prot_H-paniculata_contig1446.2683.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1446.2683.1
Unique Nameprot_H-paniculata_contig1446.2683.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length700
Homology
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BLAST of mRNA_H-paniculata_contig1446.2683.1 vs. uniprot
Match: A0A6H5JPP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPP0_9PHAE)

HSP 1 Score: 246 bits (629), Expect = 1.260e-65
Identity = 134/249 (53.82%), Postives = 167/249 (67.07%), Query Frame = 0 
Query:  414 GADLTIRFSRALRLARLPSIAAMVLQDGVGLDMDWERRTLWSREMAMVKLQQGETEAAVDFLDNAVEFDRRDLRSLQLMGAVNVVRGSVELGFFYLRMAVNLQRDNIDETFRNIFVEERLDPSLLEGPLNAPQEMLVTRRDWMVIFLGWALEGRWKELGGSVPVLRRVDSFLDRHYSMDSEISFMLGRDLAKRGFEKDAWDHLTRAAAPWNRQVYRVRAALSIPAVSGSRQDLAVAMAALEHGIGRLMP 662
            G +LT+ FS  LR ARLPS+A   L    GL M   +R  W  E A+V LQ G    AV  L +A+ +D  DLR LQ +GA  V +GSV  GF YLR A  LQ+  I   F  I   + LDPS+LE            +R+WM +FLGWAL+G+WK+LGGSV VLRRVD+FL RH+S DSEISFMLGR+L+KRGF+K++W +LT AAAPWNRQ+YR+R+ALSIP V+ S QDLA+AMA LE  + R  P
Sbjct:  219 GFELTVIFSSVLRAARLPSVALDALHGAAGLTMTDRQRAAWETERALVWLQLGRVGEAVVGLKSALGWDAGDLRVLQPLGAALVAQGSVAEGFHYLREAAELQKSRIATVFEQIVRNQGLDPSILETKNR--------KRNWMAMFLGWALQGKWKKLGGSVHVLRRVDNFLRRHFSADSEISFMLGRELSKRGFQKESWHYLTSAAAPWNRQIYRIRSALSIPTVASSEQDLALAMATLEGWLRRQEP 459
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BLAST of mRNA_H-paniculata_contig1446.2683.1 vs. uniprot
Match: D8LAX0_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX0_ECTSI)

HSP 1 Score: 229 bits (584), Expect = 7.710e-60
Identity = 122/213 (57.28%), Postives = 154/213 (72.30%), Query Frame = 0 
Query:  450 RRTLWSREMAMVKLQQGETEAAVDFLDNAVEFDRRDLRSLQLMGAVNVVRGSVELGFFYLRMAVNLQRDNIDETFRNIFVEERLDPSLLEGPLNAPQEMLVTRRDWMVIFLGWALEGRWKELGGSVPVLRRVDSFLDRHYSMDSEISFMLGRDLAKRGFEKDAWDHLTRAAAPWNRQVYRVRAALSIPAVSGSRQDLAVAMAALEHGIGRLMP 662
            +R  W  E A+V LQ G    AV  L +A+ +D  DLR LQ +GA  V +GSV  GF YLR A  LQ+  I   F  I   + LDPS+LE      +E+LVT+R+WM +FLGWAL+G+WK+LGGSV VLRRVD+FL RH+S DSEISFMLGR+L+KRGF+K++W +LT AAAPWNRQ+YR+R+ALSIP V+ S QDLA+AMAALE  + R  P
Sbjct:    5 QRAAWETERALVWLQLGRVGEAVVGLKSALGWDAGDLRVLQPLGAALVAQGSVAEGFRYLREAAELQKSRIATVFEQIVRNQGLDPSVLETKNR--KEVLVTQRNWMAMFLGWALQGKWKKLGGSVHVLRRVDNFLRRHFSADSEISFMLGRELSKRGFQKESWHYLTSAAAPWNRQIYRIRSALSIPTVASSEQDLALAMAALEGWLRRQEP 215
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1446.2683.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JPP0_9PHAE1.260e-6553.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LAX0_ECTSI7.710e-6057.28TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 458..621

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1446contigH-paniculata_contig1446:9634..26256 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1446.2683.1mRNA_H-paniculata_contig1446.2683.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1446 9634..26258 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1446.2683.1 ID=prot_H-paniculata_contig1446.2683.1|Name=mRNA_H-paniculata_contig1446.2683.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=700bp
CSSAGLQTNYLPSHSWGDGTVEAHVMHLLPRFRNIPRTRYACGCSTYSSR
AGQQSQRLRRPHIYLIMFLGLLLAEQPQQRSRATASPAAAAAATTATLTT
EEASTPTVAAVENCRLHSEVLKGDEGCSIPACSSSCSCSSSEVYSMMTCT
HTPSHEEAPDSSTGSNLGIEAARRRPKRRQYRLGRRGIEAARQVLDFRIA
RRFAEEQSNDGTCSSESEDDHLALEVMWGCSYAWIPHDQPNDSLLRREES
RYWQEVAASGNAALGPPDSRPSARAIFKALDTLGSVLRCCPGSMADLEAS
EDFVRYEDDGCDAWSDYYDDVDEDREYCGYDDQDAFMEASNMDDDGDDVV
DDDYDHDHADPHGDPDTSAFPARYRERRLKSCGLLYFDDGNYDDDEDDPD
GGRLFAEKRSRYFGADLTIRFSRALRLARLPSIAAMVLQDGVGLDMDWER
RTLWSREMAMVKLQQGETEAAVDFLDNAVEFDRRDLRSLQLMGAVNVVRG
SVELGFFYLRMAVNLQRDNIDETFRNIFVEERLDPSLLEGPLNAPQEMLV
TRRDWMVIFLGWALEGRWKELGGSVPVLRRVDSFLDRHYSMDSEISFMLG
RDLAKRGFEKDAWDHLTRAAAPWNRQVYRVRAALSIPAVSGSRQDLAVAM
AALEHGIGRLMPPPPALPRPREGLEAAGEMRECGPIGGKVDANGGVIGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf