prot_H-paniculata_contig14444.2673.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14444.2673.1
Unique Nameprot_H-paniculata_contig14444.2673.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length106
Homology
BLAST of mRNA_H-paniculata_contig14444.2673.1 vs. uniprot
Match: D7FQ38_ECTSI (Dynein light chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ38_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 7.770e-62
Identity = 91/105 (86.67%), Postives = 99/105 (94.29%), Query Frame = 0
Query:    1 MADIDEQAAAEGQETFTERKIDVLVAEIPENLQQKATKRVCMAMDKYCIEKDIATDIKKHFDEECEGSWHCVTGRSFGCSVTHETKHLFFFKCDQMFVLLFCSPE 105
            MAD DEQAA+E QE+ TERKI+VL+AEIPE LQQKA +RVC+AMDKY IEKDIATD+KKHFDEECEGSWHCV+GRSFGCSVTHETKHLFFFKCDQMFVLLFCSPE
Sbjct:    1 MAD-DEQAASEAQESVTERKIEVLIAEIPEELQQKAKRRVCLAMDKYDIEKDIATDVKKHFDEECEGSWHCVSGRSFGCSVTHETKHLFFFKCDQMFVLLFCSPE 104          
BLAST of mRNA_H-paniculata_contig14444.2673.1 vs. uniprot
Match: A0A7S2RLM3_9STRA (Dynein light chain n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLM3_9STRA)

HSP 1 Score: 107 bits (267), Expect = 4.600e-28
Identity = 57/105 (54.29%), Postives = 71/105 (67.62%), Query Frame = 0
Query:    1 MADIDEQAAAEGQETFTERKIDVLVAEIPENLQQKATKRVCMAMDKYCIEKDIATDIKKHFDEECEGSWHCVTGRSFGCSVTHETKHLFFFKCDQMFVLLFCSPE 105
            MAD D  AA   +ET  +        +IPE + +KA  +   AMD++ IEKDIAT IK  FD++  G+WHCV GRSFGCSVTHETK+L FF+ DQ +VLLFCS E
Sbjct:    1 MADGDPGAALVRKETIHQM-------DIPEEMCRKAIGKANEAMDQHTIEKDIATAIKTSFDKDYGGTWHCVAGRSFGCSVTHETKYLVFFQLDQTYVLLFCSDE 98          
BLAST of mRNA_H-paniculata_contig14444.2673.1 vs. uniprot
Match: A0A7S2UW34_9STRA (Dynein light chain n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UW34_9STRA)

