mRNA_H-paniculata_contig14470.2687.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14470.2687.1 vs. uniprot
Match: D8LTR5_ECTSI (Arf-GAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTR5_ECTSI) HSP 1 Score: 271 bits (693), Expect = 1.220e-83 Identity = 142/204 (69.61%), Postives = 156/204 (76.47%), Query Frame = 1 Query: 1 RTLLEREDNKTCADCTAKLPTWASVNIGVFLCTQCSGCHRALGVHISKVLSVQLDDWTEDRVEFMAGVGNQFANSFLEYHVPGDWLKPSHLEPRKYRESYIKAKYQDRLFEFRGRKKPVIKPPPPQVGEPGAHEDFVTHGVVSTAALS----------KHGMMEYIGFVSIMLSRGKDLVPAGFVGQKHQYMAVLRIGSQEVRT 582 R+LLEREDN CADCTAKLPTWASVN GVFLCTQC+GCHR+LGVHISKVLSVQLDDWT+ +VEFMAG+GN+ NSFLEYHVP WLKPSHLEPR YR++YIKAKYQ RLFEFRG+KKPVIKPPPP H + GV A HGM EYIGFV+I L RG+ LV AGF GQ QYMAVLRIG QEVR+ Sbjct: 151 RSLLEREDNIVCADCTAKLPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLDDWTKAQVEFMAGMGNKMVNSFLEYHVPSTWLKPSHLEPRDYRDAYIKAKYQSRLFEFRGKKKPVIKPPPPV-----DHASAMVSGVDGDAGGDGSGERGGSGFSHGMTEYIGFVNINLVRGESLVHAGF-GQL-QYMAVLRIGGQEVRS 347
BLAST of mRNA_H-paniculata_contig14470.2687.1 vs. uniprot
Match: A0A6H5L6N3_9PHAE (Arf-GAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6N3_9PHAE) HSP 1 Score: 254 bits (649), Expect = 5.890e-77 Identity = 131/199 (65.83%), Postives = 148/199 (74.37%), Query Frame = 1 Query: 1 RTLLEREDNKTCADCTAKLPTWASVNIGVFLCTQCSGCHRALGVHISKVLSVQLDDWTEDRVEFMAGVGNQFANSFLEYHVPGDWLKPSHLEPRKYRESYIKAKYQDRLFEFRGRKKPVIKPPPP----QVGEPGAHEDFVTHGVVSTAALS-KHGMMEYIGFVSIMLSRGKDLVPAGFVGQKHQYMAVLRIGSQEVRT 582 R+LLERE+N CADCTAKLPTWASVN GVFLCTQC+GCHR+LGVHISKVLSVQLDDWT+ +V+FMAG+GN+ ANSFLEYHVP WLKPSHLEPR YR++YIKAKYQ RLFEFRG+KKPVIKPPPP GA D G HGM EYIGFV+I L+RG+ LV AGF + G QEVR+ Sbjct: 189 RSLLEREENIVCADCTAKLPTWASVNTGVFLCTQCAGCHRSLGVHISKVLSVQLDDWTKAQVDFMAGMGNEMANSFLEYHVPSTWLKPSHLEPRDYRDAYIKAKYQSRLFEFRGKKKPVIKPPPPVDHASAMVSGADGDAGGDGAGERGGSGVSHGMTEYIGFVNINLARGESLVHAGFS----------QAGGQEVRS 377
BLAST of mRNA_H-paniculata_contig14470.2687.1 vs. uniprot
Match: A0A833QKA0_9POAL (Uncharacterized protein n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QKA0_9POAL) HSP 1 Score: 132 bits (333), Expect = 4.180e-34 Identity = 77/196 (39.29%), Postives = 113/196 (57.65%), Query Frame = 1 Query: 7 LLEREDNKTCADCTAKLPTWASVNIGVFLCTQCSGCHRALGVHISKV-LSVQLDDWTEDRVEFMAGVG-NQFANSFLEYHVPGDWLKPSHLEPRKYRESYIKAKYQDRLFEFRGRKKPVIKPPPPQVGEPGAHEDFV--THGVVSTAALSKHGMMEYIGFVSIMLSRGKDLVPAGFVGQKHQYMAVLRIGSQEVRT 582 LL + +N+ CADC A P WAS NIGVF+C +CSG HR+LG HISKV LSV LD+WTED+++ M VG N +AN+ E +P D+ KP+ + R +I+AKY+ + F +KP V + + F HG S + S+ GM+E+IG + I + +G +L F + +L +G Q+ +T Sbjct: 22 LLLKSENRICADCRAPDPKWASANIGVFICVKCSGVHRSLGTHISKVVLSVTLDEWTEDQIDSMLQVGGNSYANTVYEAFLPKDYPKPTANASNEERADFIRAKYETQEF---------LKPSLRIVSSKSSSDSFKDSNHGQASASFKSEVGMIEFIGILEIKVKKGANLAIRDF--RSSDPYVILTLGQQKAQT 206
