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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1765 |
| Cds size | 1395 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1445.2678.1 >prot_H-paniculata_contig1445.2678.1 ID=prot_H-paniculata_contig1445.2678.1|Name=mRNA_H-paniculata_contig1445.2678.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=465bp
MSRRKSIAGFVSGGNRWEDTGGVTRAGEVENGSGRWWSGALWPSIMTVPL
QISSATGGYDRDRSGMAKETKGERGYDLFVSGEFDGATKDIFCVSDDGSR
SPDVFLSHSSKILRREREARAWQVVHDAVAQRQAEATVDTAGLAASGPRS
GPRTATAPRSILRNDRDETGETVAPVSANFRLPSSSRNLRSAPANIWSRS
LSYAVIPNTNGNMDRTATPRKKVASITFATAAAVNECGEHDNRSTILSEE
ATITVSHTKLMEEKQRESGRARIGTEEVALWRRGSVGVSYEHTSMGHVQK
YIPSVNTDVNKTTTHSRPASDGCGSTSATTTGPMRAPIASVYLRQLSEAS
SHGSPPPVPPPLRQRWKHEKCRSTGSLAVLKGATSDTNNHRGVALKAEHE
NIPQPAVGPGSEANGVFESQCIDRTVEEEAIMSSGCSEPIALRSGSRTVR
QVVQGEEGSRRNRR* back to topmRNA from alignment at H-paniculata_contig1445:17984..19776+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1445.2678.1 ID=mRNA_H-paniculata_contig1445.2678.1|Name=mRNA_H-paniculata_contig1445.2678.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1793bp|location=Sequence derived from alignment at H-paniculata_contig1445:17984..19776+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACGAGCTAAAAGGTCACGACAGCCTCGGTACGGTCGGAACTACGGTCAG
AAAATCAAGCTTCCGTGGCAACCCTTTCACAGGAGAGCCACCTTATGGTG
AGAATTCGACCTTCCAGGCTACGGAACTCTCAGAGCCCATGTCGAGACGA
AAATCTATCGCCGGTTTTGTGTCGGGCGGCAACAGATGGGAGGACACCGG
CGGAGTCACCCGCGCAGGAGAGGTTGAAAACGGATCAGGGCGCTGGTGGT
CTGGAGCTCTCTGGCCCTCAATAATGACGGTACCCCTTCAGATATCGTCA
GCTACTGGGGGCTATGATCGCGACCGCTCGGGTATGGCCAAAGAGACAAA
GGGCGAGCGTGGGTACGACCTATTTGTCAGTGGTGAGTTTGATGGGGCAA
CGAAGGACATTTTTTGCGTTAGCGATGACGGCAGCAGGAGCCCCGACGTT
TTCTTGAGCCATTCTTCCAAAATACTCAGACGTGAGAGAGAGGCGCGAGC
GTGGCAGGTGGTCCATGATGCGGTGGCCCAAAGGCAGGCCGAGGCAACAG
TAGACACTGCTGGATTGGCAGCGAGTGGACCTCGTTCAGGCCCCCGCACA
GCCACCGCACCCCGTAGTATTCTTCGCAACGACAGAGACGAGACTGGGGA
GACCGTGGCACCAGTGAGCGCGAATTTCCGTTTGCCATCTTCTTCTCGGA
ACCTTCGTTCGGCTCCCGCTAATATTTGGAGTCGTTCATTGAGTTACGCC
GTTATTCCAAACACGAACGGTAATATGGACCGAACGGCTACGCCACGAAA
AAAAGTAGCATCTATCACTTTCGCCACCGCAGCAGCAGTAAACGAATGCG