HSP 1 Score: 105 bits (261), Expect = 3.070e-27
Identity = 49/91 (53.85%), Postives = 69/91 (75.82%), Query Frame = 0
Query:   19 RKIDVLVAEIPE----NLQQKATKRVCMAMDKYCIEKDIATDIKKHFDEECEGSWHCVTGRSFGCSVTHETKHLFFFKCDQMFVLLFCSPE 105
            RK+ +L AE PE    +LQ+ A ++V  ++ K+ I KD+AT++K+HFDE+  G+WHCV GR+FGCSVT+ET++L FFK +Q FVLLF S E
Sbjct:   15 RKVVILRAEFPEVKGEDLQEDAIRKVDESLTKHTISKDVATEVKRHFDEKYGGTWHCVVGRNFGCSVTNETRYLLFFKIEQTFVLLFKSQE 105          
BLAST of mRNA_H-paniculata_contig14444.2673.1 vs. uniprot
Match: A0A835YLR1_9STRA (Dynein light chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLR1_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 5.130e-25
Identity = 42/66 (63.64%), Postives = 54/66 (81.82%), Query Frame = 0
Query:   27 EIPENLQQKATKRVCMAMDKYCIEKDIATDIKKHFDEECEGSWHCVTGRSFGCSVTHETKHLFFFK 92
            +IPE LQ+KA +RV   + +  + KDIA+D+KKHFD+EC G+WHCV GRSFGCSVTHETK+L FF+
Sbjct:   10 DIPEALQKKAIERVVEVLQRVAVAKDIASDMKKHFDQECGGTWHCVVGRSFGCSVTHETKYLLFFR 75          
BLAST of mRNA_H-paniculata_contig14444.2673.1 vs. uniprot
Match: A0A7S2CC43_9STRA (Dynein light chain n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CC43_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.380e-23
Identity = 45/103 (43.69%), Postives = 69/103 (66.99%), Query Frame = 0
Query:    1 MADIDEQAAAEGQETFTERKIDVLVAEIPENLQQKATKRVCMAMDKYCIEKDIATDIKKHFDEECEGSWHCVTGRSFGCSVTHETKHLFFFKCDQMFVLLFCS 103
            MAD D      G++  + RK+ +     P N+ + A +++  A+DK+ IEKD+AT +K  FD++  G+WHC+ G+SFGCS+THETK+L + + D +F LLFCS
Sbjct:    1 MAD-DSDEEEVGKKKVSTRKVHLHQVLAPNNMCELAVEKLDEAIDKHTIEKDMATAVKTTFDKDYGGTWHCIVGKSFGCSITHETKYLMYIQVDHLFCLLFCS 102          
BLAST of mRNA_H-paniculata_contig14444.2673.1 vs. uniprot
Match: A0A7S1U8R4_9STRA (Dynein light chain n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8R4_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.610e-23
Identity = 44/79 (55.70%), Postives = 59/79 (74.68%), Query Frame = 0
Query:   18 ERKIDVLVAEIPENLQQKATKRVCMAMDKYCIEKDIATDIKKHFDEECEGSWHCVTGRSFGCSVTHETKHLFFFKCDQM 96
            ER + VL AE+PE+L+ KA +    A+D + +EKD+A  +KK FDE   G+WHCV GR+FGCS+THETK+L FFK DQ+
Sbjct:   10 ERVLRVLKAEMPEDLKTKAAEVGNQALDAHEVEKDVAQFVKKAFDEASPGTWHCVVGRNFGCSITHETKYLIFFKLDQV 88          
BLAST of mRNA_H-paniculata_contig14444.2673.1 vs. uniprot
Match: A0A7M3RBX8_SPIER (Dynein light chain n=2 Tax=Diphyllobothriidae TaxID=28843 RepID=A0A7M3RBX8_SPIER)

HSP 1 Score: 87.0 bits (214), Expect = 2.710e-20
Identity = 42/88 (47.73%), Postives = 58/88 (65.91%), Query Frame = 0
Query:   16 FTERKIDVLVAEIPENLQQKATKRVCMAMDKYCIEKDIATDIKKHFDEECEGSWHCVTGRSFGCSVTHETKHLFFFKCDQMFVLLFCS 103
             ++RK  V  A++ E +QQ A      A++KY IEKDIA+ IKK FD++   +WHC+ GR+FG  VTHETKH  +F   Q+ +LLF S
Sbjct:    1 MSDRKAVVKNADMTEEMQQDAVDLASAALEKYNIEKDIASYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKS 88          
BLAST of mRNA_H-paniculata_contig14444.2673.1 vs. uniprot
Match: A0A8C4N859_EPTBU (Dynein light chain n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4N859_EPTBU)

HSP 1 Score: 86.7 bits (213), Expect = 3.840e-20
Identity = 41/88 (46.59%), Postives = 60/88 (68.18%), Query Frame = 0
Query:   16 FTERKIDVLVAEIPENLQQKATKRVCMAMDKYCIEKDIATDIKKHFDEECEGSWHCVTGRSFGCSVTHETKHLFFFKCDQMFVLLFCS 103
             TE+K  +  A++P+++Q+ A      A+DK+ IEKDIA+ IKK FD++   +WHCV GR+FG  VTHE+KH  +F   Q+ +LLF S
Sbjct:    1 MTEQKPVIKNADMPDDMQEDAVSFAKQALDKFNIEKDIASFIKKEFDKKYNPTWHCVVGRNFGSYVTHESKHFIYFYLGQVAILLFKS 88          
BLAST of mRNA_H-paniculata_contig14444.2673.1 vs. uniprot
Match: A0A183T9E8_SCHSO (Dynein light chain n=2 Tax=Schistocephalus solidus TaxID=70667 RepID=A0A183T9E8_SCHSO)

