mRNA_H-paniculata_contig14430.2661.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig14430.2661.1
Unique NamemRNA_H-paniculata_contig14430.2661.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig14430.2661.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 275 bits (703), Expect = 5.780e-80
Identity = 153/354 (43.22%), Postives = 209/354 (59.04%), Query Frame = 1
Query:    1 LESAIEEARTEGLPPNGVTELRKIVMNSHFHAFRRALSGDPPADVEPLRMHVPADARAARARPRPMSRDKAEWLDKHFTKLAQAGMVFANLQARFSSVAMAVPKKD----TYRMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQAQEIFTMVTAKGVYTPTRVPQGVLNATSYFQGTMGDVLAGLLGKICEVWVDDIGIWAGTWQELMRRLRVVLERLQVRG------------------------ATVSHDPERVQGLASMRRPNTAGELMQFLQASNWMRTSVPELAVVVEPLREMLETFL-NNTRRTRRAADKIVITRGDWTEERAAAWE 975
            L+ A++ A   GL P G+  LR++V +  F+ FRR + GDPPA+V P+ + +   A+  +AR R  + DK +WL      L   G+V+ NLQA ++S  M  PK+     TYR V D+RAVN  I  S  PMP+LE   + ++ A+ + +LD+LQGYW MPL P+AQEIFTM+   G+Y+P RVPQGVLNATSY+QGTM  +L  L    C VWVDDI  W  T ++L+  L ++L R +  G                          + HD +R+ GLA++RRP TAGELMQFLQA NW+RTS+P ++ +V PLRE LE  +  N  RT+R A    I    WT     +WE
Sbjct:  602 LDRAVDSAADAGLSPWGLDRLRQVV-DRRFNVFRRGVRGDPPANVPPMTVKLKTGAKPVKARLRTYNPDKTKWLTTCLAALVALGLVYVNLQAIWASAIMLTPKRSGDKVTYRFVGDFRAVNRQIEKSPGPMPDLEADMQRLSRATCYGSLDMLQGYWGMPLAPEAQEIFTMIGPGGLYSPERVPQGVLNATSYYQGTMNSILHDLN---CIVWVDDIVYWGETEEDLLNTLDLILARFEHHGLFVAAHKCTFYTTSVKWCGKVYSKGVIEHDRDRLSGLANLRRPETAGELMQFLQAVNWLRTSLPRMSEIVAPLREFLELHMAGNPNRTKRVASNRAIAPDAWTPAMVESWE 951          
BLAST of mRNA_H-paniculata_contig14430.2661.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 260 bits (665), Expect = 7.250e-75
Identity = 159/350 (45.43%), Postives = 203/350 (58.00%), Query Frame = 1
Query:    1 LESAIEEARTEGLPPNGVTELRKIVMNSHFHAFRRALS-GDPPADVEPLRMHVPADARAARARPRPMSRDKAEWLDKHFTKLAQAGMVFANLQARFSSVAMAVPKKDTYRMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQAQEIFTMVTAKGVYTPTRVPQGVLNATSYFQGTMGDVLAGLLGKICEVWVDDIGIWAGTWQELMRRLRVVLERLQVRG------------------------ATVSHDPERVQGLASMRRPNTAGELMQFLQASNWMRTSVPELAVVVEPLREMLETFLNNTR-RTRRAADKIVITRGDWTEERAAAW 972
            L+SA+  A   GL    V  LR I+ +  ++AFRR L  GDPPA+VEPLR+ +   AR  +ARPR  +  K  WL       A  G+VF N+QA ++S AMA PKK  YR+V+D+RA N  +      MPN E     ++ A  + +LDLLQ YWQ PL P+AQEIFT+ T  G+YTP RVPQG+LNATSYFQ T+  +L GL    C VWVDD+  W     +L+  L ++L+RL+  G                          V HDPER+ GLA+MRRP TAGELMQFLQA NW+RTS+P +A VV PLR  LE  L   + RT+R A+   I     T     AW