BLAST of mRNA_H-paniculata_contig14470.2687.1 vs. uniprot
Match: UPI00155A831E (ADP-ribosylation factor GTPase-activating protein AGD12-like n=1 Tax=Vitis riparia TaxID=96939 RepID=UPI00155A831E) HSP 1 Score: 129 bits (324), Expect = 1.660e-33 Identity = 79/201 (39.30%), Postives = 110/201 (54.73%), Query Frame = 1 Query: 7 LLEREDNKTCADCTAKLPTWASVNIGVFLCTQCSGCHRALGVHISKVLSVQLDDWTEDRVEFMAGVG-NQFANSFLEYHVPGDWLKPSHLEPRKYRESYIKAKYQDRLFEFRGRKKPVIKPPPPQVGEPGAHEDF---VTHGVVSTAALSKHGMMEYIGFVSIMLSRGKDLVPAGFVGQKHQYMAVLRIGSQEVRTCSVTT 597 LL + DN+TCADC A P WAS NIGVF+C +C G HR+LG HISKVLSV LDDW++D ++ M VG N ANS E +P KP + R +I++KY+ L EF KP ++ G+ F + S+ + GM+EYIG + + + RGK+L + VL +G Q V+T +T+ Sbjct: 21 LLLKSDNRTCADCGAPDPKWASANIGVFICLKCCGVHRSLGTHISKVLSVALDDWSDDEIDAMVEVGGNSSANSIYEAFIPEGVTKPKPNSSHEERMRFIRSKYE--LQEFL---KPSLRIASVSSGKSSLQSSFSRKLMDNFRSSNSQKLEGMVEYIGLLKVKVIRGKNLAVRDMLSSDPY--VVLTLGPQTVQTQVITS 214
BLAST of mRNA_H-paniculata_contig14470.2687.1 vs. uniprot
Match: J3LAL1_ORYBR (Uncharacterized protein n=14 Tax=Oryzeae TaxID=147380 RepID=J3LAL1_ORYBR) HSP 1 Score: 130 bits (328), Expect = 2.060e-33 Identity = 78/193 (40.41%), Postives = 117/193 (60.62%), Query Frame = 1 Query: 7 LLEREDNKTCADCTAKLPTWASVNIGVFLCTQCSGCHRALGVHISKVLSVQLDDWTEDRVEFMAGVG-NQFANSFLEYHVPGDWLKPSHLEPRKYRESYIKAKYQDRLFEFRGRKKPVIKPPPPQVGEPGAHEDFVTHGVVSTAALSKHGMMEYIGFVSIMLSRGKDLVPAGFVGQKHQYMAVLRIGSQEVRT 582 LL R +N+ CADC+A P WAS NIGVF+C +CSG HR+LG HISKVLSV LD W+++ ++ M VG N AN+ E +P + KP ++ RE++I++KY+ L EF +P ++ Q E G H + +H VS+ S GM+E+IG +++ + G +L + Y+ VL +G Q+V+T Sbjct: 18 LLHRSENRICADCSAPDPKWASANIGVFICLKCSGVHRSLGAHISKVLSVTLDQWSDNEIDNMIEVGGNSHANAIYEAFLPESYSKPHPDSTQEERENFIRSKYE--LQEFL---EPSLRIVSHQSSESGKHAESGSHHSVSSK--SDVGMVEFIGILNVKVKGGTNLAIRD-MSSSDPYV-VLTLGQQKVQT 201
BLAST of mRNA_H-paniculata_contig14470.2687.1 vs. uniprot
Match: A0A2T8KUC3_9POAL (Uncharacterized protein n=1 Tax=Panicum hallii TaxID=206008 RepID=A0A2T8KUC3_9POAL) HSP 1 Score: 128 bits (321), Expect = 2.810e-33 Identity = 80/193 (41.45%), Postives = 110/193 (56.99%), Query Frame = 1 Query: 7 LLEREDNKTCADCTAKLPTWASVNIGVFLCTQCSGCHRALGVHISKVLSVQLDDWTEDRVEFMAGVG-NQFANSFLEYHVPGDWLKPSHLEPRKYRESYIKAKYQDRLFEFRGRKKPVIKPPPPQVGEPGAHEDFVTHGVVSTAALSKHGMMEYIGFVSIMLSRGKDLVPAGFVGQKHQYMAVLRIGSQEVRT 