GQL-QYMAVLRIGGQEVRS 347          
BLAST of mRNA_H-paniculata_contig14470.2687.1 vs. uniprot
Match: A0A6H5L6N3_9PHAE (Arf-GAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6N3_9PHAE)

HSP 1 Score: 254 bits (649), Expect = 5.890e-77
Identity = 131/199 (65.83%), Postives = 148/199 (74.37%), Query Frame = 0
Query:    1 RTLLEREDNKTCADCTAKLPTWASVNIGVFLCTQCSGCHRALGVHISKVLSVQLDDWTEDRVEFMAGVGNQFANSFLEYHVPGDWLKPSHLEPRKYRESYIKAKYQDRLFEFRGRKKPVIKPPPP----QVGEPGAHEDFVTHGVVSTAALS-KHGMMEYIGFVSIMLSRGKDLVPAGFVGQKHQYMAVLRIGSQEVRT 194
            R+LLERE+N  CADCTAKLPTWASVN GVFLCTQC+GCHR+LGVHISKVLSVQLDDWT+ +V+FMAG+GN+ ANSFLEYHVP  WLKPSHLEPR YR++YIKAKYQ RLFEFRG+KKPVIKPPPP         GA  D    G          HGM EYIGFV+I L+RG+ LV AGF           + G QEVR+
Sbjct:  189 RSLLEREENIVCADCTAKLPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLDDWTKAQVDFMAGMGNEMANSFLEYHVPSTWLKPSHLEPRDYRDAYIKAKYQSRLFEFRGKKKPVIKPPPPVDHASAMVSGADGDAGGDGAGERGGSGVSHGMTEYIGFVNINLARGESLVHAGFS----------QAGGQEVRS 377          
BLAST of mRNA_H-paniculata_contig14470.2687.1 vs. uniprot
Match: A0A833QKA0_9POAL (Uncharacterized protein n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QKA0_9POAL)

HSP 1 Score: 132 bits (333), Expect = 4.180e-34
Identity = 77/196 (39.29%), Postives = 113/196 (57.65%), Query Frame = 0
Query:    3 LLEREDNKTCADCTAKLPTWASVNIGVFLCTQCSGCHRALGVHISKV-LSVQLDDWTEDRVEFMAGVG-NQFANSFLEYHVPGDWLKPSHLEPRKYRESYIKAKYQDRLFEFRGRKKPVIKPPPPQVGEPGAHEDFV--THGVVSTAALSKHGMMEYIGFVSIMLSRGKDLVPAGFVGQKHQYMAVLRIGSQEVRT 194
            LL + +N+ CADC A  P WAS NIGVF+C +CSG HR+LG HISKV LSV LD+WTED+++ M  VG N +AN+  E  +P D+ KP+     + R  +I+AKY+ + F         +KP    V    + + F    HG  S +  S+ GM+E+IG + I + +G +L    F  +      +L +G Q+ +T
Sbjct:   22 LLLKSENRICADCRAPDPKWASANIGVFICVKCSGVHRSLGTHISKVVLSVTLDEWTEDQIDSMLQVGGNSYANTVYEAFLPKDYPKPTANASNEERADFIRAKYETQEF---------LKPSLRIVSSKSSSDSFKDSNHGQASASFKSEVGMIEFIGILEIKVKKGANLAIRDF--RSSDPYVILTLGQQKAQT 206          
BLAST of mRNA_H-paniculata_contig14470.2687.1 vs. uniprot
Match: UPI00155A831E (ADP-ribosylation factor GTPase-activating protein AGD12-like n=1 Tax=Vitis riparia TaxID=96939 RepID=UPI00155A831E)

HSP 1 Score: 129 bits (324), Expect = 1.660e-33
Identity = 79/201 (39.30%), Postives = 110/201 (54.73%), Query Frame = 0
Query:    3 LLEREDNKTCADCTAKLPTWASVNIGVFLCTQCSGCHRALGVHISKVLSVQLDDWTEDRVEFMAGVG-NQFANSFLEYHVPGDWLKPSHLEPRKYRESYIKAKYQDRLFEFRGRKKPVIKPPPPQVGEPGAHEDF---VTHGVVSTAALSKHGMMEYIGFVSIMLSRGKDLVPAGFVGQKHQYMAVLRIGSQEVRTCSVTT 199
            LL + DN+TCADC A  P WAS NIGVF+C +C G HR+LG HISKVLSV LDDW++D ++ M  VG N  ANS  E  +P    KP      + R  +I++KY+  L EF    KP ++      G+      F   +     S+ +    GM+EYIG + + + RGK+L     +        VL +G Q V+T  +T+
Sbjct:   21 LLLKSDNRTCADCGAPDPKWASANIGVFICLKCCGVHRSLGTHISKVLSVALDDWSDDEIDAMVEVGGNSSANSIYEAFIPEGVTKPKPNSSHEERMRFIRSKYE--LQEFL---KPSLRIASVSSGKSSLQSSFSRKLMDNFRSSNSQKLEGMVEYIGLLKVKVIRGKNLAVRDMLSSDPY--VVLTLGPQTVQTQVITS 214          
BLAST of mRNA_H-paniculata_contig14470.2687.1 vs. uniprot
Match: J3LAL1_ORYBR (Uncharacterized protein n=14 Tax=Oryzeae TaxID=147380 RepID=J3LAL1_ORYBR)

HSP 1 Score: 130 bits (328), Expect = 2.060e-33
Identity = 78/193 (40.41%), Postives = 117/193 (60.62%), Query Frame = 0
Query:    3 LLEREDNKTCADCTAKLPTWASVNIGVFLCTQCSGCHRALGVHISKVLSVQLDDWTEDRVEFMAGVG-NQFANSFLEYHVPGDWLKPSHLEPRKYRESYIKAKYQDRLFEFRGRKKPVIKPPPPQVGEPGAHEDFVTHGVVSTAALSKHGMMEYIGFVSIMLSRGKDLVPAGFVGQKHQYMAVLRIGSQEVRT 194
            LL R +N+ CADC+A  P WAS NIGVF+C +CSG HR+LG HISKVLSV LD W+++ ++ M  VG N  AN+  E  +P  + KP     ++ RE++I++KY+  L EF    +P ++    Q  E G H +  +H  VS+   S  GM+E+IG +++ +  G +L     +     Y+ VL +G Q+V+T
Sbjct:   18 LLHRSENRICADCSAPDPKWASANIGVFICLKCSGVHRSLGAHISKVLSVTLDQWSDNEIDNMIEVGGNSHANAIYEAFLPESYSKPHPDSTQEERENFIRSKYE--LQEFL---EPSLRIVSHQSSESGKHAESGSHHSVSSK--SDVGMVEFIGILNVKVKGGTNLAIRD-MSSSDPYV-VLTLGQQKVQT 201          
BLAST of mRNA_H-paniculata_contig14470.2687.1 vs. uniprot
Match: A0A2T8KUC3_9POAL (Uncharacterized protein n=1 Tax=Panicum hallii TaxID=206008 RepID=A0A2T8KUC3_9POAL)

HSP 1 Score: 128 bits (321), Expect = 2.810e-33
Identity = 80/193 (41.45%), Postives = 110/193 (56.99%), Query Frame = 0
Query:    3 LLEREDNKTCADCTAKLPTWASVNIGVFLCTQCSGCHRALGVHISKVLSVQLDDWTEDRVEFMAGVG-NQFANSFLEYHVPGDWLKPSHLEPRKYRESYIKAKYQDRLFEFRGRKKPVIKPPPPQVGEPGAHEDFVTHGVVSTAALSKHGMMEYIGFVSIMLSRGKDLVPAGFVGQKHQYMAVLRIGSQEVRT 194
            LL R +N  CADC+A  P WAS NIGVF+C +CSG HR+LG HISKVLS  LD WTE+ VE M  VG N  ANS  E  +P  + KP      + RE +I++KY+  L EF    KP ++    Q  + G H     H   S  + S+ GM+E+IG +++ +  G +L     +     Y+ VL +G Q+ +T
Sbjct:   20 LLHRSENHICADCSAPDPKWASANIGVFICVKCSGVHRSLGTHISKVLSATLDKWTENEVESMIEVGGNSNANSIYEAFLPEGYQKPHPDSSPEEREKFIRSKYE--LQEFL---KPSLRIVSHQTSDSGKHAGGAPH---SDGSKSEIGMIEFIGILNVKVIGGTNLAIRD-MSSSDPYV-VLTLGHQKAQT 202          
BLAST of mRNA_H-paniculata_contig14470.2687.1 vs. uniprot
Match: A0A1W0A2J3_9STRA (ADP-ribosylation factor GTPase-activating protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2J3_9STRA)