Sbjct:  710 LDSAVSSAAAAGLEEPHVGRLRGII-SERWNAFRRGLRHGDPPANVEPLRVTLKPGARPVKARPRVYNPIKTAWL-------AGLGLVFLNMQAVWASAAMATPKKGGYRLVSDFRAANKQVEKVPGVMPNPEASIAQLSAAKFYGSLDLLQWYWQCPLAPEAQEIFTIATPGGLYTPKRVPQGILNATSYFQATLTRILDGLN---CFVWVDDVVYWGMDKDDLLDTLDLILDRLEGAGLYVAAHKCTFFETSITWCGKVYSEGQVEHDPERLSGLATMRRPETAGELMQFLQAVNWLRTSLPRMAEVVWPLRVFLEQHLVGAKSRTKRVAENRAIAADALTPALVEAW 1048          
BLAST of mRNA_H-paniculata_contig14430.2661.1 vs. uniprot
Match: A0A6A3GM82_9STRA (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GM82_9STRA)

HSP 1 Score: 201 bits (511), Expect = 1.400e-57
Identity = 124/324 (38.27%), Postives = 172/324 (53.09%), Query Frame = 1
Query:    1 LESAIEEARTEGLPPNGVTELRKIVMNSHFHAFRRALSGDPPADVEPLRMHVPADARAARARPRPMSRDKAEWLDKHFTKLAQAGMVFANLQARFSSVAMAVPKKDTY-------RMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQAQEIFTMVTAKGVYTPTRVPQGVLNATSYFQGTMGDVLAGLLGKICEVWVDDIGIWAGTWQELMRRLRVVLERLQVRG------------------------ATVSHDPERVQGLASMRRPNTAGELMQFLQASNWMRTSVPELAVVVEPLREMLE 879
            L+S +  AR +GL   GV  LR+I++     +FR     DPP  V PL++ V  +A+  +A+PR  S D   +LD+H  KL + G+VF N ++R++S    V KK+         RM  D R VN        PMP LE +   + GA V   LD  +GYWQ+PL   +QE+FT +T +G+YTPTRVP G  +A +Y QG + ++   LLG     W+DDI  +A +  EL++ L  VL R +V G                        A V H  +RVQGL  M+ P TAG+L QFL A NWMR S+PE   +   L  +LE
Sbjct:   37 LDSKLAAARAKGLSAKGVKRLREILLRRQ-DSFRLEFGCDPPVKVAPLQVRVTVNAQPTKAQPRRYSPDDRAFLDRHTAKLLEFGLVFLNHRSRWASAPRIVRKKEQDSDPTADPRMTIDTRGVNERTESMPWPMPVLEVVLGALEGAKVVFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDLLGNGILAWLDDILGYAESEDELLQLLDQVLARCEVYGLKLHAKKCEFFEIEVKWCGKTVSAAGVRHCSDRVQGLVEMQPPQTAGDLQQFLCAVNWMRQSIPEYNRLTAGLYAVLE 359          
BLAST of mRNA_H-paniculata_contig14430.2661.1 vs. uniprot
Match: A0A6A4AUS0_9STRA (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4AUS0_9STRA)

HSP 1 Score: 195 bits (495), Expect = 3.020e-56
Identity = 126/347 (36.31%), Postives = 179/347 (51.59%), Query Frame = 1
Query:   34 GLPPNGVTELRKIVMNSHFHAFRRALSGDPPADVEPLRMHVPADARAARARPRPMSRDKAEWLDKHFTKLAQAGMVFANLQARFSSVAMAVPKKDTY-------RMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQAQEIFTMVTAKGVYTPTRVPQGVLNATSYFQGTMGDVLAGLLGKICEVWVDDIGIWAGTWQELMRRLRVVLERLQVRG-----------AT-------------VSHDPERVQGLASMRRPNTAGELMQFLQASNWMRTSVPELAVVVEPLREMLETF--LNNTRRTRRAADKIVITRGDWTEERAAAWE 975
            GL  +G  +LR  VM      FR     DPP  V P+++ +  DAR  RA+PRP S +   +LD+H   L   G+V+ N ++R++S    V K++         RM  D R+VN    P + PMP L+ +   + GA VF  LD  +GYWQ+PL P +QE+++ VT +G+YTPTRVP G  +A +Y QG + ++   L+G     W+DDI  +A     L+  L  VL R +  G           AT             V H PERVQGL  M  P TAG+L QFL A NWMR S+PE   +   L + LE    ++ +R+    A KI +    W +   A++E
Sbjct:    2 GLSLDGRAKLR-AVMRVRVDNFRLEFGNDPPVRVTPMQVRLKDDARPVRAQPRPYSPNDRAFLDRHTAALLAHGLVYKNHRSRWASAPRIVRKREQDVDPTADPRMTIDTRSVNERTEPMSWPMPVLDVVLGELEGARVFFVLDWFRGYWQLPLHPDSQELYSFVTHRGIYTPTRVPMGATDAVAYCQGVVDEIFGDLIGDGILAWLDDILGYAENESALLELLDKVLSRCEAYGLKLHAKKCQFFATEVKWCGRVISADGVKHYPERVQGLVDMSPPRTAGDLQQFLCAVNWMRQSIPEYTRITANLYDALERAAKISGSRKKNMLA-KIRLDDVGWGDTEIASFE 346          
BLAST of mRNA_H-paniculata_contig14430.2661.1 vs. uniprot
Match: A0A0G4J790_PLABS (Reverse transcriptase domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J790_PLABS)

HSP 1 Score: 204 bits (519), Expect = 4.660e-56
Identity = 118/348 (33.91%), Postives = 185/348 (53.16%), Query Frame = 1
Query:   13 IEEARTEGLPPNGVTELRKIVMNSHFHAFRRALSGDPPADVEPLRMHVPADARAARARPRPMSRDKAEWLDKHFTKLAQAGMVFANLQARFSSVAMAVPKKDT--YRMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQAQEIFTMVTAKGVYTPTRVPQGVLNATSYFQGTMGDVLAGLLGKICEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGAT------------------------VSHDPERVQGLASMRRPNTAGELMQFLQASNWMRTSVPELAVVVEPLREMLETFLNNTRRTRRAADKIVITRG-DWTEERAAAWE 975
            I +AR  G+   GV  LR +++  H + FR  L  D P ++EP+   +  DA   R RPR  +  + E+LD+    L +  +++ N+ +R++S  + V K +   YR+  D R VN+   P+A PMPN+E   R +AG + F T+D  +G+W MP+  + QEIF+ +T  GVYTPTR  QG  N+   FQ  +G +   +   +  +W+DD+  +A T   L+ +L  VLER + R                           + HDPER++ L SM RPNT  EL QF+ A+NWMRTSVP  A ++ PL+E+ +      +R + ++   +      WT+  + A+E
Sbjct:  256 IHQARLNGMSRQGVARLR-LILRRHVNEFRTQLGQDGPVNIEPMITKLQPDATPYRCRPRSYNPKQKEFLDEMIKMLLENNLIYLNMNSRWASPVLVVKKPNGKGYRLCVDLRQVNSRTVPTAWPMPNIEAASRKLAGMTCFFTIDAHKGFWLMPIAKECQEIFSFMTDDGVYTPTRSIQGATNSALQFQARIGKIFDDMKDHLL-IWIDDLLGFAKTEDILLHQLARVLERARERNLKFNPDKCVLFARELKWCGRIYSRDGIRHDPERIEALTSMPRPNTFKELQQFIWAANWMRTSVPGYAYIIAPLQELTDKANEEMKRIQSSSPSSIRLHDLGWTDRHSKAFE 601          
BLAST of mRNA_H-paniculata_contig14430.2661.1 vs. uniprot
Match: A0A2P4WWJ1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WWJ1_9STRA)

HSP 1 Score: 202 bits (514), Expect = 6.460e-55
Identity = 123/324 (37.96%), Postives = 173/324 (53.40%), Query Frame = 1
Query:    1 LESAIEEARTEGLPPNGVTELRKIVMNSHFHAFRRALSGDPPADVEPLRMHVPADARAARARPRPMSRDKAEWLDKHFTKLAQAGMVFANLQARFSSVAMAVPKKDTY-------RMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQAQEIFTMVTAKGVYTPTRVPQGVLNATSYFQGTMGDVLAGLLGKICEVWVDDIGIWAGTWQELMRRLRVVLERLQVRG------------------------ATVSHDPERVQGLASMRRPNTAGELMQFLQASNWMRTSVPELAVVVEPLREMLE 879
            L+S +  AR +GL   GV  LR+I++     +FR     DPP  V PL++ V  +A+  +A+PR  S +   +LD+H  KL + G+V  N ++R++S    V KK+         RM  D R VN        PMP LE +   + GA VF  LD  +GYWQ+PL   +QE+FT +T +G+YTPTRVP G  +A +Y QG + ++   LLG    VW+DDI  +A + +EL++ L  VL R +  G                        A V H P+RVQGL  M+   TAG+L QFL A NWMR S+PE   +   L  +LE
Sbjct:  396 LDSKLAAARAKGLSAKGVKRLREILLRRQ-DSFRLEFGSDPPVKVAPLQVRVKVNAQPTKAQPRRYSSNDKAFLDRHTAKLQEFGLVSLNHRSRWASAPRIVRKKEQGSDPTADPRMTIDTRGVNERTEAMPWPMPVLEVVLSALEGAQVFFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDLLGNGILVWLDDILGYAESEEELLQLLDQVLARCEAYGLKLHAKKCDFFEIEVKWCGKMVSAAGVRHYPDRVQGLVEMQPSQTAGDLQQFLCAVNWMRQSIPEYNRLTAGLHAVLE 718          
BLAST of mRNA_H-paniculata_contig14430.2661.1 vs. uniprot
Match: A0A6A3FJD6_9STRA (Reverse transcriptase domain-containing protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3FJD6_9STRA)

HSP 1 Score: 197 bits (502), Expect = 1.250e-54
Identity = 128/357 (35.85%), Postives = 182/357 (50.98%), Query Frame = 1
Query:    1 LESAIEEARTEGLPPNGVTELRKIVMNSHFHAFRRALSGDPPADVEPLRMHVPADARAARARPRPMSRDKAEWLDKHFTKLAQAGMVFANLQARFSSVAMAVPKKDTY-------RMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQAQEIFTMVTAKGVYTPTRVPQGVLNATSYFQGTMGDVLAGLLGKICEVWVDDIGIWAGTWQELMRRLRVVLERLQVRG-----------AT-------------VSHDPERVQGLASMRRPNTAGELMQFLQASNWMRTSVPELAVVVEPLREMLETFLN-NTRRTRRAADKIVITRGDWTEERAAAWE 975
            +E  IE A   GL  +G  +LR  VM    + FR     DPP  V P+++ +  DAR  RA+PR  S +   +LD+H   L   G+V+ N ++R++S    V K++         RM  D  +VN    P + PMP L+ +  G+ GA VF  LD L+GYWQ+PL P +QE+++ VT +G+YTPTRVP G  +A +Y  G + ++   L+G     W+DDI  +A     L+  L  VL R    G           AT             V H PERVQGL  M  P TAG+L QFL A NWMR S+PE   +   L + LE     ++ R +    KI +    W ++  A++E
Sbjct:  212 VERKIEIAEQMGLTLDGRAKLR-AVMRVRVNNFRLEFGNDPPVRVAPMQVRLKDDARPVRAQPRRYSPNDRAFLDRHTAALLAHGLVYKNHRSRWASAPRIVRKREQDVDPTADPRMTIDTWSVNERTEPMSWPMPVLDVVLGGLEGARVFFVLDWLRGYWQLPLHPDSQELYSFVTHRGIYTPTRVPMGATDAVAYCHGVVEEIFGDLVGDGILAWLDDILGYAENESALLELLDKVLSRCDAYGLKLHAKKCQFFATEVKWCGRVISADGVKHCPERVQGLVDMPPPRTAGDLQQFLCAVNWMRRSIPEYTRITANLYDALERAAKISSSRNKNVLAKIRLDDAGWGDKEIASFE 567          
BLAST of mRNA_H-paniculata_contig14430.2661.1 vs. uniprot
Match: A0A2P4YJ51_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YJ51_9STRA)

HSP 1 Score: 201 bits (510), Expect = 1.950e-54
Identity = 120/338 (35.50%), Postives = 180/338 (53.25%), Query Frame = 1
Query:    1 LESAIEEARTEGLPPNGVTELRKIVMNSHFHAFRRALSGDPPADVEPLRMHVPADARAARARPRPMSRDKAEWLDKHFTKLAQAGMVFANLQARFSSVAMAV--PKKDTYRMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQAQEIFTMVTAKGVYTPTRVPQGVLNATSYFQGTMGDVLAGLLGKICEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGAT------------------------VSHDPERVQGLASMRRPNTAGELMQFLQASNWMRTSVPELAVVVEPLREMLETFLNNTRRTRRAADKIVIT 936
            ++  + +A   G+  + +T     +++ HF  +R  L  DPPA V PL++ +   A   R + R  S +K+ +L+K   KL   G V+ N Q+R+   A+ V  P  D YR   DYR +N +  P A  MP++E       G   +   D L+G+WQ+P    ++E  + +T KGV+TPTRVPQG  +A  +FQ T+  VL  L+GK   VW+DD+ ++A T  EL+  +  VL++L   G                          + +DPER+Q L ++  P TA EL Q L ASNWMR+ + + A VV PL+E L+  L  T+RT+RAA  I IT
Sbjct:  137 VDDLVHDAINRGVVDDHITSRLYTILH-HFGGWRLELGNDPPARVPPLKIKLKPTASPYRCKMRQYSPEKSAFLEKFNRKLVDLGCVYENRQSRWRCPALPVKKPNTDDYRQTVDYRPINAITEPIAGVMPSIEVALEHCRGKKYYALFDFLKGFWQLPFHENSREYLSYMTNKGVFTPTRVPQGSTDADLHFQSTVQMVLRELVGKCVIVWIDDLLVFAETQSELLDAIDAVLQKLDEYGFILNPKKCSLFRTEIQWCGRIINKNGIGYDPERIQALRNIPPPMTAAELQQLLCASNWMRSGLVDYARVVRPLQERLDQALTGTKRTKRAAAGIQIT 473          
BLAST of mRNA_H-paniculata_contig14430.2661.1 vs. uniprot
Match: A0A6G0MLJ8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0MLJ8_9STRA)

HSP 1 Score: 200 bits (508), Expect = 4.970e-54
Identity = 123/324 (37.96%), Postives = 171/324 (52.78%), Query Frame = 1
Query:    1 LESAIEEARTEGLPPNGVTELRKIVMNSHFHAFRRALSGDPPADVEPLRMHVPADARAARARPRPMSRDKAEWLDKHFTKLAQAGMVFANLQARFSSVAMAVPKKDTY-------RMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQAQEIFTMVTAKGVYTPTRVPQGVLNATSYFQGTMGDVLAGLLGKICEVWVDDIGIWAGTWQELMRRLRVVLERLQVRG------------------------ATVSHDPERVQGLASMRRPNTAGELMQFLQASNWMRTSVPELAVVVEPLREMLE 879
            L+S +  AR +GL   GV  LR+I++     +FR     DPP  V PL++ V  +A+  +A+PR  S D   +LD+H  KL + G+VF N ++R++S    V KK+         RM  D R VN        PMP LE +   + GA VF  LD  +GYWQ+PL   +QE+FT +T +G+YTPTRVP G  +A +Y QG + ++    LG     W+DDI  +A +  EL++ L  VL R +  G                        A V H P+R QGL  M+ P TAG+L QFL A NWMR S+PE   +   L  +LE
Sbjct:  304 LDSKLAAARAKGLSAMGVKRLREILLRRQ-DSFRLEFGCDPPVKVAPLQVRVKVNAQPTKAQPRRYSPDDRAFLDRHTAKLLEFGLVFLNHRSRWASAPRIVRKKEQDSDPSADPRMTIDTRGVNERTEAMPWPMPVLEVVLGALEGAKVFFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDRLGNGILAWLDDILGYAESEDELLQLLDQVLARCEAYGLKLHAKKCEFFEIEVKWCGKMVSAAGVRHCPDRGQGLVEMQPPQTAGDLQQFLCAMNWMRQSIPEYNRLTAGLYAVLE 626          
BLAST of mRNA_H-paniculata_contig14430.2661.1 vs. uniprot
Match: A0A6A3Q7S3_9STRA (Uncharacterized protein n=6 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3Q7S3_9STRA)

HSP 1 Score: 200 bits (509), Expect = 4.980e-54
Identity = 123/324 (37.96%), Postives = 171/324 (52.78%), Query Frame = 1
Query:    1 LESAIEEARTEGLPPNGVTELRKIVMNSHFHAFRRALSGDPPADVEPLRMHVPADARAARARPRPMSRDKAEWLDKHFTKLAQAGMVFANLQARFSSVAMAVPKKDTY-------RMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCTLDLLQGYWQMPLDPQAQEIFTMVTAKGVYTPTRVPQGVLNATSYFQGTMGDVLAGLLGKICEVWVDDIGIWAGTWQELMRRLRVVLERLQVRG------------------------ATVSHDPERVQGLASMRRPNTAGELMQFLQASNWMRTSVPELAVVVEPLREMLE 879
            L+S +  AR +GL   GV  LR+I++     +FR     DPP  V PL++ V  +A+  +A+PR  S D   +LD+H  KL + G+VF N ++R++S    V KK+         RM  D R VN        PMP LE +   + GA VF  LD  +GYWQ+PL   +QE+FT +T +G+YTPTRVP G  +A +Y QG + ++    LG     W+DDI  +A +  EL++ L  VL R +  G                        A V H P+R QGL  M+ P TAG+L QFL A NWMR S+PE   +   L  +LE
Sbjct:  439 LDSKLAAARAKGLSAMGVKRLREILLRRQ-DSFRLEFGCDPPVKVAPLQVRVKVNAQPTKAQPRRYSPDDRAFLDRHTAKLLEFGLVFLNHRSRWASAPRIVRKKEQDSDPSADPRMTIDTRGVNERTEAMPWPMPVLEVVLGALEGAKVFFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDRLGNGILAWLDDILGYAESEDELLQLLDQVLARCEAYGLKLHAKKCEFFEIDVKWCGKMVSAAGVRHCPDRGQGLVEMQPPQTAGDLQQFLCAMNWMRQSIPEYNRLTSGLYAVLE 761          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14430.2661.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7F6_9PHAE5.780e-8043.22Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5A5_9PHAE7.250e-7545.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6A3GM82_9STRA1.400e-5738.27Reverse transcriptase domain-containing protein (F... [more]
A0A6A4AUS0_9STRA3.020e-5636.31Reverse transcriptase domain-containing protein (F... [more]
A0A0G4J790_PLABS4.660e-5633.91Reverse transcriptase domain-containing protein n=... [more]
A0A2P4WWJ1_9STRA6.460e-5537.96Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A6A3FJD6_9STRA1.250e-5435.85Reverse transcriptase domain-containing protein n=... [more]
A0A2P4YJ51_9STRA1.950e-5435.50Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A6G0MLJ8_9STRA4.970e-5437.96Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]
A0A6A3Q7S3_9STRA4.980e-5437.96Uncharacterized protein n=6 Tax=Phytophthora fraga... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14430contigH-paniculata_contig14430:5539..6585 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score204.9
Seed ortholog evalue5.7e-50
Seed eggNOG ortholog164328.Phyra85588
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QEWS@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons2
Model size975
Cds size975
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929148.2230732-CDS-H-paniculata_contig14430:5538..62531622929148.2230732-CDS-H-paniculata_contig14430:5538..6253Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14430 5539..6253 +
1691480749.9518478-CDS-H-paniculata_contig14430:5538..62531691480749.9518478-CDS-H-paniculata_contig14430:5538..6253Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14430 5539..6253 +
1622929148.2404668-CDS-H-paniculata_contig14430:6325..65851622929148.2404668-CDS-H-paniculata_contig14430:6325..6585Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14430 6326..6585 +
1691480749.9632664-CDS-H-paniculata_contig14430:6325..65851691480749.9632664-CDS-H-paniculata_contig14430:6325..6585Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14430 6326..6585 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14430.2661.1prot_H-paniculata_contig14430.2661.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig14430 5539..6585 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig14430.2661.1

>prot_H-paniculata_contig14430.2661.1 ID=prot_H-paniculata_contig14430.2661.1|Name=mRNA_H-paniculata_contig14430.2661.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=325bp
LESAIEEARTEGLPPNGVTELRKIVMNSHFHAFRRALSGDPPADVEPLRM
HVPADARAARARPRPMSRDKAEWLDKHFTKLAQAGMVFANLQARFSSVAM
AVPKKDTYRMVADYRAVNNLIAPSAMPMPNLEEIGRGMAGASVFCTLDLL
QGYWQMPLDPQAQEIFTMVTAKGVYTPTRVPQGVLNATSYFQGTMGDVLA
GLLGKICEVWVDDIGIWAGTWQELMRRLRVVLERLQVRGATVSHDPERVQ
GLASMRRPNTAGELMQFLQASNWMRTSVPELAVVVEPLREMLETFLNNTR
RTRRAADKIVITRGDWTEERAAAWE
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mRNA from alignment at H-paniculata_contig14430:5539..6585+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig14430.2661.1 ID=mRNA_H-paniculata_contig14430.2661.1|Name=mRNA_H-paniculata_contig14430.2661.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1047bp|location=Sequence derived from alignment at H-paniculata_contig14430:5539..6585+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTGGAGTCGGCGATAGAAGAAGCGAGGACTGAGGGTTTGCCGCCGAACGG AGTCACGGAGTTAAGAAAAATTGTGATGAACTCCCACTTCCATGCGTTTC GGCGGGCGCTGAGCGGGGATCCACCGGCGGACGTGGAACCGCTGCGGATG CATGTACCCGCGGACGCGCGAGCCGCCCGGGCGCGGCCGCGCCCGATGTC GCGCGACAAGGCAGAATGGCTGGATAAACATTTCACGAAGCTGGCACAGG CAGGTATGGTGTTCGCAAACCTCCAGGCAAGGTTCAGCAGCGTGGCGATG GCAGTGCCCAAGAAGGACACCTATCGAATGGTGGCCGACTACCGCGCAGT AAACAACCTGATCGCGCCGTCGGCGATGCCGATGCCAAACTTGGAGGAGA TCGGGCGAGGCATGGCGGGAGCCAGTGTGTTCTGCACACTGGATCTGCTG CAGGGCTACTGGCAGATGCCCCTCGATCCTCAAGCGCAAGAGATCTTCAC GATGGTCACGGCCAAGGGGGTATACACGCCTACCAGAGTTCCTCAGGGAG TGCTAAATGCGACTAGTTATTTCCAGGGGACGATGGGAGACGTACTGGCA GGCTTGCTCGGAAAAATATGTGAAGTATGGGTTGATGACATAGGAATATG GGCCGGTACGTGGCAGGAACTGATGCGGAGACTGCGGGTGGTGCTGGAGC GGCTACAGGTACGCGGTATTTATGCCGCGGCTCACAAGGCGAAGCTGTTT CGGCGGGAGATGCGCTGGTGCGGGAAAATTTACTCAGGGGCGACGGTCTC CCATGATCCGGAGCGAGTACAGGGTTTGGCCTCCATGCGCCGGCCTAACA CGGCAGGGGAGCTGATGCAGTTTCTCCAGGCGTCAAACTGGATGAGAACG TCGGTGCCAGAGCTGGCTGTGGTGGTGGAACCTCTGCGTGAGATGCTGGA GACGTTTCTAAACAACACTCGCCGGACGCGGCGTGCGGCGGACAAGATAG TCATAACAAGAGGAGACTGGACAGAGGAACGCGCGGCGGCGTGGGAG
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Coding sequence (CDS) from alignment at H-paniculata_contig14430:5539..6585+

>mRNA_H-paniculata_contig14430.2661.1 ID=mRNA_H-paniculata_contig14430.2661.1|Name=mRNA_H-paniculata_contig14430.2661.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1950bp|location=Sequence derived from alignment at H-paniculata_contig14430:5539..6585+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTGGAGTCGGCGATAGAAGAAGCGAGGACTGAGGGTTTGCCGCCGAACGG
AGTCACGGAGTTAAGAAAAATTGTGATGAACTCCCACTTCCATGCGTTTC
GGCGGGCGCTGAGCGGGGATCCACCGGCGGACGTGGAACCGCTGCGGATG
CATGTACCCGCGGACGCGCGAGCCGCCCGGGCGCGGCCGCGCCCGATGTC
GCGCGACAAGGCAGAATGGCTGGATAAACATTTCACGAAGCTGGCACAGG
CAGGTATGGTGTTCGCAAACCTCCAGGCAAGGTTCAGCAGCGTGGCGATG
GCAGTGCCCAAGAAGGACACCTATCGAATGGTGGCCGACTACCGCGCAGT
AAACAACCTGATCGCGCCGTCGGCGATGCCGATGCCAAACTTGGAGGAGA
TCGGGCGAGGCATGGCGGGAGCCAGTGTGTTCTGCACACTGGATCTGCTG
CAGGGCTACTGGCAGATGCCCCTCGATCCTCAAGCGCAAGAGATCTTCAC
GATGGTCACGGCCAAGGGGGTATACACGCCTACCAGAGTTCCTCAGGGAG
TGCTAAATGCGACTAGTTATTTCCAGGGGACGATGGGAGACGTACTGGCA
GGCTTGCTCGGAAAAATATGTGAAGTATGGGTTGATGACATAGGAATATG
GGCCGGTACGTGGCAGGAACTGATGCGGAGACTGCGGGTGGTGCTGGAGC
GGCTACAGGTACGCGTTGGAGTCGGCGATAGAAGAAGCGAGGACTGAGGG
TTTGCCGCCGAACGGAGTCACGGAGTTAAGAAAAATTGTGATGAACTCCC
ACTTCCATGCGTTTCGGCGGGCGCTGAGCGGGGATCCACCGGCGGACGTG
GAACCGCTGCGGATGCATGTACCCGCGGACGCGCGAGCCGCCCGGGCGCG
GCCGCGCCCGATGTCGCGCGACAAGGCAGAATGGCTGGATAAACATTTCA
CGAAGCTGGCACAGGCAGGTATGGTGTTCGCAAACCTCCAGGCAAGGTTC
AGCAGCGTGGCGATGGCAGTGCCCAAGAAGGACACCTATCGAATGGTGGC
CGACTACCGCGCAGTAAACAACCTGATCGCGCCGTCGGCGATGCCGATGC
CAAACTTGGAGGAGATCGGGCGAGGCATGGCGGGAGCCAGTGTGTTCTGC
ACACTGGATCTGCTGCAGGGCTACTGGCAGATGCCCCTCGATCCTCAAGC
GCAAGAGATCTTCACGATGGTCACGGCCAAGGGGGTATACACGCCTACCA
GAGTTCCTCAGGGAGTGCTAAATGCGACTAGTTATTTCCAGGGGACGATG
GGAGACGTACTGGCAGGCTTGCTCGGAAAAATATGTGAAGTATGGGTTGA
TGACATAGGAATATGGGCCGGTACGTGGCAGGAACTGATGCGGAGACTGC
GGGTGGTGCTGGAGCGGCTACAGGTACGCGGGGCGACGGTCTCCCATGAT
CCGGAGCGAGTACAGGGTTTGGCCTCCATGCGCCGGCCTAACACGGCAGG
GGAGCTGATGCAGTTTCTCCAGGCGTCAAACTGGATGAGAACGTCGGTGC
CAGAGCTGGCTGTGGTGGTGGAACCTCTGCGTGAGATGCTGGAGACGTTT
CTAAACAACACTCGCCGGACGCGGCGTGCGGCGGACAAGATAGTCATAAC
AAGAGGAGACTGGACAGAGGAACGCGCGGCGGCGTGGGAGGGGCGACGGT
CTCCCATGATCCGGAGCGAGTACAGGGTTTGGCCTCCATGCGCCGGCCTA
ACACGGCAGGGGAGCTGATGCAGTTTCTCCAGGCGTCAAACTGGATGAGA
ACGTCGGTGCCAGAGCTGGCTGTGGTGGTGGAACCTCTGCGTGAGATGCT
GGAGACGTTTCTAAACAACACTCGCCGGACGCGGCGTGCGGCGGACAAGA
TAGTCATAACAAGAGGAGACTGGACAGAGGAACGCGCGGCGGCGTGGGAG
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