mRNA_H-paniculata_contig1445.2675.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1445.2675.1
Unique NamemRNA_H-paniculata_contig1445.2675.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig1445.2675.1 vs. uniprot
Match: D8LBR2_ECTSI (Mitogen-activated protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBR2_ECTSI)

HSP 1 Score: 224 bits (572), Expect = 5.080e-65
Identity = 106/160 (66.25%), Postives = 126/160 (78.75%), Query Frame = 1 
Query:    1 FGLARARPKVSQTCGQQQSYPNGDSMTEHVITRWYRPPELMLSPNGHYNFSVDVWSVGCIFGELLGRRPLFPGSSFVEQLSLIFDVIGSPTPAEVEHIRGIQAREFLLQVEGRSRVEFTDLLPGTDADAAGLLDRLLRFSPEKRCTPAEGLRHPFFEEVR 480
            FGLAR    V +   Q+Q   +G+ MTEHV+TRWYRPPELMLSPNG Y F+VD+WSVGCIFGELLGRRPLFPGSSFV QLSLIFDV+G+P P EV HIRG QAR+FL +++G++ V FT++LPG  ADAA LL  LL   P KR TP E LRHPFF+++R
Sbjct:  152 FGLARQLMSVQEKVEQRQ---DGEGMTEHVVTRWYRPPELMLSPNGFYGFAVDLWSVGCIFGELLGRRPLFPGSSFVNQLSLIFDVLGAPAPEEVAHIRGAQARKFLDKLDGKAAVPFTEVLPGIPADAASLLKGLLLLDPVKRFTPREALRHPFFDQLR 308
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BLAST of mRNA_H-paniculata_contig1445.2675.1 vs. uniprot
Match: A0A6H5KC20_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC20_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 4.440e-64
Identity = 104/160 (65.00%), Postives = 126/160 (78.75%), Query Frame = 1 
Query:    1 FGLARARPKVSQTCGQQQSYPNGDSMTEHVITRWYRPPELMLSPNGHYNFSVDVWSVGCIFGELLGRRPLFPGSSFVEQLSLIFDVIGSPTPAEVEHIRGIQAREFLLQVEGRSRVEFTDLLPGTDADAAGLLDRLLRFSPEKRCTPAEGLRHPFFEEVR 480
            FGLAR    V +   Q+Q   +G+ MTEHV+TRWYRPPELMLSPNG Y F+VD+WSVGC+FGELLGRRPLFPGSSFV QLSLIFDV+G+P P EV +IRG QAR+FL +++G++ V FT++LPG  ADAA LL  LL   P KR TP E LRHPFF+++R
Sbjct:  132 FGLARQLISVQEQAEQRQ---DGEGMTEHVVTRWYRPPELMLSPNGFYGFAVDLWSVGCVFGELLGRRPLFPGSSFVNQLSLIFDVLGAPDPGEVAYIRGAQARKFLDKLDGKAAVPFTEVLPGIPADAASLLKGLLLLDPVKRFTPREALRHPFFDQLR 288
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BLAST of mRNA_H-paniculata_contig1445.2675.1 vs. uniprot
Match: A0A7S3XUM8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUM8_HETAK)

HSP 1 Score: 187 bits (474), Expect = 5.270e-55
Identity = 89/160 (55.62%), Postives = 109/160 (68.12%), Query Frame = 1 
Query:    1 FGLARARPKVSQTCGQQQSYPNGDSMTEHVITRWYRPPELMLSPNGHYNFSVDVWSVGCIFGELLGRRPLFPGSSFVEQLSLIFDVIGSPTPAEVEHIRGIQAREFLLQVEGRSRVEFTDLLPGTDADAAGLLDRLLRFSPEKRCTPAEGLRHPFFEEVR 480
            FGLAR +P+     G++      + MTEHV+TRWYRPPELML P+G Y F VD+WS GCIF E+LGR+PLFPG +FV QL+LIFDVIG+P   +V HIR  QAR+FL  V  R RV F +L PG  A A  LL+R L F P  R T  E L HP+F+ +R
Sbjct:  169 FGLARMKPEAQDIHGEEAEE---EPMTEHVVTRWYRPPELMLCPDGLYGFDVDIWSSGCIFAEMLGRKPLFPGKNFVHQLTLIFDVIGAPDAEDVAHIRNSQARKFLDSVADRLRVPFAELFPGATAPAVDLLERFLVFHPANRMTIDECLDHPYFDPLR 325