HSP 1 Score: 87.8 bits (216), Expect = 4.420e-20
Identity = 43/89 (48.31%), Postives = 58/89 (65.17%), Query Frame = 0
Query:   15 TFTERKIDVLVAEIPENLQQKATKRVCMAMDKYCIEKDIATDIKKHFDEECEGSWHCVTGRSFGCSVTHETKHLFFFKCDQMFVLLFCS 103
            T  +RK  V  A++ E +QQ A      A++KY IEKDIA+ IKK FD++   +WHC+ GR+FG  VTHETKH  +F   Q+ +LLF S
Sbjct:   44 TMGDRKAVVKNADMTEEMQQDAVDLASTALEKYNIEKDIASYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKS 132          
BLAST of mRNA_H-paniculata_contig14444.2673.1 vs. uniprot
Match: A0A0P1B084_PLAHL (Dynein light chain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B084_PLAHL)

HSP 1 Score: 86.7 bits (213), Expect = 7.180e-20
Identity = 39/88 (44.32%), Postives = 59/88 (67.05%), Query Frame = 0
Query:   20 KIDVLVAEIPENLQQKATKRVCMAMDKY--CIEKDIATDIKKHFDEECEGSWHCVTGRSFGCSVTHETKHLFFFKCDQMFVLLFCSPE 105
            KI +L  EI   ++ +A   +   + K    IEKDIATD+KKHFD++   +WHC+ G+ FGCS+ ++T++L FF+ DQ +VL+F S E
Sbjct:   25 KISILRLEIDTAMKDEAVTHLIQILQKTPDAIEKDIATDMKKHFDQKYGQTWHCIVGKGFGCSIAYDTQYLLFFRADQHYVLIFKSTE 112          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14444.2673.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ38_ECTSI7.770e-6286.67Dynein light chain n=2 Tax=Ectocarpus TaxID=2879 R... [more]
A0A7S2RLM3_9STRA4.600e-2854.29Dynein light chain n=1 Tax=Rhizochromulina marina ... [more]
A0A7S2UW34_9STRA3.070e-2753.85Dynein light chain n=1 Tax=Fibrocapsa japonica Tax... [more]
A0A835YLR1_9STRA5.130e-2563.64Dynein light chain n=1 Tax=Tribonema minus TaxID=3... [more]
A0A7S2CC43_9STRA1.380e-2343.69Dynein light chain n=1 Tax=Dictyocha speculum TaxI... [more]
A0A7S1U8R4_9STRA1.610e-2355.70Dynein light chain n=1 Tax=Phaeomonas parva TaxID=... [more]
A0A7M3RBX8_SPIER2.710e-2047.73Dynein light chain n=2 Tax=Diphyllobothriidae TaxI... [more]
A0A8C4N859_EPTBU3.840e-2046.59Dynein light chain n=1 Tax=Eptatretus burgeri TaxI... [more]
A0A183T9E8_SCHSO4.420e-2048.31Dynein light chain n=2 Tax=Schistocephalus solidus... [more]
A0A0P1B084_PLAHL7.180e-2044.32Dynein light chain n=1 Tax=Plasmopara halstedii Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001372Dynein light chain, type 1/2SMARTSM01375Dynein_light_2coord: 16..103
e-value: 1.7E-30
score: 117.3
IPR001372Dynein light chain, type 1/2PFAMPF01221Dynein_lightcoord: 20..101
e-value: 3.5E-26
score: 91.3
IPR001372Dynein light chain, type 1/2PANTHERPTHR11886DYNEIN LIGHT CHAINcoord: 14..102
IPR037177Dynein light chain superfamilyGENE3D3.30.740.10coord: 16..103
e-value: 1.8E-27
score: 97.2
IPR037177Dynein light chain superfamilySUPERFAMILY54648DLCcoord: 14..103
NoneNo IPR availablePANTHERPTHR11886:SF35DYNEIN LIGHT CHAIN 2, CYTOPLASMICcoord: 14..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14444contigH-paniculata_contig14444:3955..5527 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14444.2673.1mRNA_H-paniculata_contig14444.2673.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14444 3955..5527 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14444.2673.1 ID=prot_H-paniculata_contig14444.2673.1|Name=mRNA_H-paniculata_contig14444.2673.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=106bp
MADIDEQAAAEGQETFTERKIDVLVAEIPENLQQKATKRVCMAMDKYCIE
KDIATDIKKHFDEECEGSWHCVTGRSFGCSVTHETKHLFFFKCDQMFVLL
FCSPE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001372Dynein_light_chain_typ-1/2
IPR037177DLC_sf