mRNA_H-paniculata_contig14436.2665.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig14436.2665.1
Unique NamemRNA_H-paniculata_contig14436.2665.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig14436.2665.1 vs. uniprot
Match: A0A6H5JNE7_9PHAE (Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNE7_9PHAE)

HSP 1 Score: 216 bits (549), Expect = 1.360e-65
Identity = 100/128 (78.12%), Postives = 114/128 (89.06%), Query Frame = 1
Query:    1 VECFEDNPGILMYGMMCVVYTTGLWLLLASWLELPVSTTHSTVGGIVGMAMAYRGADCVLWHEDTDTFPFLKGISAIVASWALSPVFSGCFSVVLFLFVRTFVLRSRDAYKRSFWVFPLLVMATVAVN 384
            +ECFEDNPGILMYG MCVVYTTG+WLLLAS+ ELPVSTTHSTVGGIVGMAM YRGADCV+W+E+ D FP+LKG+SAIVASWALSP+FS   +V LFLF+RTFVLRS DA+KR+  VFP LV AT+AVN
Sbjct:   89 IECFEDNPGILMYGNMCVVYTTGIWLLLASFFELPVSTTHSTVGGIVGMAMTYRGADCVVWYEEADLFPYLKGVSAIVASWALSPLFSAVIAVALFLFMRTFVLRSPDAHKRAINVFPFLVTATIAVN 216          
BLAST of mRNA_H-paniculata_contig14436.2665.1 vs. uniprot
Match: A0A6H5JNL8_9PHAE (Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNL8_9PHAE)

HSP 1 Score: 212 bits (539), Expect = 1.070e-64
Identity = 97/130 (74.62%), Postives = 112/130 (86.15%), Query Frame = 1
Query:    1 VECFEDNPGILMYGMMCVVYTTGLWLLLASWLELPVSTTHSTVGGIVGMAMAYRGADCVLWHEDTDTFPFLKGISAIVASWALSPVFSGCFSVVLFLFVRTFVLRSRDAYKRSFWVFPLLVMATVAVNGE 390
            +ECF DNPGILMYG MCVVYTTG+WLLLAS+ ELPVSTTHST+GGIVGMAM YRGADCV+W+E+ D FP+LKGISAIVASW LSPV S   +V LFLF+RTFVLRS D+++R+  VFP LV AT+AVNG 
Sbjct:    5 IECFTDNPGILMYGNMCVVYTTGIWLLLASYFELPVSTTHSTIGGIVGMAMTYRGADCVVWYEEADLFPYLKGISAIVASWVLSPVLSAVIAVALFLFMRTFVLRSPDSHQRAIVVFPFLVTATIAVNGN 134          
BLAST of mRNA_H-paniculata_contig14436.2665.1 vs. uniprot
Match: D8LJQ4_ECTSI (High affinity phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ4_ECTSI)

HSP 1 Score: 197 bits (501), Expect = 1.320e-62
Identity = 84/130 (64.62%), Postives = 110/130 (84.62%), Query Frame = 1
Query:    1 VECFEDNPGILMYGMMCVVYTTGLWLLLASWLELPVSTTHSTVGGIVGMAMAYRGADCVLWHEDTDTFPFLKGISAIVASWALSPVFSGCFSVVLFLFVRTFVLRSRDAYKRSFWVFPLLVMATVAVNGE 390
            VECF DNPG+LMYGMMCVVYTTG+WLLLAS+L LPVSTTH+T+G ++GM + Y GA CV+W +++D+FP++KG++AI  SW LSP+FSG  S+++FL VR FVLRS +A+ RSFWVFP+LVM  + V+GE
Sbjct:   29 VECFLDNPGVLMYGMMCVVYTTGMWLLLASYLALPVSTTHATIGAMIGMTVVYGGAGCVVWFQESDSFPYVKGVAAIAVSWVLSPIFSGIVSLLVFLTVRAFVLRSPNAFGRSFWVFPILVMVAITVDGE 158          
BLAST of mRNA_H-paniculata_contig14436.2665.1 vs. uniprot
Match: D7G0K9_ECTSI (Phosphate transporter n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0K9_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 1.020e-61
Identity = 96/127 (75.59%), Postives = 108/127 (85.04%), Query Frame = 1
Query:    4 ECFEDNPGILMYGMMCVVYTTGLWLLLASWLELPVSTTHSTVGGIVGMAMAYRGADCVLWHEDTDTFPFLKGISAIVASWALSPVFSGCFSVVLFLFVRTFVLRSRDAYKRSFWVFPLLVMATVAVN 384
            ECFEDNPGILMYG MCVVYTTG WLLLAS+ ELPVSTTHST+GGIVGMA+ YRG DCV+W+E  D FP+LKGISAIVASW LSPV S   +V LFLF+RTFVLRS D++KR+  VFP LV AT+AVN
Sbjct:   91 ECFEDNPGILMYGNMCVVYTTGFWLLLASFFELPVSTTHSTIGGIVGMAITYRGPDCVVWYEKADLFPYLKGISAIVASWVLSPVLSAVIAVALFLFMRTFVLRSPDSHKRAIVVFPFLVTATIAVN 217          
BLAST of mRNA_H-paniculata_contig14436.2665.1 vs. uniprot
Match: D8LJQ6_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ6_ECTSI)

HSP 1 Score: 204 bits (519), Expect = 1.770e-61
Identity = 90/128 (70.31%), Postives = 112/128 (87.50%), Query Frame = 1
Query:    1 VECFEDNPGILMYGMMCVVYTTGLWLLLASWLELPVSTTHSTVGGIVGMAMAYRGADCVLWHEDTDTFPFLKGISAIVASWALSPVFSGCFSVVLFLFVRTFVLRSRDAYKRSFWVFPLLVMATVAVN 384
            VECF DNPGILMYGMMCVVYTTG+WLLLAS+LELPVSTTHST+G I+GMA+AY G+ CV+W++++D FP+ KG++AI  SW LSP+FSG  S+++FL VR FVLRS +A+ RSFWVFP+LVM T+AVN
Sbjct:   50 VECFLDNPGILMYGMMCVVYTTGMWLLLASYLELPVSTTHSTIGAIIGMAVAYAGSGCVVWYQESDIFPYFKGVAAIAVSWVLSPIFSGVASLLVFLTVRAFVLRSPNAFGRSFWVFPVLVMVTIAVN 177          
BLAST of mRNA_H-paniculata_contig14436.2665.1 vs. uniprot
Match: D7FWT9_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWT9_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 1.960e-56
Identity = 88/128 (68.75%), Postives = 106/128 (82.81%), Query Frame = 1
Query:    1 VECFEDNPGILMYGMMCVVYTTGLWLLLASWLELPVSTTHSTVGGIVGMAMAYRGADCVLWHEDTDTFPFLKGISAIVASWALSPVFSGCFSVVLFLFVRTFVLRSRDAYKRSFWVFPLLVMATVAVN 384
            V CF DNPGILMYG MCVVYT+G WLLLAS+ ELPVSTTH+TVGGIVGMAM YRGADCV+W+E+ + FP+LKG+SAIVASWALSPV S   +V L+ F+RTFVLR+  + K++  +FP LV  T+AVN
Sbjct:   97 VGCFVDNPGILMYGNMCVVYTSGFWLLLASFFELPVSTTHATVGGIVGMAMTYRGADCVVWYEEAEFFPYLKGVSAIVASWALSPVLSAVIAVALYFFMRTFVLRADQSQKKAINIFPCLVTVTIAVN 224          
BLAST of mRNA_H-paniculata_contig14436.2665.1 vs. uniprot
Match: D8LJP9_ECTSI (High affinity phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJP9_ECTSI)

HSP 1 Score: 178 bits (451), Expect = 2.580e-55
Identity = 79/130 (60.77%), Postives = 102/130 (78.46%), Query Frame = 1
Query:    1 VECFEDNPGILMYGMMCVVYTTGLWLLLASWLELPVSTTHSTVGGIVGMAMAYRGADCVLWHEDTDTFPFLKGISAIVASWALSPVFSGCFSVVLFLFVRTFVLRSRDAYKRSFWVFPLLVMATVAVNGE 390
            V CF DNPG+LMYGMMCV+YTT +WLLLAS+LELPVS T ST+  IVGM +AY G  CV+WH +++ FP  +G+ AI+  W LSP+ +G  S ++FL +RTFVLRS  A++RSFWVFP+LVM  VA++GE
Sbjct:    7 VSCFLDNPGVLMYGMMCVLYTTAMWLLLASYLELPVSATQSTISSIVGMTLAYGGRACVVWHRESEHFPGFQGVGAILLYWLLSPIVAGVASCLVFLALRTFVLRSPHAFRRSFWVFPVLVMIIVALDGE 136          
BLAST of mRNA_H-paniculata_contig14436.2665.1 vs. uniprot
Match: D7FZJ7_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZJ7_ECTSI)

HSP 1 Score: 188 bits (478), Expect = 4.730e-55
Identity = 86/128 (67.19%), Postives = 100/128 (78.12%), Query Frame = 1
Query:    1 VECFEDNPGILMYGMMCVVYTTGLWLLLASWLELPVSTTHSTVGGIVGMAMAYRGADCVLWHEDTDTFPFLKGISAIVASWALSPVFSGCFSVVLFLFVRTFVLRSRDAYKRSFWVFPLLVMATVAVN 384
            +ECF DNPGILMYG MCVVYT G+WLLLAS+ ELPVSTTHST+GGIVGM M YRGADCV+W+E+ D FP++KG+ AIV SWAL PV SG  + +LF  VR  VLRS  A  RS  VFPLLV  T+A+ 
Sbjct:   90 IECFTDNPGILMYGNMCVVYTNGIWLLLASFFELPVSTTHSTIGGIVGMTMTYRGADCVVWYEEADHFPYIKGVFAIVVSWALFPVLSGVVATLLFFVVRALVLRSEHALNRSMIVFPLLVTVTIAIE 217          
BLAST of mRNA_H-paniculata_contig14436.2665.1 vs. uniprot
Match: A0A6S9IV20_HETAK (Phosphate transporter n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9IV20_HETAK)

HSP 1 Score: 176 bits (445), Expect = 3.460e-50
Identity = 74/127 (58.27%), Postives = 103/127 (81.10%), Query Frame = 1
Query:    1 VECFEDNPGILMYGMMCVVYTTGLWLLLASWLELPVSTTHSTVGGIVGMAMAYRGADCVLWHEDTDTFPFLKGISAIVASWALSPVFSGCFSVVLFLFVRTFVLRSRDAYKRSFWVFPLLVMATVAV 381
            ++CF D+  +LMYGM CV++ TGLWLLLA++L++PVSTTHS VGGI+GM +A +G  CV+WH DTDTFP++KG+SAIV SW LSP+FSG  +  LFLF RTF+LRS ++Y R+ + +PLL+ +T+ +
Sbjct:   88 IDCFMDDGPVLMYGMCCVIFCTGLWLLLATFLKMPVSTTHSVVGGIIGMTIAAKGGSCVVWHADTDTFPYVKGVSAIVVSWFLSPIFSGVGAAALFLFCRTFILRSENSYNRAIYFYPLLLGSTITL 214          
BLAST of mRNA_H-paniculata_contig14436.2665.1 vs. uniprot
Match: A0A6V1T0D7_HETAK (Phosphate transporter n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T0D7_HETAK)