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BLAST of mRNA_H-paniculata_contig1445.2675.1 vs. uniprot
Match: A0A835Z9A0_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9A0_9STRA)

HSP 1 Score: 182 bits (462), Expect = 4.220e-53
Identity = 87/160 (54.37%), Postives = 111/160 (69.38%), Query Frame = 1 
Query:    1 FGLARARPKVSQTCGQQQSYPNGDSMTEHVITRWYRPPELMLSPNGHYNFSVDVWSVGCIFGELLGRRPLFPGSSFVEQLSLIFDVIGSPTPAEVEHIRGIQAREFLLQVEGRSRVEFTDLLPGTDADAAGLLDRLLRFSPEKRCTPAEGLRHPFFEEVR 480
            FGLAR RP + +  G  +     D MTEHV+TRWYRPPELML P+G Y ++VD+WSVGCIF ELLGR PLFPG++FV+QL+LIFDV+GSP+  EV HIR  QAR FL  + G+ +  +  L P     A  LL+ LL F P KR + A+ L HP+F+ +R
Sbjct:  181 FGLARERP-LGRGAGPDEEVD--DPMTEHVVTRWYRPPELMLCPDGLYTYAVDLWSVGCIFAELLGRAPLFPGTNFVDQLTLIFDVVGSPSQHEVAHIRNNQARRFLDSMAGKDKQPYAALFPQASEQAIDLLEHLLVFDPPKRLSVADALDHPYFDALR 337
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BLAST of mRNA_H-paniculata_contig1445.2675.1 vs. uniprot
Match: D8LJT1_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJT1_ECTSI)

HSP 1 Score: 176 bits (446), Expect = 1.830e-50
Identity = 85/161 (52.80%), Postives = 109/161 (67.70%), Query Frame = 1 
Query:    1 FGLARARPKVSQTCGQQQ-SYPNGDSMTEHVITRWYRPPELMLSPNGHYNFSVDVWSVGCIFGELLGRRPLFPGSSFVEQLSLIFDVIGSPTPAEVEHIRGIQAREFLLQVEGRSRVEFTDLLPGTDADAAGLLDRLLRFSPEKRCTPAEGLRHPFFEEVR 480
            FGLAR RP    T    +  +P    MTEHV+TRWYRPPELML P+G Y ++VD+WSVGCIF ELLGR PLFPG +F++QL+LIFD++GSP P EV HIR  QA++FL  ++ R +V + +L  G    A  LL+ LL F P  R +  E L HP+F  +R
Sbjct:  208 FGLARLRPMGRGTNPDDEVDHP----MTEHVVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAELLGRHPLFPGKNFMDQLTLIFDLVGSPKPHEVSHIRNSQAKKFLETMQDRVKVPYAELFAGASEHAIDLLEGLLVFHPPCRLSVDEALEHPYFHPLR 364
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BLAST of mRNA_H-paniculata_contig1445.2675.1 vs. uniprot
Match: A0A4D9DEH4_9STRA (Protein kinase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DEH4_9STRA)

HSP 1 Score: 182 bits (461), Expect = 4.250e-50
Identity = 87/160 (54.37%), Postives = 108/160 (67.50%), Query Frame = 1 
Query:    1 FGLARARPKVSQTCGQQQSYPNGDSMTEHVITRWYRPPELMLSPNGHYNFSVDVWSVGCIFGELLGRRPLFPGSSFVEQLSLIFDVIGSPTPAEVEHIRGIQAREFLLQVEGRSRVEFTDLLPGTDADAAGLLDRLLRFSPEKRCTPAEGLRHPFFEEVR 480
            FGLARARP      GQ       + MTEHV+TRWYRPPELML P+G Y+++VD+WSVGCIF ELLGR+PLFPG +FV QL+LIFDVIG+P P EV H++  QA+ FL  V  + +V F  L P    +A  LL+ LL F P  R T  + L H +FE +R
Sbjct:  180 FGLARARPAGK---GQNPDDSIEEPMTEHVVTRWYRPPELMLCPDGLYDYAVDMWSVGCIFAELLGRKPLFPGKNFVHQLTLIFDVIGAPRPQEVAHVKSSQAKRFLDSVAAKKKVPFATLFPEASREALSLLNSLLVFEPAHRLTVDQALGHKYFEPLR 336