GTGAACACGACAATCGTTCAACAATACTGTCAGAGGAAGCCACCATAACT
GTCTCCCACACGAAGCTTATGGAAGAGAAACAAAGAGAAAGTGGCCGGGC
TCGGATTGGCACTGAGGAAGTTGCTCTCTGGAGACGAGGATCCGTTGGCG
TTTCGTACGAACATACGTCGATGGGACACGTACAGAAATATATCCCCAGC
GTAAACACTGATGTGAATAAGACTACGACTCACAGTCGACCTGCCAGCGA
TGGTTGTGGTAGCACGTCCGCCACAACCACGGGTCCGATGCGCGCGCCGA
TTGCCTCTGTCTACTTACGTCAACTATCCGAGGCATCGTCCCACGGCAGC
CCACCTCCCGTTCCGCCTCCGCTTCGGCAACGCTGGAAACATGAAAAATG
TCGTTCTACAGGCTCCTTAGCCGTTCTGAAGGGGGCAACGTCCGACACAA
ATAATCATCGAGGGGTCGCCCTGAAAGCAGAACACGAAAACATACCACAA
CCTGCCGTAGGCCCCGGTAGTGAGGCCAATGGGGTATTCGAGTCCCAATG
TATTGACAGAACCGTAGAGGAGGAAGCTATCATGTCCTCGGGATGCTCGG
AGCCAATCGCTCTGAGATCGGGATCGCGAACCGTCAGGCAAGTTGTCCAA
GGAGAACTTTCGACTTGCCTCCTGCCGAAAGATGGAAGGCAGTCGACGCA
ATCGGCGGTGACGGTGGCGGTAATGGCGACGGCATCATCGCCTACATCGG
CGACAATAGAAGTCACAACGGGCGATCGACCATATTCAGCGACCGCGGAG
TCCGATTCGTGTTCACGAATTGACGACGTGTCTAAATCATTCAGAAACAG
CGAACACGGCATCTCCCGCGAGGGACTGACTCGAGTCTTTGACTGTCACA
CATCCCGTTTGTCAAAGAGGAAAGCGGCAAGAGTGGGAACGAC back to topCoding sequence (CDS) from alignment at H-paniculata_contig1445:17984..19776+ >mRNA_H-paniculata_contig1445.2678.1 ID=mRNA_H-paniculata_contig1445.2678.1|Name=mRNA_H-paniculata_contig1445.2678.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2790bp|location=Sequence derived from alignment at H-paniculata_contig1445:17984..19776+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGAGACGAAAATCTATCGCCGGTTTTGTGTCGGGCGGCAACAGATG
GGAGGACACCGGCGGAGTCACCCGCGCAGGAGAGGTTGAAAACGGATCAG
GGCGCTGGTGGTCTGGAGCTCTCTGGCCCTCAATAATGACGGTACCCCTT
CAGATATCGTCAGCTACTGGGGGCTATGATCGCGACCGCTCGGGTATGGC
CAAAGAGACAAAGGGCGAGCGTGGGTACGACCTATTTGTCAGTGGTGAGT
TTGATGGGGCAACGAAGGACATTTTTTGCGTTAGCGATGACGGCAGCAGG
AGCCCCGACGTTTTCTTGAGCCATTCTTCCAAAATACTCAGACGTGAGAG
AGAGGCGCGAGCGTGGCAGGTGGTCCATGATGCGGTGGCCCAAAGGCAGG
CCGAGGCAACAGTAGACACTGCTGGATTGGCAGCGAGTGGACCTCGTTCA
GGCCCCCGCACAGCCACCGCACCCCGTAGTATTCTTCGCAACGACAGAGA
CGAGACTGGGGAGACCGTGGCACCAGTGAGCGCGAATTTCCGTTTGCCAT
CTTCTTCTCGGAACCTTCGTTCGGCTCCCGCTAATATTTGGAGTCGTTCA
TTGAGTTACGCCGTTATTCCAAACACGAACGGTAATATGGACCGAACGGC
TACGCCACGAAAAAAAGTAGCATCTATCACTTTCGCCACCGCAGCAGCAG
TAAACGAATGCGGTGAACACGACAATCGTTCAACAATACTGTCAGAGGAA
GCCACCATAACTGTCTCCCACACGAAGCTTATGGAAGAGAAACAAAGAGA
AAGTGGCCGGGCTCGGATTGGCACTGAGGAAGTTGCTCTCTGGAGACGAG
GATCCGTTGGCGTTTCGTACGAACATACGTCGATGGGACACGTACAGAAA
TATATCCCCAGCGTAAACACTGATGTGAATAAGACTACGACTCACAGTCG
ACCTGCCAGCGATGGTTGTGGTAGCACGTCCGCCACAACCACGGGTCCGA
TGCGCGCGCCGATTGCCTCTGTCTACTTACGTCAACTATCCGAGGCATCG
TCCCACGGCAGCCCACCTCCCGTTCCGCCTCCGCTTCGGCAACGCTGGAA
ACATGAAAAATGTCGTTCTACAGGCTCCTTAGCCGTTCTGAAGGGGGCAA
CGTCCGACACAAATAATCATCGAGGGGTCGCCCTGAAAGCAGAACACGAA
AACATACCACAACCTGCCGTAGGCCCCGGTAGTGAGGCCAATGGGGTATT
CGAGTCCCAATGTATTGACAGAACCGTAGAGGAGGAAGCTATCATGTCCT
CGGGATGCTCGGAGCCAATCGCTCTGAGATCGGGATCGCGAACCGTCAGG
CAAGTTGTCCAAGGAGAATGTCGAGACGAAAATCTATCGCCGGTTTTGTG
TCGGGCGGCAACAGATGGGAGGACACCGGCGGAGTCACCCGCGCAGGAGA
GGTTGAAAACGGATCAGGGCGCTGGTGGTCTGGAGCTCTCTGGCCCTCAA
TAATGACGGTACCCCTTCAGATATCGTCAGCTACTGGGGGCTATGATCGC
GACCGCTCGGGTATGGCCAAAGAGACAAAGGGCGAGCGTGGGTACGACCT
ATTTGTCAGTGGTGAGTTTGATGGGGCAACGAAGGACATTTTTTGCGTTA
GCGATGACGGCAGCAGGAGCCCCGACGTTTTCTTGAGCCATTCTTCCAAA
ATACTCAGACGTGAGAGAGAGGCGCGAGCGTGGCAGGTGGTCCATGATGC
GGTGGCCCAAAGGCAGGCCGAGGCAACAGTAGACACTGCTGGATTGGCAG
CGAGTGGACCTCGTTCAGGCCCCCGCACAGCCACCGCACCCCGTAGTATT
CTTCGCAACGACAGAGACGAGACTGGGGAGACCGTGGCACCAGTGAGCGC
GAATTTCCGTTTGCCATCTTCTTCTCGGAACCTTCGTTCGGCTCCCGCTA
ATATTTGGAGTCGTTCATTGAGTTACGCCGTTATTCCAAACACGAACGGT
AATATGGACCGAACGGCTACGCCACGAAAAAAAGTAGCATCTATCACTTT
CGCCACCGCAGCAGCAGTAAACGAATGCGGTGAACACGACAATCGTTCAA
CAATACTGTCAGAGGAAGCCACCATAACTGTCTCCCACACGAAGCTTATG
GAAGAGAAACAAAGAGAAAGTGGCCGGGCTCGGATTGGCACTGAGGAAGT
TGCTCTCTGGAGACGAGGATCCGTTGGCGTTTCGTACGAACATACGTCGA
TGGGACACGTACAGAAATATATCCCCAGCGTAAACACTGATGTGAATAAG
ACTACGACTCACAGTCGACCTGCCAGCGATGGTTGTGGTAGCACGTCCGC
CACAACCACGGGTCCGATGCGCGCGCCGATTGCCTCTGTCTACTTACGTC
AACTATCCGAGGCATCGTCCCACGGCAGCCCACCTCCCGTTCCGCCTCCG
CTTCGGCAACGCTGGAAACATGAAAAATGTCGTTCTACAGGCTCCTTAGC
CGTTCTGAAGGGGGCAACGTCCGACACAAATAATCATCGAGGGGTCGCCC
TGAAAGCAGAACACGAAAACATACCACAACCTGCCGTAGGCCCCGGTAGT
GAGGCCAATGGGGTATTCGAGTCCCAATGTATTGACAGAACCGTAGAGGA
GGAAGCTATCATGTCCTCGGGATGCTCGGAGCCAATCGCTCTGAGATCGG
GATCGCGAACCGTCAGGCAAGTTGTCCAAGGAGAGGAAGGCAGTCGACGC
AATCGGCGGTGAGGAAGGCAGTCGACGCAATCGGCGGTGA back to top
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