prot_H-paniculata_contig14438.2666.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14438.2666.1
Unique Nameprot_H-paniculata_contig14438.2666.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length82
Homology
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BLAST of mRNA_H-paniculata_contig14438.2666.1 vs. uniprot
Match: D7FP83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP83_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 1.510e-18
Identity = 43/53 (81.13%), Postives = 48/53 (90.57%), Query Frame = 0 
Query:   29 DAAGDNTFFESVKTSLPGLDMFDPSVFDIRMVLAVLVAVALVAYAVFRLFVRK 81
            D AG+ TFFESVKTSLPGLDMFDPSVFDIRMV+ VL  V+L+AYA+FRLFVRK
Sbjct:   14 DTAGEGTFFESVKTSLPGLDMFDPSVFDIRMVMGVLACVSLLAYAIFRLFVRK 66
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BLAST of mRNA_H-paniculata_contig14438.2666.1 vs. uniprot
Match: A0A835Z738_9STRA (Pre protein translocase subunit Sec66-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z738_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 8.840e-7
Identity = 26/45 (57.78%), Postives = 34/45 (75.56%), Query Frame = 0 
Query:   37 FESVKTSLPGLDMFDPSVFDIRMVLAVLVAVALVAYAVFRLFVRK 81
            FE +KTSLP LD+FDPSVFD+RMVL  L    L++Y  +RL++ K
Sbjct:   31 FEDIKTSLPRLDIFDPSVFDMRMVLGALTLFGLLSYFAYRLYMNK 75
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14438.2666.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FP83_ECTSI1.510e-1881.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z738_9STRA8.840e-757.78Pre protein translocase subunit Sec66-domain-conta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..56
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..79
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 80..81
NoneNo IPR availableTMHMMTMhelixcoord: 57..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14438contigH-paniculata_contig14438:3748..5212 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14438.2666.1mRNA_H-paniculata_contig14438.2666.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14438 984..5351 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14438.2666.1 ID=prot_H-paniculata_contig14438.2666.1|Name=mRNA_H-paniculata_contig14438.2666.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=82bp
MEGEADNMAGKTFTPGMDGGAAFGGAPGDAAGDNTFFESVKTSLPGLDMF
DPSVFDIRMVLAVLVAVALVAYAVFRLFVRK*
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