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BLAST of mRNA_H-paniculata_contig1445.2675.1 vs. uniprot
Match: A0A7S1XRS6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRS6_9STRA)

HSP 1 Score: 171 bits (433), Expect = 8.340e-47
Identity = 86/162 (53.09%), Postives = 105/162 (64.81%), Query Frame = 1 
Query:    1 FGLARARPKVSQTCGQQQSYPNG---DSMTEHVITRWYRPPELMLSPNGHYNFSVDVWSVGCIFGELLGRRPLFPGSSFVEQLSLIFDVIGSPTPAEVEHIRGIQAREFLLQVEGRSRVEFTDLLPGTDADAAGLLDRLLRFSPEKRCTPAEGLRHPFFEEV 477
            FGLAR RP      G ++  P+    D MTEHV+TRWYRPPELML P+G Y ++VD+WS GCI  ELLGRRPLFPG +FV QL LIFDVIG+P   EV HIR  QAR FL  V+ + RV F  L P +   A  L+ RLL F  +KR    + + H FF+ +
Sbjct:  203 FGLARERPS-----GPRRDTPDEGVIDPMTEHVVTRWYRPPELMLCPDGLYTYAVDLWSCGCILAELLGRRPLFPGKNFVHQLQLIFDVIGAPRSEEVAHIRSSQARRFLQTVQEKRRVPFAVLYPNSSPAAHDLIGRLLVFDEKKRLGTDKAMAHSFFDPL 359
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BLAST of mRNA_H-paniculata_contig1445.2675.1 vs. uniprot
Match: A0A421FNC0_9STRA (Protein kinase domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FNC0_9STRA)

HSP 1 Score: 166 bits (419), Expect = 8.380e-47
Identity = 80/172 (46.51%), Postives = 103/172 (59.88%), Query Frame = 1 
Query:    1 FGLARARPKVSQTCGQQQSYPNG-------------DSMTEHVITRWYRPPELMLSPNGHYNFSVDVWSVGCIFGELLGRRPLFPGSSFVEQLSLIFDVIGSPTPAEVEHIRGIQAREFLLQVEGRSRVEFTDLLPGTDADAAGLLDRLLRFSPEKRCTPAEGLRHPFFEEV 477
            FGLAR  P+   T       P                 MTEHV+TRWYR PELML P+G Y+ SVD+WSVGCIF E+LGR+ LFPG +F+ QL+LIFDVIG+P P     I+  QA+ FL  ++ +S+V F  L P     A  LLDRLL F P KR +  + L HP+ +++
Sbjct:  181 FGLARKIPRCVATSSNLPERPRSAPAMSSNARVSDRPPMTEHVVTRWYRAPELMLQPDGLYDQSVDMWSVGCIFAEILGRKALFPGKNFLHQLTLIFDVIGAPPPEATTRIQSSQAQRFLRSLDRKSKVPFRTLFPNASEAAVDLLDRLLEFDPAKRISAQDALAHPYMQDI 352
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BLAST of mRNA_H-paniculata_contig1445.2675.1 vs. uniprot
Match: A0A418BA58_9STRA (Protein kinase domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418BA58_9STRA)

HSP 1 Score: 165 bits (418), Expect = 9.900e-47
Identity = 80/168 (47.62%), Postives = 108/168 (64.29%), Query Frame = 1 
Query:    1 FGLARARPKVSQTCGQQQSY-----PNGDS----MTEHVITRWYRPPELMLSPNGHYNFSVDVWSVGCIFGELLGRRPLFPGSSFVEQLSLIFDVIGSPTPAEVEHIRGIQAREFLLQVEGRSRVEFTDLLPGTDADAAGLLDRLLRFSPEKRCTPAEGLRHPFFEEV 477
            FGLAR+ PK + +  +  S         DS    MTEHV+TRWYR PELML P+G YN  VD+WSVGCIF E+LGR+  FPG +F+ QL+LIFDVIG+P   +V+ ++  QA+ F+  +  +++V F  L P    DA  LLD+LL+F P  RCT  E L HP+ + +
Sbjct:  200 FGLARSVPKRTISKPRPASAGPTKKDTADSDWQPMTEHVVTRWYRAPELMLQPDGQYNTGVDMWSVGCIFAEILGRKAFFPGKNFIHQLTLIFDVIGTPCTNDVKKMKSTQAQRFIKSLGKKAKVPFRTLFPTASPDAIDLLDKLLQFDPTARCTVDEALAHPYMQGI 367
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BLAST of mRNA_H-paniculata_contig1445.2675.1 vs. uniprot
Match: A0A3L6V279_9STRA (Protein kinase domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V279_9STRA)

HSP 1 Score: 163 bits (413), Expect = 2.050e-46
Identity = 74/168 (44.05%), Postives = 108/168 (64.29%), Query Frame = 1 
Query:    1 FGLARA---------RPKVSQTCGQQQSYPNGDSMTEHVITRWYRPPELMLSPNGHYNFSVDVWSVGCIFGELLGRRPLFPGSSFVEQLSLIFDVIGSPTPAEVEHIRGIQAREFLLQVEGRSRVEFTDLLPGTDADAAGLLDRLLRFSPEKRCTPAEGLRHPFFEEV 477
            FGLAR+         RP  +    ++   P+   MTEH++TRWYR PELML P+G Y+  VD+WSVGCIF E+LGR+ +FPG +F+ QL+LIFDVIG+P   +V+ ++  QA+ F+  +  +++V F  L P    DA  LL++LL+F P  RC+  E L HP+ + +
Sbjct:  131 FGLARSVPKRAPPKPRPASAGPTKKEPPEPDWQPMTEHIVTRWYRAPELMLQPDGQYSTGVDMWSVGCIFAEILGRKAVFPGKNFIHQLTLIFDVIGTPCGNDVKKMKSSQAQRFIKSLGKKAKVPFRTLFPTASPDAIDLLEKLLQFDPHTRCSVDEALAHPYMQGI 298
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1445.2675.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBR2_ECTSI5.080e-6566.25Mitogen-activated protein kinase n=1 Tax=Ectocarpu... [more]
A0A6H5KC20_9PHAE4.440e-6465.00Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A7S3XUM8_HETAK5.270e-5555.63Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A835Z9A0_9STRA4.220e-5354.38Kinase-like domain-containing protein n=1 Tax=Trib... [more]
D8LJT1_ECTSI1.830e-5052.80Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A4D9DEH4_9STRA4.250e-5054.38Protein kinase domain-containing protein n=2 Tax=M... [more]
A0A7S1XRS6_9STRA8.340e-4753.09Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A421FNC0_9STRA8.380e-4746.51Protein kinase domain-containing protein n=4 Tax=P... [more]
A0A418BA58_9STRA9.900e-4747.62Protein kinase domain-containing protein n=1 Tax=A... [more]
A0A3L6V279_9STRA2.050e-4644.05Protein kinase domain-containing protein n=5 Tax=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1445contigH-paniculata_contig1445:10125..11451 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score175.6
Seed ortholog evalue1.8e-41
Seed eggNOG ortholog2880.D8LJT1
Preferred nameMPK11
KEGG koko:K04371,ko:K08293,ko:K14512
KEGG Pathwayko01521,ko01522,ko01524,ko04010,ko04011,ko04012,ko04013,ko04014,ko04015,ko04016,ko04022,ko04024,ko04062,ko04066,ko04068,ko04071,ko04072,ko04075,ko04114,ko04140,ko04150,ko04151,ko04210,ko04214,ko04218,ko04261,ko04270,ko04320,ko04350,ko04360,ko04370,ko04371,ko04380,ko04510,ko04520,ko04540,ko04550,ko04611,ko04620,ko04621,ko04650,ko04657,ko04658,ko04659,ko04660,ko04662,ko04664,ko04666,ko04668,ko04713,ko04720,ko04722,ko04723,ko04724,ko04725,ko