HSP 1 Score: 132 bits (331), Expect = 3.180e-33
Identity = 76/192 (39.58%), Postives = 108/192 (56.25%), Query Frame = 0
Query:    3 LLEREDNKTCADCTAKLPTWASVNIGVFLCTQCSGCHRALGVHISKVLSVQLDDWTEDRVEFMAGVGNQFANSFLEYHVPGDWLKPSHLEPRKYRESYIKAKYQDRLFEF--RGRKKPVIKPPPPQVGEPGAHEDFVTHGVVSTAALSKHGMMEYIGFVSIMLSRGKDLVPAGFVGQKHQYMAVLRIGSQEV 192
            LL  E+N  CADCTA  P WA+V  G F+CTQC+G HR+LGVH+S VLS  LD WT ++++ +A +GN   N  LE+ VP +  KP+   PR+ RE YI AKY ++ F      R++  +  P      P A         V+ ++   HGM+EYIG ++I L  G +L      G    Y++  R+G Q +
Sbjct:   45 LLANEENLHCADCTAMHPKWATVTHGGFICTQCAGVHRSLGVHVSFVLSCTLDRWTREQIQHVAAIGNAKLNDTLEFSVPVNIRKPTGDCPREVREEYIVAKYVEQSFRMGPNKRRQEAMSSP----SRPIARN-------VAASSQGSHGMVEYIGILTIELVEGSNLAAMDVGGSSDPYVS-FRLGEQVI 224          
BLAST of mRNA_H-paniculata_contig14470.2687.1 vs. uniprot
Match: A0A3B6PLP9_WHEAT (Uncharacterized protein n=5 Tax=Triticum TaxID=4564 RepID=A0A3B6PLP9_WHEAT)

HSP 1 Score: 127 bits (318), Expect = 5.930e-33
Identity = 75/193 (38.86%), Postives = 113/193 (58.55%), Query Frame = 0
Query:    3 LLEREDNKTCADCTAKLPTWASVNIGVFLCTQCSGCHRALGVHISKVLSVQLDDWTEDRVEFMAGVG-NQFANSFLEYHVPGDWLKPSHLEPRKYRESYIKAKYQDRLFEFRGRKKPVIKPPPPQVGEPGAHEDFVTHGVVSTAALSKHGMMEYIGFVSIMLSRGKDLVPAGFVGQKHQYMAVLRIGSQEVRT 194
            LL+R +N+ CADC+A  P WAS NIGVF+C +CSG HR+LG HISKVLSV LD WT+D ++ M  VG N  AN+  E  +P  + KP     ++ R+++IK+KY+  L EF      ++   P   G+  ++         S ++ S+ GM+E+IG +++ +  G  L     V     Y+ VL +G Q+ +T
Sbjct:    7 LLDRSENRICADCSAPDPKWASANIGVFICVKCSGVHRSLGTHISKVLSVTLDKWTDDEIDSMVEVGGNSQANAIYEAFLPEGYRKPHPDSAQEDRQNFIKSKYE--LQEFLEPSLRIVSNHPSNAGKQASNSH-------SGSSKSEIGMVEFIGILNVKVIGGTKLAIRD-VSSSDPYV-VLTLGQQKAQT 188          
BLAST of mRNA_H-paniculata_contig14470.2687.1 vs. uniprot
Match: A0A2D4BL46_PYTIN (ADP-ribosylation factor GTPase-activating protein, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BL46_PYTIN)

HSP 1 Score: 134 bits (337), Expect = 8.510e-33
Identity = 77/194 (39.69%), Postives = 109/194 (56.19%), Query Frame = 0
Query:    4 LEREDNKTCADCTAKLPTWASVNIGVFLCTQCSGCHRALGVHISKVLSVQLDDWTEDRVEFMAGVGNQFANSFLEYHVPGDWLKPSHLEPRKYRESYIKAKYQDRLFEF---RGRKKPVIKPPPPQVGEPGAHEDFVTHG--VVSTAALSKHGMMEYIGFVSIMLSRGKDLVPAGFVGQKHQYMAVLRIGSQEV 192
            ++R +N +CADC A  P WASVN G F+CTQC+G HR+LGVH+S VLS  LD WT  +V+ +  VGN   N  LE+ VP D+ KP     R  RE +I+AKY+D LF+    + RK+ V+           A +   T G  V +  + +  GM+E++G + I L  G DL      G+   Y+   R+G Q +
Sbjct:  513 MQRVENASCADCNAPAPRWASVNHGCFICTQCAGVHRSLGVHVSFVLSCTLDRWTSAQVDGVERVGNDALNETLEFSVPDDYPKPHAESSRPERERFIRAKYEDELFKVSPDKPRKRAVLSSSSSSAPTSYAEDVAATDGNNVAARRSGTGVGMIEFVGVMVIELLEGIDLAGVDINGKSDPYVQ-FRLGEQAI 705          
BLAST of mRNA_H-paniculata_contig14470.2687.1 vs. uniprot
Match: D7TKJ5_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=D7TKJ5_VITVI)

HSP 1 Score: 129 bits (324), Expect = 9.420e-33
Identity = 79/201 (39.30%), Postives = 110/201 (54.73%), Query Frame = 0
Query:    3 LLEREDNKTCADCTAKLPTWASVNIGVFLCTQCSGCHRALGVHISKVLSVQLDDWTEDRVEFMAGVG-NQFANSFLEYHVPGDWLKPSHLEPRKYRESYIKAKYQDRLFEFRGRKKPVIKPPPPQVGEPGAHEDF---VTHGVVSTAALSKHGMMEYIGFVSIMLSRGKDLVPAGFVGQKHQYMAVLRIGSQEVRTCSVTT 199
            LL + DN+TCADC A  P WAS NIGVF+C +C G HR+LG HISKVLSV LDDW++D ++ M  VG N  ANS  E  +P    KP      + R  +I++KY+  L EF    KP ++      G+      F   +     S+ +    GM+EYIG + + + RGK+L     +        VL +G Q V+T  +T+
Sbjct:   21 LLLKSDNRTCADCGAPDPKWASANIGVFICLKCCGVHRSLGTHISKVLSVALDDWSDDEIDAMVEVGGNSSANSIYEAFIPEGVTKPKPNSSHEERMRFIRSKYE--LQEFL---KPSLRIASVSSGKSSLQSSFSRKLMDNFRSSNSQKLEGMVEYIGLLKVKVIRGKNLAVRDMLSSDPY--VVLTLGPQTVQTQVITS 214          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14470.2687.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTR5_ECTSI1.220e-8369.61Arf-GAP domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5L6N3_9PHAE5.890e-7765.83Arf-GAP domain-containing protein n=1 Tax=Ectocarp... [more]
A0A833QKA0_9POAL4.180e-3439.29Uncharacterized protein n=1 Tax=Carex littledalei ... [more]
UPI00155A831E1.660e-3339.30ADP-ribosylation factor GTPase-activating protein ... [more]
J3LAL1_ORYBR2.060e-3340.41Uncharacterized protein n=14 Tax=Oryzeae TaxID=147... [more]
A0A2T8KUC3_9POAL2.810e-3341.45Uncharacterized protein n=1 Tax=Panicum hallii Tax... [more]
A0A1W0A2J3_9STRA3.180e-3339.58ADP-ribosylation factor GTPase-activating protein ... [more]
A0A3B6PLP9_WHEAT5.930e-3338.86Uncharacterized protein n=5 Tax=Triticum TaxID=456... [more]
A0A2D4BL46_PYTIN8.510e-3339.69ADP-ribosylation factor GTPase-activating protein,... [more]
D7TKJ5_VITVI9.420e-3339.30Uncharacterized protein n=1 Tax=Vitis vinifera Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001164Arf GTPase activating proteinPRINTSPR00405REVINTRACTNGcoord: 49..70
score: 37.3
coord: 28..45
score: 57.66
coord: 9..28
score: 49.14
IPR001164Arf GTPase activating proteinSMARTSM00105arf_gap_3coord: 1..117
e-value: 1.6E-35
score: 134.0
IPR001164Arf GTPase activating proteinPFAMPF01412ArfGapcoord: 2..110
e-value: 1.2E-36
score: 125.3
IPR001164Arf GTPase activating proteinPROSITEPS50115ARFGAPcoord: 1..118
score: 25.357
IPR038508ArfGAP domain superfamilyGENE3D3.30.40.160coord: 1..118
e-value: 2.1E-42
score: 146.3
NoneNo IPR availablePANTHERPTHR46220:SF1ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12coord: 2..197
NoneNo IPR availablePANTHERPTHR46220FAMILY NOT NAMEDcoord: 2..197
IPR037278ARFGAP/RecO-like zinc fingerSUPERFAMILY57863ArfGap/RecO-like zinc fingercoord: 2..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14470contigH-paniculata_contig14470:3242..6337 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14470.2687.1mRNA_H-paniculata_contig14470.2687.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14470 3242..6337 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14470.2687.1 ID=prot_H-paniculata_contig14470.2687.1|Name=mRNA_H-paniculata_contig14470.2687.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=203bp
RTLLEREDNKTCADCTAKLPTWASVNIGVFLCTQCSGCHRALGVHISKVL
SVQLDDWTEDRVEFMAGVGNQFANSFLEYHVPGDWLKPSHLEPRKYRESY
IKAKYQDRLFEFRGRKKPVIKPPPPQVGEPGAHEDFVTHGVVSTAALSKH
GMMEYIGFVSIMLSRGKDLVPAGFVGQKHQYMAVLRIGSQEVRTCSVTTI
PE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001164ArfGAP_dom
IPR038508ArfGAP_dom_sf
IPR037278ARFGAP/RecO