HSP 1 Score: 174 bits (441), Expect = 1.460e-49
Identity = 72/127 (56.69%), Postives = 103/127 (81.10%), Query Frame = 1
Query:    1 VECFEDNPGILMYGMMCVVYTTGLWLLLASWLELPVSTTHSTVGGIVGMAMAYRGADCVLWHEDTDTFPFLKGISAIVASWALSPVFSGCFSVVLFLFVRTFVLRSRDAYKRSFWVFPLLVMATVAV 381
            ++CF D+  +LMYGMMCV++ TGLWLL+A++ ++PVSTTHS VGGI+GM +A +G  CV+WH+DTD FPF+KG+SAIV SW LSP+FSG  + +L+LFVRTF+LRS ++Y R+F  +P L+ + + +
Sbjct:   88 IDCFIDDGPVLMYGMMCVIFCTGLWLLIATFFQMPVSTTHSVVGGIIGMTIAAKGGSCVVWHKDTDQFPFVKGVSAIVVSWILSPLFSGVGAAILYLFVRTFILRSENSYTRAFIFYPFLLASAITL 214          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14436.2665.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNE7_9PHAE1.360e-6578.13Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP ... [more]
A0A6H5JNL8_9PHAE1.070e-6474.62Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP ... [more]
D8LJQ4_ECTSI1.320e-6264.62High affinity phosphate transporter n=1 Tax=Ectoca... [more]
D7G0K9_ECTSI1.020e-6175.59Phosphate transporter n=2 Tax=Ectocarpus siliculos... [more]
D8LJQ6_ECTSI1.770e-6170.31Phosphate transporter n=1 Tax=Ectocarpus siliculos... [more]
D7FWT9_ECTSI1.960e-5668.75Phosphate transporter n=1 Tax=Ectocarpus siliculos... [more]
D8LJP9_ECTSI2.580e-5560.77High affinity phosphate transporter n=1 Tax=Ectoca... [more]
D7FZJ7_ECTSI4.730e-5567.19Phosphate transporter n=1 Tax=Ectocarpus siliculos... [more]
A0A6S9IV20_HETAK3.460e-5058.27Phosphate transporter n=3 Tax=Heterosigma akashiwo... [more]
A0A6V1T0D7_HETAK1.460e-4956.69Phosphate transporter n=2 Tax=Heterosigma akashiwo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14436contigH-paniculata_contig14436:4324..4716 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score208.0
Seed ortholog evalue2.7e-51
Seed eggNOG ortholog2880.D7G0K8
Preferred namePHO89
KEGG koko:K01280,ko:K03306,ko:K14640
KEGG TC2.A.20,2.A.20.2
Hectar predicted targeting categorysignal anchor
GOsGO:0003674,GO:0005215,GO:0005315,GO:0005436,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0006817,GO:0006820,GO:0008150,GO:0008324,GO:0012505,GO:0015075,GO:0015077,GO:0015081,GO:0015291,GO:0015293,GO:0015294,GO:0015318,GO:0015319,GO:0015370,GO:0015672,GO:0015698,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0035435,GO:0035725,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098655,GO:0098656,GO:0098660,GO:0098661,GO:0098662
EggNOG free text desc.inorganic phosphate transmembrane transporter activity
EggNOG OGsCOG0306@1,KOG2493@2759
EC3.4.14.10
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko02000,ko03110
Exons1
Model size393
Cds size393
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929148.5074053-CDS-H-paniculata_contig14436:4323..47161622929148.5074053-CDS-H-paniculata_contig14436:4323..4716Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14436 4324..4716 +
1691480750.100372-CDS-H-paniculata_contig14436:4323..47161691480750.100372-CDS-H-paniculata_contig14436:4323..4716Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14436 4324..4716 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14436.2665.1prot_H-paniculata_contig14436.2665.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig14436 4324..4716 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig14436.2665.1

>prot_H-paniculata_contig14436.2665.1 ID=prot_H-paniculata_contig14436.2665.1|Name=mRNA_H-paniculata_contig14436.2665.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=131bp
VECFEDNPGILMYGMMCVVYTTGLWLLLASWLELPVSTTHSTVGGIVGMA
MAYRGADCVLWHEDTDTFPFLKGISAIVASWALSPVFSGCFSVVLFLFVR
TFVLRSRDAYKRSFWVFPLLVMATVAVNGE*
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mRNA from alignment at H-paniculata_contig14436:4324..4716+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig14436.2665.1 ID=mRNA_H-paniculata_contig14436.2665.1|Name=mRNA_H-paniculata_contig14436.2665.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=393bp|location=Sequence derived from alignment at H-paniculata_contig14436:4324..4716+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGGAATGCTTTGAGGACAACCCTGGTATCCTCATGTACGGCATGATGTG CGTGGTGTACACCACCGGCCTCTGGCTGCTCCTCGCCTCGTGGCTCGAGC TCCCCGTTTCCACCACCCACTCCACCGTCGGCGGCATCGTCGGCATGGCC ATGGCCTACCGTGGCGCCGACTGCGTGCTCTGGCACGAGGACACTGACAC CTTCCCTTTCCTGAAGGGTATCTCTGCCATCGTGGCGTCGTGGGCGCTGT CTCCCGTCTTCTCCGGGTGCTTCTCCGTGGTGCTTTTCCTGTTTGTGCGC ACCTTCGTGCTGAGGTCTAGGGACGCATACAAGAGGTCGTTCTGGGTGTT CCCTCTGCTGGTGATGGCCACTGTCGCCGTGAACGGTGAGTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig14436:4324..4716+

>mRNA_H-paniculata_contig14436.2665.1 ID=mRNA_H-paniculata_contig14436.2665.1|Name=mRNA_H-paniculata_contig14436.2665.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=786bp|location=Sequence derived from alignment at H-paniculata_contig14436:4324..4716+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGGAATGCTTTGAGGACAACCCTGGTATCCTCATGTACGGCATGATGTG
CGTGGTGTACACCACCGGCCTCTGGCTGCTCCTCGCCTCGTGGCTCGAGC
TCCCCGTTTCCACCACCCACTCCACCGTCGGCGGCATCGTCGGCATGGCC
ATGGCCTACCGTGGCGCCGACTGCGTGCTCTGGCACGAGGACACTGACAC
CTTCCCTTTCCTGAAGGGTATCTCTGCCATCGTGGCGTCGTGGGCGCTGT
CTCCCGTCTTCTCCGGGTGCTTCTCCGTGGTGCTTTTCCTGTTTGTGCGC
ACCTTCGTGCTGAGGTCTAGGGACGCATACAAGAGGTCGTTCTGGGTGTT
CCCTCTGCTGGTGATGGCCACTGTCGCCGTGAACGGTGAGTGAGTGGAAT
GCTTTGAGGACAACCCTGGTATCCTCATGTACGGCATGATGTGCGTGGTG
TACACCACCGGCCTCTGGCTGCTCCTCGCCTCGTGGCTCGAGCTCCCCGT
TTCCACCACCCACTCCACCGTCGGCGGCATCGTCGGCATGGCCATGGCCT
ACCGTGGCGCCGACTGCGTGCTCTGGCACGAGGACACTGACACCTTCCCT
TTCCTGAAGGGTATCTCTGCCATCGTGGCGTCGTGGGCGCTGTCTCCCGT
CTTCTCCGGGTGCTTCTCCGTGGTGCTTTTCCTGTTTGTGCGCACCTTCG
TGCTGAGGTCTAGGGACGCATACAAGAGGTCGTTCTGGGTGTTCCCTCTG
CTGGTGATGGCCACTGTCGCCGTGAACGGTGAGTGA
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