04726,ko04730,ko04810,ko04910,ko04912,ko04914,ko04915,ko04916,ko04917,ko04919,ko04921,ko04926,ko04930,ko04933,ko04934,ko04960,ko05010,ko05020,ko05034,ko05131,ko05132,ko05133,ko05140,ko05142,ko05145,ko05152,ko05160,ko05161,ko05164,ko05165,ko05167,ko05200,ko05203,ko05205,ko05210,ko05211,ko05212,ko05213,ko05214,ko05215,ko05216,ko05218,ko05219,ko05220,ko05221,ko05223,ko05224,ko05225,ko05226,ko05230,ko05231,map01521,map01522,map01524,map04010,map04011,map04012,map04013,map04014,map04015,map04016,map04022,map04024,map04062,map04066,map04068,map04071,map04072,map04075,map04114,map04140,map04150,map04151,map04210,map04214,map04218,map04261,map04270,map04320,map04350,map04360,map04370,map04371,map04380,map04510,map04520,map04540,map04550,map04611,map04620,map04621,map04650,map04657,map04658,map04659,map04660,map04662,map04664,map04666,map04668,map04713,map04720,map04722,map04723,map04724,map04725,map04726,map04730,map04810,map04910,map04912,map04914,map04915,map04916,map04917,map04919,map04921,map04926,map04930,map04933,map04934,map04960,map05010,map05020,map05034,map05131,map05132,map05133,map05140,map05142,map05145,map05152,map05160,map05161,map05164,map05165,map05167,map05200,map05203,map05205,map05210,map05211,map05212,map05213,map05214,map05215,map05216,map05218,map05219,map05220,map05221,map05223,map05224,map05225,map05226,map05230,map05231
KEGG ModuleM00687
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000165,GO:0000749,GO:0000750,GO:0003006,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004707,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007049,GO:0007154,GO:0007165,GO:0007186,GO:0008150,GO:0008152,GO:0009272,GO:0009653,GO:0009987,GO:0010033,GO:0010468,GO:0010927,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019222,GO:0019236,GO:0019538,GO:0019953,GO:0022402,GO:0022413,GO:0022414,GO:0022603,GO:0022607,GO:0023014,GO:0023052,GO:0030154,GO:0030435,GO:0030437,GO:0030476,GO:0031136,GO:0031137,GO:0031139,GO:0031505,GO:0032005,GO:0032502,GO:0032505,GO:0032989,GO:0034293,GO:0035556,GO:0036211,GO:0042173,GO:0042174,GO:0042221,GO:0042244,GO:0042546,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043900,GO:0043902,GO:0043934,GO:0043935,GO:0043937,GO:0043939,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0045229,GO:0045595,GO:0045596,GO:0046777,GO:0046999,GO:0048468,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051321,GO:0051704,GO:0051716,GO:0060255,GO:0065007,GO:0070590,GO:0070591,GO:0070726,GO:0070887,GO:0071310,GO:0071444,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071852,GO:0071940,GO:0140096,GO:1901564,GO:1903046,GO:2000241,GO:2000243
EggNOG free text desc.MAP kinase activity
EggNOG OGsKOG0660@1,KOG0660@2759
EC2.7.11.24
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03036,ko04147
Exons3
Model size484
Cds size483
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1445.2675.1prot_H-paniculata_contig1445.2675.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1445 10125..11451 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929152.2373989-CDS-H-paniculata_contig1445:10124..102081622929152.2373989-CDS-H-paniculata_contig1445:10124..10208Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1445 10125..10208 +
1691480750.69232-CDS-H-paniculata_contig1445:10124..102081691480750.69232-CDS-H-paniculata_contig1445:10124..10208Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1445 10125..10208 +
1622929152.250345-CDS-H-paniculata_contig1445:10605..107381622929152.250345-CDS-H-paniculata_contig1445:10605..10738Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1445 10606..10738 +
1691480750.7043955-CDS-H-paniculata_contig1445:10605..107381691480750.7043955-CDS-H-paniculata_contig1445:10605..10738Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1445 10606..10738 +
1622929152.2644134-CDS-H-paniculata_contig1445:11185..114511622929152.2644134-CDS-H-paniculata_contig1445:11185..11451Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1445 11186..11451 +
1691480750.7156007-CDS-H-paniculata_contig1445:11185..114511691480750.7156007-CDS-H-paniculata_contig1445:11185..11451Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1445 11186..11451 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1445.2675.1

>prot_H-paniculata_contig1445.2675.1 ID=prot_H-paniculata_contig1445.2675.1|Name=mRNA_H-paniculata_contig1445.2675.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=161bp
FGLARARPKVSQTCGQQQSYPNGDSMTEHVITRWYRPPELMLSPNGHYNF
SVDVWSVGCIFGELLGRRPLFPGSSFVEQLSLIFDVIGSPTPAEVEHIRG
IQAREFLLQVEGRSRVEFTDLLPGTDADAAGLLDRLLRFSPEKRCTPAEG
LRHPFFEEVR*
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mRNA from alignment at H-paniculata_contig1445:10125..11451+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1445.2675.1 ID=mRNA_H-paniculata_contig1445.2675.1|Name=mRNA_H-paniculata_contig1445.2675.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1327bp|location=Sequence derived from alignment at H-paniculata_contig1445:10125..11451+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTCGGGCTTGCACGAGCGCGACCGAAGGTCTCTCAGACATGTGGCCAGCA
ACAATCGTATCCCAATGGAGATAGCATGACCGAGGTAATTAGTACACGAT
CGCTGTGAGAATGGTGGTTTGGGGGCGACATTCCAAGGATTGTGCTATTT
TCGCGCGCGAATAATCGAAAGGACGTACATGGCAGATGCAAGGGCAATCG
GTCCCTGGTCGCCAGCTGTAGTATCTCGCCTGTCGTTGGAATATCTGCAC
GACAGTAATTGGTAACTTTAATCCATCAAGCCCGTGGCCAAGCCTGTGAC
CAAAGAGCACGATCGCGTACTTGTAGTTGTACAGTTGGCCACGGTGGCTA
ACTATCTAGTAAAGCATGACCAACAACCGCATCCGCCCCCCGCGCTCTCA
TTTCTACGTCTGGCCTTCCGCGGTGCTTCCTCTGGTTGACCTCCTCGCCC
CGCATGGGTCGCGCCCCCTCTGGCCATGCAGCATGTAATAACGCGCTGGT
ACCGACCCCCGGAATTGATGCTCTCCCCGAACGGTCACTACAACTTTTCA
GTAGACGTGTGGTCGGTCGGCTGTATATTCGGAGAGCTCCTGGGCCGTCG
TCCGCTGTTTCCAGGTGAGGGACATATAAGCAAAATAATTTTCTCACACC
TCAAAAACAGATCACATGTCTCCATTGGCATTCATGAAAAACATAGCGTG
CATAACCATGCGACCAAGACCTAGAGGACAGTGTTTTGTTTAGGTTTCCA
GAGGCAGGCTTTCAAGGCCCTCTACATGTCGGCCATACGGGGTCATATGT
TGTTGTTGTTGCGTACACTTCTCTTATCGATTTCCTAACTTTAGTAAATC
CCATCACCACAGTTCTTTGTACAGTGCGCCCATAACAACAAAAACCACGG
TCTTTGCGCCATATCGGGCTCAAGGCCATTTTACGTCAGTGTATTTTCAG
CGCACGTATGGCTTTGGGCACATTTGTACTGCAACAATCCCCCTCTTTGC
GTGCACTTGCTCTCACTCCTCCTCATTGCCTCGCCCATCTTTCGTAAATT
CTCACATTAAGGGTCGAGCTTCGTGGAGCAGCTTTCACTTATATTCGACG
TCATTGGCTCCCCCACGCCGGCTGAAGTGGAACACATTCGCGGAATACAG
GCGCGCGAGTTTTTGCTCCAGGTGGAAGGCAGGTCGCGCGTCGAATTTAC
CGACTTGCTGCCGGGAACGGATGCGGACGCCGCTGGCCTTCTTGATCGTT
TGTTACGCTTCAGCCCAGAGAAACGGTGTACGCCGGCGGAGGGACTACGC
CATCCATTCTTCGAGGAGGTCAGGTAA
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Coding sequence (CDS) from alignment at H-paniculata_contig1445:10125..11451+

>mRNA_H-paniculata_contig1445.2675.1 ID=mRNA_H-paniculata_contig1445.2675.1|Name=mRNA_H-paniculata_contig1445.2675.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=966bp|location=Sequence derived from alignment at H-paniculata_contig1445:10125..11451+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTCGGGCTTGCACGAGCGCGACCGAAGGTCTCTCAGACATGTGGCCAGCA
ACAATCGTATCCCAATGGAGATAGCATGACCGAGTTCGGGCTTGCACGAG
CGCGACCGAAGGTCTCTCAGACATGTGGCCAGCAACAATCGTATCCCAAT
GGAGATAGCATGACCGAGCATGTAATAACGCGCTGGTACCGACCCCCGGA
ATTGATGCTCTCCCCGAACGGTCACTACAACTTTTCAGTAGACGTGTGGT
CGGTCGGCTGTATATTCGGAGAGCTCCTGGGCCGTCGTCCGCTGTTTCCA
GCATGTAATAACGCGCTGGTACCGACCCCCGGAATTGATGCTCTCCCCGA
ACGGTCACTACAACTTTTCAGTAGACGTGTGGTCGGTCGGCTGTATATTC
GGAGAGCTCCTGGGCCGTCGTCCGCTGTTTCCAGGGTCGAGCTTCGTGGA
GCAGCTTTCACTTATATTCGACGTCATTGGCTCCCCCACGCCGGCTGAAG
TGGAACACATTCGCGGAATACAGGCGCGCGAGTTTTTGCTCCAGGTGGAA
GGCAGGTCGCGCGTCGAATTTACCGACTTGCTGCCGGGAACGGATGCGGA
CGCCGCTGGCCTTCTTGATCGTTTGTTACGCTTCAGCCCAGAGAAACGGT
GTACGCCGGCGGAGGGACTACGCCATCCATTCTTCGAGGAGGTCAGGTAA
GGTCGAGCTTCGTGGAGCAGCTTTCACTTATATTCGACGTCATTGGCTCC
CCCACGCCGGCTGAAGTGGAACACATTCGCGGAATACAGGCGCGCGAGTT
TTTGCTCCAGGTGGAAGGCAGGTCGCGCGTCGAATTTACCGACTTGCTGC
CGGGAACGGATGCGGACGCCGCTGGCCTTCTTGATCGTTTGTTACGCTTC
AGCCCAGAGAAACGGTGTACGCCGGCGGAGGGACTACGCCATCCATTCTT
CGAGGAGGTCAGGTAA
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