prot_H-paniculata_contig1443.2660.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1443.2660.1
Unique Nameprot_H-paniculata_contig1443.2660.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length291
Homology
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BLAST of mRNA_H-paniculata_contig1443.2660.1 vs. uniprot
Match: D8LDI8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDI8_ECTSI)

HSP 1 Score: 209 bits (532), Expect = 6.780e-63
Identity = 134/202 (66.34%), Postives = 154/202 (76.24%), Query Frame = 0 
Query:   10 VAVTAEAFVAPSSFAGSSLA--GAPTRSSSMTKMTATDPVYSTIDAMEAEVAPA--GGGFWFGSAGFWGEEDYRGFVDSYKPDNLINGVYPLIDRVRATKILTTTSEAGLLSTLADAGLTLSQAEXXXXXXXXXXXXXXXXXNGPFLINMFGFLAVEPAKLAIPAVVSLLGTLKGLGLLNLGTIGDSAPPAAAKAAPVKAVK 207
            +AV AEAFV PS FAGS+L+   + + SSS  +M  ++      D +E  VAPA  GGGFWFGS+GFWGEEDYRGFVD YK DNLINGVYP+IDRVRATKILTTTSE+GLLS L DAGLTLS+AE XXXXXXXXXX      N   LIN+FGF+A+EPAKLAIPAVVS++  LKG GLL LG  GD+AP AA+   PVKA K
Sbjct:    1 MAVAAEAFVTPSGFAGSALSRVSSSSSSSSTIRMAESNAALEAFDELEQSVAPAPPGGGFWFGSSGFWGEEDYRGFVDGYKADNLINGVYPIIDRVRATKILTTTSESGLLSELEDAGLTLSEAEKXXXXXXXXXXLSFAADNLDVLINLFGFIAIEPAKLAIPAVVSVVKALKGAGLLKLGG-GDAAPVAAS---PVKATK 198
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1443.2660.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LDI8_ECTSI6.780e-6366.34Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009500Protein of unknown function DUF1118PFAMPF06549DUF1118coord: 101..149
e-value: 1.2E-5
score: 25.6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..290
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.621

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1443contigH-paniculata_contig1443:12845..23425 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1443.2660.1mRNA_H-paniculata_contig1443.2660.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1443 12214..24834 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1443.2660.1 ID=prot_H-paniculata_contig1443.2660.1|Name=mRNA_H-paniculata_contig1443.2660.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=291bp
MKTAMAFLAVAVTAEAFVAPSSFAGSSLAGAPTRSSSMTKMTATDPVYST
IDAMEAEVAPAGGGFWFGSAGFWGEEDYRGFVDSYKPDNLINGVYPLIDR
VRATKILTTTSEAGLLSTLADAGLTLSQAEKLLPALEEAGLLSFAADNGP
FLINMFGFLAVEPAKLAIPAVVSLLGTLKGLGLLNLGTIGDSAPPAAAKA
APVKAVKVANKPMAAKKAPVAAKVKAAPAPKQVAAKPRVTVSKVKVAPKP
KVAAPAKVVATPVVKKVVVKAKPAPVSPPKGNLANLPKAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009500DUF1118