582 LL R +N CADC+A P WAS NIGVF+C +CSG HR+LG HISKVLS LD WTE+ VE M VG N ANS E +P + KP + RE +I++KY+ L EF KP ++ Q + G H H S + S+ GM+E+IG +++ + G +L + Y+ VL +G Q+ +T Sbjct: 20 LLHRSENHICADCSAPDPKWASANIGVFICVKCSGVHRSLGTHISKVLSATLDKWTENEVESMIEVGGNSNANSIYEAFLPEGYQKPHPDSSPEEREKFIRSKYE--LQEFL---KPSLRIVSHQTSDSGKHAGGAPH---SDGSKSEIGMIEFIGILNVKVIGGTNLAIRD-MSSSDPYV-VLTLGHQKAQT 202
BLAST of mRNA_H-paniculata_contig14470.2687.1 vs. uniprot
Match: A0A1W0A2J3_9STRA (ADP-ribosylation factor GTPase-activating protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2J3_9STRA) HSP 1 Score: 132 bits (331), Expect = 3.180e-33 Identity = 76/192 (39.58%), Postives = 108/192 (56.25%), Query Frame = 1 Query: 7 LLEREDNKTCADCTAKLPTWASVNIGVFLCTQCSGCHRALGVHISKVLSVQLDDWTEDRVEFMAGVGNQFANSFLEYHVPGDWLKPSHLEPRKYRESYIKAKYQDRLFEF--RGRKKPVIKPPPPQVGEPGAHEDFVTHGVVSTAALSKHGMMEYIGFVSIMLSRGKDLVPAGFVGQKHQYMAVLRIGSQEV 576 LL E+N CADCTA P WA+V G F+CTQC+G HR+LGVH+S VLS LD WT ++++ +A +GN N LE+ VP + KP+ PR+ RE YI AKY ++ F R++ + P P A V+ ++ HGM+EYIG ++I L G +L G Y++ R+G Q + Sbjct: 45 LLANEENLHCADCTAMHPKWATVTHGGFICTQCAGVHRSLGVHVSFVLSCTLDRWTREQIQHVAAIGNAKLNDTLEFSVPVNIRKPTGDCPREVREEYIVAKYVEQSFRMGPNKRRQEAMSSP----SRPIARN-------VAASSQGSHGMVEYIGILTIELVEGSNLAAMDVGGSSDPYVS-FRLGEQVI 224
BLAST of mRNA_H-paniculata_contig14470.2687.1 vs. uniprot
Match: A0A3B6PLP9_WHEAT (Uncharacterized protein n=5 Tax=Triticum TaxID=4564 RepID=A0A3B6PLP9_WHEAT) HSP 1 Score: 127 bits (318), Expect = 5.930e-33 Identity = 75/193 (38.86%), Postives = 113/193 (58.55%), Query Frame = 1 Query: 7 LLEREDNKTCADCTAKLPTWASVNIGVFLCTQCSGCHRALGVHISKVLSVQLDDWTEDRVEFMAGVG-NQFANSFLEYHVPGDWLKPSHLEPRKYRESYIKAKYQDRLFEFRGRKKPVIKPPPPQVGEPGAHEDFVTHGVVSTAALSKHGMMEYIGFVSIMLSRGKDLVPAGFVGQKHQYMAVLRIGSQEVRT 582 LL+R +N+ CADC+A P WAS NIGVF+C +CSG HR+LG HISKVLSV LD WT+D ++ M VG N AN+ E +P + KP ++ R+++IK+KY+ L EF ++ P G+ ++ S ++ S+ GM+E+IG +++ + G L V Y+ VL +G Q+ +T Sbjct: 7 LLDRSENRICADCSAPDPKWASANIGVFICVKCSGVHRSLGTHISKVLSVTLDKWTDDEIDSMVEVGGNSQANAIYEAFLPEGYRKPHPDSAQEDRQNFIKSKYE--LQEFLEPSLRIVSNHPSNAGKQASNSH-------SGSSKSEIGMVEFIGILNVKVIGGTKLAIRD-VSSSDPYV-VLTLGQQKAQT 188
BLAST of mRNA_H-paniculata_contig14470.2687.1 vs. uniprot
Match: A0A2D4BL46_PYTIN (ADP-ribosylation factor GTPase-activating protein, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BL46_PYTIN) HSP 1 Score: 134 bits (337), Expect = 8.510e-33 Identity = 77/194 (39.69%), Postives = 109/194 (56.19%), Query Frame = 1 Query: 10 LEREDNKTCADCTAKLPTWASVNIGVFLCTQCSGCHRALGVHISKVLSVQLDDWTEDRVEFMAGVGNQFANSFLEYHVPGDWLKPSHLEPRKYRESYIKAKYQDRLFEF---RGRKKPVIKPPPPQVGEPGAHEDFVTHG--VVSTAALSKHGMMEYIGFVSIMLSRGKDLVPAGFVGQKHQYMAVLRIGSQEV 576 ++R +N +CADC A P WASVN G F+CTQC+G HR+LGVH+S VLS LD WT +V+ + VGN N LE+ VP D+ KP R RE +I+AKY+D LF+ + RK+ V+ A + T G V + + + GM+E++G + I L G DL G+ Y+ R+G Q + Sbjct: 513 MQRVENASCADCNAPAPRWASVNHGCFICTQCAGVHRSLGVHVSFVLSCTLDRWTSAQVDGVERVGNDALNETLEFSVPDDYPKPHAESSRPERERFIRAKYEDELFKVSPDKPRKRAVLSSSSSSAPTSYAEDVAATDGNNVAARRSGTGVGMIEFVGVMVIELLEGIDLAGVDINGKSDPYVQ-FRLGEQAI 705
BLAST of mRNA_H-paniculata_contig14470.2687.1 vs. uniprot
Match: D7TKJ5_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=D7TKJ5_VITVI) HSP 1 Score: 129 bits (324), Expect = 9.420e-33 Identity = 79/201 (39.30%), Postives = 110/201 (54.73%), Query Frame = 1 Query: 7 LLEREDNKTCADCTAKLPTWASVNIGVFLCTQCSGCHRALGVHISKVLSVQLDDWTEDRVEFMAGVG-NQFANSFLEYHVPGDWLKPSHLEPRKYRESYIKAKYQDRLFEFRGRKKPVIKPPPPQVGEPGAHEDF---VTHGVVSTAALSKHGMMEYIGFVSIMLSRGKDLVPAGFVGQKHQYMAVLRIGSQEVRTCSVTT 597 LL + DN+TCADC A P WAS NIGVF+C +C G HR+LG HISKVLSV LDDW++D ++ M VG N ANS E +P KP + R +I++KY+ L EF KP ++ G+ F + S+ + GM+EYIG + + + RGK+L + VL +G Q V+T +T+ Sbjct: 21 LLLKSDNRTCADCGAPDPKWASANIGVFICLKCCGVHRSLGTHISKVLSVALDDWSDDEIDAMVEVGGNSSANSIYEAFIPEGVTKPKPNSSHEERMRFIRSKYE--LQEFL---KPSLRIASVSSGKSSLQSSFSRKLMDNFRSSNSQKLEGMVEYIGLLKVKVIRGKNLAVRDMLSSDPY--VVLTLGPQTVQTQVITS 214 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14470.2687.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14470.2687.1 >prot_H-paniculata_contig14470.2687.1 ID=prot_H-paniculata_contig14470.2687.1|Name=mRNA_H-paniculata_contig14470.2687.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=203bp RTLLEREDNKTCADCTAKLPTWASVNIGVFLCTQCSGCHRALGVHISKVLback to top mRNA from alignment at H-paniculata_contig14470:3242..6337+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14470.2687.1 ID=mRNA_H-paniculata_contig14470.2687.1|Name=mRNA_H-paniculata_contig14470.2687.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3096bp|location=Sequence derived from alignment at H-paniculata_contig14470:3242..6337+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14470:3242..6337+ >mRNA_H-paniculata_contig14470.2687.1 ID=mRNA_H-paniculata_contig14470.2687.1|Name=mRNA_H-paniculata_contig14470.2687.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1218bp|location=Sequence derived from alignment at H-paniculata_contig14470:3242..6337+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |