mRNA_H-paniculata_contig14427.2658.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig14427.2658.1 vs. uniprot
Match: D7FP06_ECTSI (Chalcone Isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP06_ECTSI) HSP 1 Score: 160 bits (404), Expect = 2.040e-47 Identity = 82/101 (81.19%), Postives = 91/101 (90.10%), Query Frame = 1 Query: 1 SLMGTGVRVKKIGPAGVKVYAVGLYVDEKGAMKELDAHKGENADSLAKNEAFFSKAAKAKFEKTMVLKMAREVGTEKMVSALAESVKPRMSGSTKPLATFQ 303 SLMGTGVRVKKIGPAGVKVYAVGLYVDEK A KEL+ HKGE+ +SL KN+ FF++ AK+ FEKTMVLKMAREVGTEKMVSALAESVKPR+SGS KPL +FQ Sbjct: 55 SLMGTGVRVKKIGPAGVKVYAVGLYVDEKAAAKELEVHKGEDGESLGKNDGFFTRVAKSNFEKTMVLKMAREVGTEKMVSALAESVKPRISGSKKPLDSFQ 155
BLAST of mRNA_H-paniculata_contig14427.2658.1 vs. uniprot
Match: A0A835Z9G1_9STRA (Chalcone isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G1_9STRA) HSP 1 Score: 114 bits (285), Expect = 1.340e-29 Identity = 63/102 (61.76%), Postives = 74/102 (72.55%), Query Frame = 1 Query: 1 SLMGTGVRVKKIGPAGVKVYAVGLYVDEKGAMKELDAHKGENADSLAKNEAFFSKAAKAKFEKTMVLKMAREVGTEKMVSALAESVKPRMS-GSTKPLATFQ 303 SL GTGVRVKKIGPA KVYAVG+YVD A EL H + +L+K++AFF A A FEKT+VLKMAR+VG EKMV+ALAESVKPR++ G L FQ Sbjct: 42 SLAGTGVRVKKIGPAAFKVYAVGMYVDSAKARSELSKHSSTESRALSKSDAFFKDARSASFEKTLVLKMARKVGAEKMVNALAESVKPRLAPGGDAALEEFQ 143
BLAST of mRNA_H-paniculata_contig14427.2658.1 vs. uniprot
Match: A0A7R9YAW0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAW0_9STRA) HSP 1 Score: 101 bits (251), Expect = 1.800e-24 Identity = 54/101 (53.47%), Postives = 70/101 (69.31%), Query Frame = 1 Query: 1 SLMGTGVRVKKIGPAGVKVYAVGLYVDEKGAMKELDAHKGENADSLAKNEAFFSKAAKAKFEKTMVLKMAREVGTEKMVSALAESVKPRMSGSTKPLATFQ 303 +L GTGVRVKKIGP VKVYAVGLYVD++ L++ + ++L ++AFF KA F+K LKMAR VG EKMV+AL+ESV+PRM + L+ FQ Sbjct: 46 TLAGTGVRVKKIGPVAVKVYAVGLYVDQRAVQSSLNSFEAFPEETLLGSKAFFKAIRKAPFDKCFQLKMARTVGGEKMVNALSESVRPRMKSELEALSEFQ 146
BLAST of mRNA_H-paniculata_contig14427.2658.1 vs. uniprot
Match: A0A6S9FSE1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FSE1_HETAK) HSP 1 Score: 97.1 bits (240), Expect = 6.360e-23 Identity = 54/101 (53.47%), Postives = 69/101 (68.32%), Query Frame = 1 Query: 4 LMGTGVRVKKIGPAGVKVYAVGLYVDEKGAMKELDAHKG-ENADSLAKNEAFFSKAAKAKFEKTMVLKMAREVGTEKMVSALAESVKPRMSGSTKPLATFQ 303 L G GVRVK+IGP VKVY VG+Y+DE A++E+ + G + ADS FFS+ K +K +VLKMAR VG+E M ALAES+KPRMSG L++FQ Sbjct: 40 LAGVGVRVKQIGPLSVKVYGVGMYMDESSALEEISEYAGGKKADS-----GFFSRLRKPSIDKKIVLKMARSVGSETMSEALAESIKPRMSGDLPALSSFQ 135
BLAST of mRNA_H-paniculata_contig14427.2658.1 vs. uniprot
Match: A0A7S1XYD8_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYD8_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 1.190e-22 Identity = 50/100 (50.00%), Postives = 68/100 (68.00%), Query Frame = 1 Query: 4 LMGTGVRVKKIGPAGVKVYAVGLYVDEKGAMKELDAHKGENADSLAKNEAFFSKAAKAKFEKTMVLKMAREVGTEKMVSALAESVKPRMSGSTKPLATFQ 303 L G G R+K+IGP VKVYAVGLYVD++ L++ + ++L ++AFF KA FEK +LKMAR VG++KMV+ALA+S+KPRM + L FQ Sbjct: 49 LAGMGCRIKQIGPVKVKVYAVGLYVDQRAVQSSLNSFEAFPEETLLGSKAFFKAIRKAPFEKCFMLKMARTVGSDKMVNALADSIKPRMKNEMEALTEFQ 148
BLAST of mRNA_H-paniculata_contig14427.2658.1 vs. uniprot
Match: A0A7S0IHP3_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IHP3_9EUKA) HSP 1 Score: 68.6 bits (166), Expect = 6.240e-12 Identity = 43/96 (44.79%), Postives = 58/96 (60.42%), Query Frame = 1 Query: 16 GVRVKKIGPAGVKVYAVGLYVDEKGAMKELDAHKGENADSLAKNEAFFSKAAKAKFEKTMVLKMAREVGTEKMVSALAESVKPRMSGSTKPLATFQ 303 GV V+K GP +KVY +G+YVD G+ L +K ++A + + FF F KT++LKM V EKM ALAES+KPRMSGS +A F+ Sbjct: 48 GVGVRKKGP--IKVYGIGMYVDSLGSKMALSKYK-KHASAAELPKQFFEDVLGG-FGKTLLLKMVYGVSKEKMAGALAESIKPRMSGSLSAVAEFE 139
BLAST of mRNA_H-paniculata_contig14427.2658.1 vs. uniprot
Match: A0A7S0Q024_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q024_9EUKA) HSP 1 Score: 67.8 bits (164), Expect = 1.050e-11 Identity = 42/96 (43.75%), Postives = 56/96 (58.33%), Query Frame = 1 Query: 16 GVRVKKIGPAGVKVYAVGLYVDEKGAMKELDAHKGENADSLAKNEAFFSKAAKAKFEKTMVLKMAREVGTEKMVSALAESVKPRMSGSTKPLATFQ 303 GV V+K GP +KVY +G+YVD G+ L +K +S K A F + F KT+VLKM V EKM ALAES+KPRM+G ++ F+ Sbjct: 38 GVGVRKKGP--IKVYGIGMYVDAMGSKMSLSKYK--QHESALKLPASFFEDILGGFGKTLVLKMVYGVSKEKMAGALAESIKPRMTGGLAAVSEFE 129
BLAST of mRNA_H-paniculata_contig14427.2658.1 vs. uniprot
Match: A0A7S4J4F7_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4J4F7_9EUKA) HSP 1 Score: 65.1 bits (157), Expect = 1.210e-10 Identity = 42/101 (41.58%), Postives = 58/101 (57.43%), Query Frame = 1 Query: 1 SLMGTGVRVKKIGPAGVKVYAVGLYVDEKGAMKELDAHKGENADSLAKNEAFFSKAAKAKFEKTMVLKMAREVGTEKMVSALAESVKPRMSGSTKPLATFQ 303 SL+G GVR K GP +KVY VG+YVD + L K A+ + + +F+ + F KT+VLKM V EKM A+A+SVKPR+SG +A + Sbjct: 42 SLVGVGVRKK--GP--IKVYGVGMYVDGFASKMSLSKFKSTAAEKV--DSSFYKACVEGGFGKTLVLKMKFGVSKEKMAGAIADSVKPRISGDKSAVAKLE 136
BLAST of mRNA_H-paniculata_contig14427.2658.1 vs. uniprot
Match: A0A7V7MPQ1_9BACT (Chalcone_isomerase domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V7MPQ1_9BACT) HSP 1 Score: 60.5 bits (145), Expect = 1.220e-8 Identity = 37/87 (42.53%), Postives = 52/87 (59.77%), Query Frame = 1 Query: 4 LMGTGVRVKKIGPAGVKVYAVGLYVDEKGAMKELDAHKGENADSLAKNEAFFSKAAKAKFEKTMVLKMAREVGTEKMVSALAESVKP 264 L+G G+R K I G+KVYA+G Y+D A EL K N+ LAK+ F+ K AK +K++ L MAR+V E M A +S++P Sbjct: 73 LVGAGLRTKTI--FGIKVYAMGFYLDPDRAGSELVQFKQTNSKRLAKDGMFYKKLMDAKLDKSIRLVMARDVDAEDMREAFDDSLRP 157
BLAST of mRNA_H-paniculata_contig14427.2658.1 vs. uniprot
Match: A0A7S2S0W0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S0W0_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 2.230e-8 Identity = 37/95 (38.95%), Postives = 54/95 (56.84%), Query Frame = 1 Query: 1 SLMGTGVRVKKIGPAGVKVYAVGLYVDEKGAMKELDAHKGENAD-----SLAKNEAFFSKAAKAKFEKTMVLKMAREVGTEKMVSALAESVKPRM 270 SL+G GVRVKK+G V VYA+G++VD + + L+A K AD +L EAFFS+ + + AR V +++ ALAE +KP + Sbjct: 334 SLLGCGVRVKKLGMISVNVYALGIFVDAERSKPHLEAFKSGTADPRLFEALLSREAFFSRM--------LYMVFARSVSAKQVADALAEKLKPNL 420 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14427.2658.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig14427.2658.1 >prot_H-paniculata_contig14427.2658.1 ID=prot_H-paniculata_contig14427.2658.1|Name=mRNA_H-paniculata_contig14427.2658.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=99bp MGTGVRVKKIGPAGVKVYAVGLYVDEKGAMKELDAHKGENADSLAKNEAFback to top mRNA from alignment at H-paniculata_contig14427:151..5819- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig14427.2658.1 ID=mRNA_H-paniculata_contig14427.2658.1|Name=mRNA_H-paniculata_contig14427.2658.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5669bp|location=Sequence derived from alignment at H-paniculata_contig14427:151..5819- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig14427:151..5819- >mRNA_H-paniculata_contig14427.2658.1 ID=mRNA_H-paniculata_contig14427.2658.1|Name=mRNA_H-paniculata_contig14427.2658.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=594bp|location=Sequence derived from alignment at H-paniculata_contig14427:151..5819- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |